RNA–Protein interactions for RNA: ENST00000582276.1

PGAP3-208, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 4

Gene PGAP3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-208ENST00000582276 SULT6B1Q6IMI4 303 aa24.48■■□□□ 1.51
PGAP3-208ENST00000582276 CCDC125Q86Z20 511 aa24.48■■□□□ 1.51
PGAP3-208ENST00000582276 AEBP1Q8IUX7 1158 aa24.48■■□□□ 1.51
PGAP3-208ENST00000582276 COL3A1P02461 1466 aaPredicted RBP24.47■■□□□ 1.51
PGAP3-208ENST00000582276 U2SURPO15042 1029 aaKnown RBP24.47■■□□□ 1.51
PGAP3-208ENST00000582276 RGPD1P0DJD0 1748 aa24.46■■□□□ 1.51
PGAP3-208ENST00000582276 HMOX1P09601 288 aa24.45■■□□□ 1.5
PGAP3-208ENST00000582276 SPG7Q9UQ90 795 aa24.44■■□□□ 1.5
PGAP3-208ENST00000582276 PCDH11XQ9BZA7 1347 aa24.43■■□□□ 1.5
PGAP3-208ENST00000582276 PCDH11YQ9BZA8 1340 aa24.43■■□□□ 1.5
PGAP3-208ENST00000582276 PRKRIP1Q9H875 184 aaPredicted RBP24.43■■□□□ 1.5
PGAP3-208ENST00000582276 NUDCQ9Y266 331 aa24.43■■□□□ 1.5
PGAP3-208ENST00000582276 MYBBP1AQ9BQG0 1328 aaKnown RBP24.42■■□□□ 1.5
PGAP3-208ENST00000582276 SHANK3Q9BYB0 1731 aa24.42■■□□□ 1.5
PGAP3-208ENST00000582276 ACSBG1Q96GR2 724 aa24.42■■□□□ 1.5
PGAP3-208ENST00000582276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.4■■□□□ 1.5
PGAP3-208ENST00000582276 BCL9O00512 1426 aa24.4■■□□□ 1.5
PGAP3-208ENST00000582276 PKD1L3Q7Z443 1732 aa24.4■■□□□ 1.5
PGAP3-208ENST00000582276 KDRP35968 1356 aa24.4■■□□□ 1.5
PGAP3-208ENST00000582276 SBF2Q86WG5 1849 aa24.4■■□□□ 1.5
PGAP3-208ENST00000582276 CYP27B1O15528 508 aa24.39■■□□□ 1.49
PGAP3-208ENST00000582276 PLEKHO1Q53GL0 409 aaPredicted RBP24.39■■□□□ 1.49
PGAP3-208ENST00000582276 KAT6BQ8WYB5 2073 aa24.39■■□□□ 1.49
PGAP3-208ENST00000582276 APBA3O96018 575 aa24.38■■□□□ 1.49
PGAP3-208ENST00000582276 DEFB132Q7Z7B7 95 aa24.38■■□□□ 1.49
PGAP3-208ENST00000582276 KCNQ2O43526 872 aa24.37■■□□□ 1.49
PGAP3-208ENST00000582276 U2AF1L5P0DN76 240 aaPredicted RBP24.37■■□□□ 1.49
PGAP3-208ENST00000582276 BAG6P46379 1132 aa24.37■■□□□ 1.49
PGAP3-208ENST00000582276 U2AF1Q01081 240 aaKnown RBP eCLIP24.37■■□□□ 1.49
PGAP3-208ENST00000582276 PTF1AQ7RTS3 328 aa24.37■■□□□ 1.49
PGAP3-208ENST00000582276 BCL11BQ9C0K0 894 aaPredicted RBP24.37■■□□□ 1.49
PGAP3-208ENST00000582276 TNS1Q9HBL0 1735 aaKnown RBP24.36■■□□□ 1.49
PGAP3-208ENST00000582276 AMOTQ4VCS5 1084 aa24.36■■□□□ 1.49
PGAP3-208ENST00000582276 PLEKHG2Q9H7P9 1386 aa24.35■■□□□ 1.49
PGAP3-208ENST00000582276 IFNL2Q8IZJ0 200 aa24.35■■□□□ 1.49
PGAP3-208ENST00000582276 SYTL4Q96C24 671 aaPredicted RBP24.35■■□□□ 1.49
PGAP3-208ENST00000582276 EN1Q05925 392 aaPredicted RBP24.34■■□□□ 1.49
PGAP3-208ENST00000582276 ZNF530Q6P9A1 599 aaPredicted RBP24.34■■□□□ 1.49
PGAP3-208ENST00000582276 PHKG2P15735 406 aa24.33■■□□□ 1.49
PGAP3-208ENST00000582276 ANP32CO43423 234 aa24.32■■□□□ 1.48
PGAP3-208ENST00000582276 PRIM1P49642 420 aaKnown RBP24.32■■□□□ 1.48
PGAP3-208ENST00000582276 NHSQ6T4R5 1651 aa24.31■■□□□ 1.48
PGAP3-208ENST00000582276 C1orf141Q5JVX7 400 aa24.31■■□□□ 1.48
PGAP3-208ENST00000582276 DOT1LQ8TEK3 1739 aa24.31■■□□□ 1.48
PGAP3-208ENST00000582276 PRKAR2BP31323 418 aa24.3■■□□□ 1.48
PGAP3-208ENST00000582276 NKX1-1Q15270 411 aaPredicted RBP24.29■■□□□ 1.48
PGAP3-208ENST00000582276 RSPH6AQ9H0K4 717 aa24.29■■□□□ 1.48
PGAP3-208ENST00000582276 EZH2Q15910 746 aaKnown RBP24.28■■□□□ 1.48
PGAP3-208ENST00000582276 FCHSD2O94868 740 aa24.27■■□□□ 1.48
PGAP3-208ENST00000582276 HSP90AB1P08238 724 aaKnown RBP24.27■■□□□ 1.48
PGAP3-208ENST00000582276 MTHFSDQ2M296 383 aaKnown RBP24.27■■□□□ 1.48
PGAP3-208ENST00000582276 CAMKK2Q96RR4 588 aa24.27■■□□□ 1.48
PGAP3-208ENST00000582276 MPRIPQ6WCQ1 1025 aa24.25■■□□□ 1.47
PGAP3-208ENST00000582276 BTAF1O14981 1849 aa24.25■■□□□ 1.47
PGAP3-208ENST00000582276 PLSCR1O15162 318 aa24.24■■□□□ 1.47
PGAP3-208ENST00000582276 AKAP4Q5JQC9 854 aa24.24■■□□□ 1.47
PGAP3-208ENST00000582276 DCAF5Q96JK2 942 aa24.24■■□□□ 1.47
PGAP3-208ENST00000582276 PHACTR3Q96KR7 559 aa24.24■■□□□ 1.47
PGAP3-208ENST00000582276 TOGARAM1Q9Y4F4 1720 aa24.24■■□□□ 1.47
PGAP3-208ENST00000582276 WDR43Q15061 677 aaKnown RBP eCLIP24.22■■□□□ 1.47
PGAP3-208ENST00000582276 GAS2L2Q8NHY3 880 aa24.22■■□□□ 1.47
PGAP3-208ENST00000582276 NEFMP07197 916 aa24.21■■□□□ 1.47
PGAP3-208ENST00000582276 ITGB4P16144 1822 aa24.21■■□□□ 1.47
PGAP3-208ENST00000582276 TMOD3Q9NYL9 352 aa24.2■■□□□ 1.46
PGAP3-208ENST00000582276 KDM6AO15550 1401 aaPredicted RBP24.19■■□□□ 1.46
PGAP3-208ENST00000582276 ERVV-2B6SEH9 535 aa24.19■■□□□ 1.46
PGAP3-208ENST00000582276 PIGBQ92521 554 aa24.19■■□□□ 1.46
PGAP3-208ENST00000582276 PNNQ9H307 717 aaKnown RBP24.19■■□□□ 1.46
PGAP3-208ENST00000582276 CABP4P57796 275 aa24.18■■□□□ 1.46
PGAP3-208ENST00000582276 CCDC184Q52MB2 194 aa24.17■■□□□ 1.46
PGAP3-208ENST00000582276 LGR6Q9HBX8 967 aa24.17■■□□□ 1.46
PGAP3-208ENST00000582276 RGPD3A6NKT7 1758 aaPredicted RBP24.16■■□□□ 1.46
PGAP3-208ENST00000582276 RGPD4Q7Z3J3 1758 aa24.16■■□□□ 1.46
PGAP3-208ENST00000582276 GNAT3A8MTJ3 354 aa24.16■■□□□ 1.46
PGAP3-208ENST00000582276 TXNRD1Q16881 649 aa24.16■■□□□ 1.46
PGAP3-208ENST00000582276 PROM2Q8N271 834 aa24.16■■□□□ 1.46
PGAP3-208ENST00000582276 PLEKHF1Q96S99 279 aa24.16■■□□□ 1.46
PGAP3-208ENST00000582276 MAP3K5Q99683 1374 aa24.16■■□□□ 1.46
PGAP3-208ENST00000582276 MAPK8IP3Q9UPT6 1336 aa24.15■■□□□ 1.46
PGAP3-208ENST00000582276 RNMTO43148 476 aaKnown RBP24.15■■□□□ 1.46
PGAP3-208ENST00000582276 RREB1Q92766 1687 aa24.15■■□□□ 1.46
PGAP3-208ENST00000582276 ADAMTS8Q9UP79 889 aa24.14■■□□□ 1.45
PGAP3-208ENST00000582276 SCN11AQ9UI33 1791 aa24.14■■□□□ 1.45
PGAP3-208ENST00000582276 NFATC2IPQ8NCF5 419 aa24.13■■□□□ 1.45
PGAP3-208ENST00000582276 MRS2Q9HD23 443 aa24.13■■□□□ 1.45
PGAP3-208ENST00000582276 CCDC146Q8IYE0 955 aa24.12■■□□□ 1.45
PGAP3-208ENST00000582276 SMARCC1Q92922 1105 aaPredicted RBP24.12■■□□□ 1.45
PGAP3-208ENST00000582276 NUP188Q5SRE5 1749 aa24.11■■□□□ 1.45
PGAP3-208ENST00000582276 ASAP1Q9ULH1 1129 aa24.11■■□□□ 1.45
PGAP3-208ENST00000582276 PALLDQ8WX93 1383 aa24.11■■□□□ 1.45
PGAP3-208ENST00000582276 VIRMAQ69YN4 1812 aaKnown RBP24.1■■□□□ 1.45
PGAP3-208ENST00000582276 KCNQ4P56696 695 aa24.1■■□□□ 1.45
PGAP3-208ENST00000582276 NBPF14Q5TI25 921 aa24.1■■□□□ 1.45
PGAP3-208ENST00000582276 RTF1Q92541 710 aaKnown RBP24.1■■□□□ 1.45
PGAP3-208ENST00000582276 SLC52A2Q9HAB3 445 aa24.1■■□□□ 1.45
PGAP3-208ENST00000582276 SLC27A3Q5K4L6 730 aa24.09■■□□□ 1.45
PGAP3-208ENST00000582276 IL17REQ8NFR9 667 aa24.09■■□□□ 1.45
PGAP3-208ENST00000582276 NFE2L2Q16236 605 aa24.08■■□□□ 1.45
PGAP3-208ENST00000582276 ATG3Q9NT62 314 aa24.08■■□□□ 1.45
PGAP3-208ENST00000582276 LRRC4BQ9NT99 713 aa24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms