RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 DDX54Q8TDD1 881 aaKnown RBP19.53■□□□□ 0.72
ERBB2-213ENST00000582818 AKT1S1Q96B36 256 aa19.53■□□□□ 0.72
ERBB2-213ENST00000582818 LRRC4BQ9NT99 713 aa19.53■□□□□ 0.72
ERBB2-213ENST00000582818 LY75O60449 1722 aa19.53■□□□□ 0.72
ERBB2-213ENST00000582818 RGPD2P0DJD1 1756 aa19.52■□□□□ 0.72
ERBB2-213ENST00000582818 SHANK3Q9BYB0 1731 aa19.52■□□□□ 0.72
ERBB2-213ENST00000582818 FYB1O15117 783 aa19.52■□□□□ 0.72
ERBB2-213ENST00000582818 LTV1Q96GA3 475 aaPredicted RBP19.52■□□□□ 0.72
ERBB2-213ENST00000582818 ARXQ96QS3 562 aa19.52■□□□□ 0.72
ERBB2-213ENST00000582818 FHDC1Q9C0D6 1143 aaPredicted RBP19.52■□□□□ 0.72
ERBB2-213ENST00000582818 SMG6Q86US8 1419 aaKnown RBP19.51■□□□□ 0.71
ERBB2-213ENST00000582818 USP47Q96K76 1375 aa19.51■□□□□ 0.71
ERBB2-213ENST00000582818 DOT1LQ8TEK3 1739 aa19.5■□□□□ 0.71
ERBB2-213ENST00000582818 KIF20BQ96Q89 1820 aa19.49■□□□□ 0.71
ERBB2-213ENST00000582818 ZNF827Q17R98 1081 aa19.49■□□□□ 0.71
ERBB2-213ENST00000582818 INSRP06213 1382 aa19.48■□□□□ 0.71
ERBB2-213ENST00000582818 PRIM1P49642 420 aaKnown RBP19.48■□□□□ 0.71
ERBB2-213ENST00000582818 MEGF6O75095 1541 aa19.47■□□□□ 0.71
ERBB2-213ENST00000582818 EIF4G2P78344 907 aaKnown RBP eCLIP19.47■□□□□ 0.71
ERBB2-213ENST00000582818 RAPGEF4Q8WZA2 1011 aa19.47■□□□□ 0.71
ERBB2-213ENST00000582818 NSD2O96028 1365 aa19.46■□□□□ 0.71
ERBB2-213ENST00000582818 FLT4P35916 1363 aa19.46■□□□□ 0.71
ERBB2-213ENST00000582818 NBPF6Q5VWK0 638 aa19.46■□□□□ 0.71
ERBB2-213ENST00000582818 NBPF4Q96M43 638 aa19.46■□□□□ 0.71
ERBB2-213ENST00000582818 POLD1P28340 1107 aa19.45■□□□□ 0.7
ERBB2-213ENST00000582818 RRS1Q15050 365 aaKnown RBP19.45■□□□□ 0.7
ERBB2-213ENST00000582818 SYTL4Q96C24 671 aaPredicted RBP19.45■□□□□ 0.7
ERBB2-213ENST00000582818 GGNBP2Q9H3C7 697 aa19.45■□□□□ 0.7
ERBB2-213ENST00000582818 TFCP2L1Q9NZI6 479 aa19.45■□□□□ 0.7
ERBB2-213ENST00000582818 TUBGCP6Q96RT7 1819 aa19.45■□□□□ 0.7
ERBB2-213ENST00000582818 FBLN1P23142 703 aa19.44■□□□□ 0.7
ERBB2-213ENST00000582818 PNPLA7Q6ZV29 1317 aa19.44■□□□□ 0.7
ERBB2-213ENST00000582818 TATP17735 454 aaPredicted RBP19.43■□□□□ 0.7
ERBB2-213ENST00000582818 PCDH11XQ9BZA7 1347 aa19.43■□□□□ 0.7
ERBB2-213ENST00000582818 PCDH11YQ9BZA8 1340 aa19.43■□□□□ 0.7
ERBB2-213ENST00000582818 ZEB1P37275 1124 aaPredicted RBP19.42■□□□□ 0.7
ERBB2-213ENST00000582818 CCNL1Q9UK58 526 aaPredicted RBP19.42■□□□□ 0.7
ERBB2-213ENST00000582818 HSP90AB2PQ58FF8 381 aa19.4■□□□□ 0.7
ERBB2-213ENST00000582818 GOLGB1Q14789 3259 aaKnown RBP19.4■□□□□ 0.7
ERBB2-213ENST00000582818 ANKRD26Q9UPS8 1709 aa19.39■□□□□ 0.7
ERBB2-213ENST00000582818 ZNF784Q8NCA9 323 aaPredicted RBP19.39■□□□□ 0.69
ERBB2-213ENST00000582818 NCAPD2Q15021 1401 aa19.39■□□□□ 0.69
ERBB2-213ENST00000582818 PKD1L3Q7Z443 1732 aa19.38■□□□□ 0.69
ERBB2-213ENST00000582818 TAF1LQ8IZX4 1826 aa19.38■□□□□ 0.69
ERBB2-213ENST00000582818 FLAD1Q8NFF5 587 aa19.38■□□□□ 0.69
ERBB2-213ENST00000582818 MAP2P11137 1827 aaKnown RBP19.37■□□□□ 0.69
ERBB2-213ENST00000582818 C5P01031 1676 aa19.37■□□□□ 0.69
ERBB2-213ENST00000582818 PLEKHG2Q9H7P9 1386 aa19.37■□□□□ 0.69
ERBB2-213ENST00000582818 CARD14Q9BXL6 1004 aa19.37■□□□□ 0.69
ERBB2-213ENST00000582818 ITGB4P16144 1822 aa19.37■□□□□ 0.69
ERBB2-213ENST00000582818 USHBP1Q8N6Y0 703 aa19.36■□□□□ 0.69
ERBB2-213ENST00000582818 SMARCC1Q92922 1105 aaPredicted RBP19.36■□□□□ 0.69
ERBB2-213ENST00000582818 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.36■□□□□ 0.69
ERBB2-213ENST00000582818 NSD3Q9BZ95 1437 aa19.35■□□□□ 0.69
ERBB2-213ENST00000582818 WASHC2AQ641Q2 1341 aa19.35■□□□□ 0.69
ERBB2-213ENST00000582818 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
ERBB2-213ENST00000582818 NKX1-1Q15270 411 aaPredicted RBP19.35■□□□□ 0.69
ERBB2-213ENST00000582818 GPR162Q16538 588 aa19.35■□□□□ 0.69
ERBB2-213ENST00000582818 KCNQ4P56696 695 aa19.34■□□□□ 0.69
ERBB2-213ENST00000582818 CYP27B1O15528 508 aa19.33■□□□□ 0.68
ERBB2-213ENST00000582818 SPG7Q9UQ90 795 aa19.33■□□□□ 0.68
ERBB2-213ENST00000582818 PALLDQ8WX93 1383 aa19.32■□□□□ 0.68
ERBB2-213ENST00000582818 COL23A1Q86Y22 540 aaPredicted RBP19.32■□□□□ 0.68
ERBB2-213ENST00000582818 EMILIN1Q9Y6C2 1016 aa19.31■□□□□ 0.68
ERBB2-213ENST00000582818 GRIN3BO60391 1043 aa19.3■□□□□ 0.68
ERBB2-213ENST00000582818 MPRIPQ6WCQ1 1025 aa19.3■□□□□ 0.68
ERBB2-213ENST00000582818 TOGARAM1Q9Y4F4 1720 aa19.3■□□□□ 0.68
ERBB2-213ENST00000582818 CD2APQ9Y5K6 639 aa19.29■□□□□ 0.68
ERBB2-213ENST00000582818 MSH5O43196 834 aa19.28■□□□□ 0.68
ERBB2-213ENST00000582818 UBR3Q6ZT12 1888 aa19.28■□□□□ 0.68
ERBB2-213ENST00000582818 C4BP0C0L5 1744 aa19.28■□□□□ 0.68
ERBB2-213ENST00000582818 KLHL34Q8N239 644 aa19.26■□□□□ 0.67
ERBB2-213ENST00000582818 PIGBQ92521 554 aa19.26■□□□□ 0.67
ERBB2-213ENST00000582818 EYA1Q99502 592 aa19.26■□□□□ 0.67
ERBB2-213ENST00000582818 POLKQ9UBT6 870 aa19.26■□□□□ 0.67
ERBB2-213ENST00000582818 PPM1GO15355 546 aaPredicted RBP19.25■□□□□ 0.67
ERBB2-213ENST00000582818 NLGN2Q8NFZ4 835 aa19.25■□□□□ 0.67
ERBB2-213ENST00000582818 AK7Q96M32 723 aa19.25■□□□□ 0.67
ERBB2-213ENST00000582818 SSFA2P28290 1259 aa19.24■□□□□ 0.67
ERBB2-213ENST00000582818 IFNL2Q8IZJ0 200 aa19.24■□□□□ 0.67
ERBB2-213ENST00000582818 TMOD3Q9NYL9 352 aa19.23■□□□□ 0.67
ERBB2-213ENST00000582818 ZNF831Q5JPB2 1677 aa19.23■□□□□ 0.67
ERBB2-213ENST00000582818 LOC102724428A0A0B4J2F2 783 aa19.22■□□□□ 0.67
ERBB2-213ENST00000582818 SIK1P57059 783 aa19.22■□□□□ 0.67
ERBB2-213ENST00000582818 C1QTNF8P60827 252 aa19.22■□□□□ 0.67
ERBB2-213ENST00000582818 PHKG2P15735 406 aa19.21■□□□□ 0.67
ERBB2-213ENST00000582818 PELP1Q8IZL8 1130 aaKnown RBP19.21■□□□□ 0.67
ERBB2-213ENST00000582818 ERVV-2B6SEH9 535 aa19.19■□□□□ 0.66
ERBB2-213ENST00000582818 HSP90AB1P08238 724 aaKnown RBP19.19■□□□□ 0.66
ERBB2-213ENST00000582818 YBX3P16989 372 aaKnown RBP eCLIP19.19■□□□□ 0.66
ERBB2-213ENST00000582818 EIF4A2Q14240 407 aaKnown RBP19.19■□□□□ 0.66
ERBB2-213ENST00000582818 MSL1Q68DK7 614 aa19.19■□□□□ 0.66
ERBB2-213ENST00000582818 IGSF1Q8N6C5 1336 aa19.19■□□□□ 0.66
ERBB2-213ENST00000582818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.18■□□□□ 0.66
ERBB2-213ENST00000582818 GIGYF1O75420 1035 aaPredicted RBP19.17■□□□□ 0.66
ERBB2-213ENST00000582818 AMOTQ4VCS5 1084 aa19.16■□□□□ 0.66
ERBB2-213ENST00000582818 DCAF5Q96JK2 942 aa19.16■□□□□ 0.66
ERBB2-213ENST00000582818 POLR3GLQ9BT43 218 aa19.16■□□□□ 0.66
ERBB2-213ENST00000582818 ASAP1Q9ULH1 1129 aa19.16■□□□□ 0.66
ERBB2-213ENST00000582818 ATP6V1AP38606 617 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms