RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 ZCRB1Q8TBF4 217 aaKnown RBP13.55□□□□□ -0.24
CDK5RAP3-227ENST00000583352 DOT1LQ8TEK3 1739 aa13.55□□□□□ -0.24
CDK5RAP3-227ENST00000583352 QSER1Q2KHR3 1735 aa13.54□□□□□ -0.24
CDK5RAP3-227ENST00000583352 RGPD2P0DJD1 1756 aa13.54□□□□□ -0.24
CDK5RAP3-227ENST00000583352 POLD1P28340 1107 aa13.54□□□□□ -0.24
CDK5RAP3-227ENST00000583352 TMF1P82094 1093 aa13.54□□□□□ -0.24
CDK5RAP3-227ENST00000583352 SMG6Q86US8 1419 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP3-227ENST00000583352 MEGF6O75095 1541 aa13.54□□□□□ -0.24
CDK5RAP3-227ENST00000583352 RRS1Q15050 365 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP3-227ENST00000583352 GGNBP2Q9H3C7 697 aa13.53□□□□□ -0.24
CDK5RAP3-227ENST00000583352 TFCP2L1Q9NZI6 479 aa13.53□□□□□ -0.24
CDK5RAP3-227ENST00000583352 PNPLA7Q6ZV29 1317 aa13.53□□□□□ -0.24
CDK5RAP3-227ENST00000583352 SHANK3Q9BYB0 1731 aa13.53□□□□□ -0.24
CDK5RAP3-227ENST00000583352 FYB1O15117 783 aa13.52□□□□□ -0.25
CDK5RAP3-227ENST00000583352 KLHL34Q8N239 644 aa13.52□□□□□ -0.25
CDK5RAP3-227ENST00000583352 ZNF784Q8NCA9 323 aaPredicted RBP13.52□□□□□ -0.25
CDK5RAP3-227ENST00000583352 CGNL1Q0VF96 1302 aa13.52□□□□□ -0.25
CDK5RAP3-227ENST00000583352 NSD2O96028 1365 aa13.52□□□□□ -0.25
CDK5RAP3-227ENST00000583352 USP47Q96K76 1375 aa13.52□□□□□ -0.25
CDK5RAP3-227ENST00000583352 LY75O60449 1722 aa13.52□□□□□ -0.25
CDK5RAP3-227ENST00000583352 KCNQ4P56696 695 aa13.51□□□□□ -0.25
CDK5RAP3-227ENST00000583352 NBPF6Q5VWK0 638 aa13.51□□□□□ -0.25
CDK5RAP3-227ENST00000583352 RAPGEF4Q8WZA2 1011 aa13.51□□□□□ -0.25
CDK5RAP3-227ENST00000583352 NBPF4Q96M43 638 aa13.51□□□□□ -0.25
CDK5RAP3-227ENST00000583352 CCNL1Q9UK58 526 aaPredicted RBP13.51□□□□□ -0.25
CDK5RAP3-227ENST00000583352 TIMELESSQ9UNS1 1208 aa13.51□□□□□ -0.25
CDK5RAP3-227ENST00000583352 CHD4Q14839 1912 aa13.51□□□□□ -0.25
CDK5RAP3-227ENST00000583352 TATP17735 454 aaPredicted RBP13.5□□□□□ -0.25
CDK5RAP3-227ENST00000583352 GPR162Q16538 588 aa13.5□□□□□ -0.25
CDK5RAP3-227ENST00000583352 CDCA8Q53HL2 280 aa13.5□□□□□ -0.25
CDK5RAP3-227ENST00000583352 USHBP1Q8N6Y0 703 aa13.5□□□□□ -0.25
CDK5RAP3-227ENST00000583352 TUBGCP6Q96RT7 1819 aa13.5□□□□□ -0.25
CDK5RAP3-227ENST00000583352 COL24A1Q17RW2 1714 aa13.49□□□□□ -0.25
CDK5RAP3-227ENST00000583352 KIF20BQ96Q89 1820 aa13.48□□□□□ -0.25
CDK5RAP3-227ENST00000583352 INSRP06213 1382 aa13.48□□□□□ -0.25
CDK5RAP3-227ENST00000583352 FLT4P35916 1363 aa13.48□□□□□ -0.25
CDK5RAP3-227ENST00000583352 KIF24Q5T7B8 1368 aa13.47□□□□□ -0.25
CDK5RAP3-227ENST00000583352 PCDH11XQ9BZA7 1347 aa13.47□□□□□ -0.25
CDK5RAP3-227ENST00000583352 PCDH11YQ9BZA8 1340 aa13.47□□□□□ -0.25
CDK5RAP3-227ENST00000583352 MSH5O43196 834 aa13.47□□□□□ -0.25
CDK5RAP3-227ENST00000583352 HMGB2P26583 209 aaKnown RBP13.47□□□□□ -0.25
CDK5RAP3-227ENST00000583352 HSP90AB2PQ58FF8 381 aa13.47□□□□□ -0.25
CDK5RAP3-227ENST00000583352 ZNF316A6NFI3 1004 aaPredicted RBP13.46□□□□□ -0.25
CDK5RAP3-227ENST00000583352 PELP1Q8IZL8 1130 aaKnown RBP13.46□□□□□ -0.25
CDK5RAP3-227ENST00000583352 COL23A1Q86Y22 540 aaPredicted RBP13.45□□□□□ -0.26
CDK5RAP3-227ENST00000583352 NSD3Q9BZ95 1437 aa13.44□□□□□ -0.26
CDK5RAP3-227ENST00000583352 PALLDQ8WX93 1383 aa13.44□□□□□ -0.26
CDK5RAP3-227ENST00000583352 C5P01031 1676 aa13.44□□□□□ -0.26
CDK5RAP3-227ENST00000583352 MPRIPQ6WCQ1 1025 aa13.43□□□□□ -0.26
CDK5RAP3-227ENST00000583352 FLAD1Q8NFF5 587 aa13.43□□□□□ -0.26
CDK5RAP3-227ENST00000583352 NLGN2Q8NFZ4 835 aa13.43□□□□□ -0.26
CDK5RAP3-227ENST00000583352 EMILIN1Q9Y6C2 1016 aa13.43□□□□□ -0.26
CDK5RAP3-227ENST00000583352 CYP27B1O15528 508 aa13.42□□□□□ -0.26
CDK5RAP3-227ENST00000583352 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
CDK5RAP3-227ENST00000583352 CARD14Q9BXL6 1004 aa13.42□□□□□ -0.26
CDK5RAP3-227ENST00000583352 PPM1GO15355 546 aaPredicted RBP13.41□□□□□ -0.26
CDK5RAP3-227ENST00000583352 GRIN3BO60391 1043 aa13.41□□□□□ -0.26
CDK5RAP3-227ENST00000583352 MSL1Q68DK7 614 aa13.41□□□□□ -0.26
CDK5RAP3-227ENST00000583352 PKD1L3Q7Z443 1732 aa13.41□□□□□ -0.26
CDK5RAP3-227ENST00000583352 C1QTNF8P60827 252 aa13.4□□□□□ -0.26
CDK5RAP3-227ENST00000583352 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
CDK5RAP3-227ENST00000583352 TAF1LQ8IZX4 1826 aa13.4□□□□□ -0.26
CDK5RAP3-227ENST00000583352 NCAPD2Q15021 1401 aa13.39□□□□□ -0.27
CDK5RAP3-227ENST00000583352 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
CDK5RAP3-227ENST00000583352 ITGB4P16144 1822 aa13.39□□□□□ -0.27
CDK5RAP3-227ENST00000583352 SENP3-EIF4A1A0A087X0R7 540 aa13.39□□□□□ -0.27
CDK5RAP3-227ENST00000583352 AK7Q96M32 723 aa13.39□□□□□ -0.27
CDK5RAP3-227ENST00000583352 WASHC2AQ641Q2 1341 aa13.39□□□□□ -0.27
CDK5RAP3-227ENST00000583352 YBX3P16989 372 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDK5RAP3-227ENST00000583352 NKX1-1Q15270 411 aaPredicted RBP13.38□□□□□ -0.27
CDK5RAP3-227ENST00000583352 PIGBQ92521 554 aa13.38□□□□□ -0.27
CDK5RAP3-227ENST00000583352 CD2APQ9Y5K6 639 aa13.38□□□□□ -0.27
CDK5RAP3-227ENST00000583352 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
CDK5RAP3-227ENST00000583352 ANKRD26Q9UPS8 1709 aa13.38□□□□□ -0.27
CDK5RAP3-227ENST00000583352 GIGYF1O75420 1035 aaPredicted RBP13.37□□□□□ -0.27
CDK5RAP3-227ENST00000583352 EYA1Q99502 592 aa13.36□□□□□ -0.27
CDK5RAP3-227ENST00000583352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.36□□□□□ -0.271e-9■□□□□ 10.6
CDK5RAP3-227ENST00000583352 MAP2P11137 1827 aaKnown RBP13.36□□□□□ -0.27
CDK5RAP3-227ENST00000583352 PHF14O94880 888 aa13.35□□□□□ -0.27
CDK5RAP3-227ENST00000583352 IFNL2Q8IZJ0 200 aa13.35□□□□□ -0.27
CDK5RAP3-227ENST00000583352 POLR3GLQ9BT43 218 aa13.35□□□□□ -0.27
CDK5RAP3-227ENST00000583352 TMOD3Q9NYL9 352 aa13.35□□□□□ -0.27
CDK5RAP3-227ENST00000583352 POLKQ9UBT6 870 aa13.35□□□□□ -0.27
CDK5RAP3-227ENST00000583352 UBR3Q6ZT12 1888 aa13.34□□□□□ -0.27
CDK5RAP3-227ENST00000583352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.34□□□□□ -0.27
CDK5RAP3-227ENST00000583352 LOC102724428A0A0B4J2F2 783 aa13.34□□□□□ -0.27
CDK5RAP3-227ENST00000583352 SSFA2P28290 1259 aa13.34□□□□□ -0.27
CDK5RAP3-227ENST00000583352 SIK1P57059 783 aa13.34□□□□□ -0.27
CDK5RAP3-227ENST00000583352 PHKG2P15735 406 aa13.33□□□□□ -0.28
CDK5RAP3-227ENST00000583352 ATP6V1AP38606 617 aa13.32□□□□□ -0.28
CDK5RAP3-227ENST00000583352 TNNT2P45379 298 aaPredicted RBP13.32□□□□□ -0.28
CDK5RAP3-227ENST00000583352 AMIGO3Q86WK7 504 aa13.32□□□□□ -0.28
CDK5RAP3-227ENST00000583352 LINC00116Q8NCU8 138 aa13.32□□□□□ -0.28
CDK5RAP3-227ENST00000583352 ASAP1Q9ULH1 1129 aa13.32□□□□□ -0.28
CDK5RAP3-227ENST00000583352 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
CDK5RAP3-227ENST00000583352 GNPATO15228 680 aa13.31□□□□□ -0.28
CDK5RAP3-227ENST00000583352 EIF4A2Q14240 407 aaKnown RBP13.31□□□□□ -0.28
CDK5RAP3-227ENST00000583352 SMIM5Q71RC9 77 aa13.31□□□□□ -0.28
CDK5RAP3-227ENST00000583352 ATP10DQ9P241 1426 aa13.3□□□□□ -0.28
CDK5RAP3-227ENST00000583352 ITPK1Q13572 414 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms