RNA–Protein interactions for RNA: ENST00000582275.5

CDK5RAP3-224, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 442 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-224ENST00000582275 NLRP2Q9NX02 1062 aa12.67□□□□□ -0.38
CDK5RAP3-224ENST00000582275 TTC21BQ7Z4L5 1316 aa12.66□□□□□ -0.38
CDK5RAP3-224ENST00000582275 SOX12O15370 315 aa12.66□□□□□ -0.38
CDK5RAP3-224ENST00000582275 CD2APQ9Y5K6 639 aa12.66□□□□□ -0.38
CDK5RAP3-224ENST00000582275 ERBB3P21860 1342 aa12.65□□□□□ -0.38
CDK5RAP3-224ENST00000582275 EVC2Q86UK5 1308 aa12.65□□□□□ -0.38
CDK5RAP3-224ENST00000582275 APLP1P51693 650 aa12.65□□□□□ -0.38
CDK5RAP3-224ENST00000582275 ADCY9O60503 1353 aa12.65□□□□□ -0.38
CDK5RAP3-224ENST00000582275 RAB3GAP2Q9H2M9 1393 aa12.64□□□□□ -0.39
CDK5RAP3-224ENST00000582275 NFAT5O94916 1531 aa12.63□□□□□ -0.39
CDK5RAP3-224ENST00000582275 NBPF1Q3BBV0 1214 aa12.62□□□□□ -0.39
CDK5RAP3-224ENST00000582275 FLAD1Q8NFF5 587 aa12.62□□□□□ -0.39
CDK5RAP3-224ENST00000582275 ZNF526Q8TF50 670 aaPredicted RBP12.62□□□□□ -0.39
CDK5RAP3-224ENST00000582275 ANKRD36BQ8N2N9 1353 aa12.6□□□□□ -0.39
CDK5RAP3-224ENST00000582275 DDX54Q8TDD1 881 aaKnown RBP12.6□□□□□ -0.39
CDK5RAP3-224ENST00000582275 ANKRD24Q8TF21 1146 aa12.6□□□□□ -0.39
CDK5RAP3-224ENST00000582275 SYTL4Q96C24 671 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-224ENST00000582275 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
CDK5RAP3-224ENST00000582275 USP31Q70CQ4 1352 aa12.59□□□□□ -0.39
CDK5RAP3-224ENST00000582275 KTN1Q86UP2 1357 aaKnown RBP12.59□□□□□ -0.39
CDK5RAP3-224ENST00000582275 COL23A1Q86Y22 540 aaPredicted RBP12.59□□□□□ -0.39
CDK5RAP3-224ENST00000582275 TUBGCP6Q96RT7 1819 aa12.59□□□□□ -0.39
CDK5RAP3-224ENST00000582275 GOLGB1Q14789 3259 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-224ENST00000582275 KIF3CO14782 793 aa12.58□□□□□ -0.4
CDK5RAP3-224ENST00000582275 PRIM1P49642 420 aaKnown RBP12.58□□□□□ -0.4
CDK5RAP3-224ENST00000582275 USP47Q96K76 1375 aa12.57□□□□□ -0.4
CDK5RAP3-224ENST00000582275 TOMM70O94826 608 aa12.57□□□□□ -0.4
CDK5RAP3-224ENST00000582275 LY75O60449 1722 aa12.57□□□□□ -0.4
CDK5RAP3-224ENST00000582275 KCNQ4P56696 695 aa12.56□□□□□ -0.4
CDK5RAP3-224ENST00000582275 MSL1Q68DK7 614 aa12.56□□□□□ -0.4
CDK5RAP3-224ENST00000582275 DNAJC5GQ8N7S2 189 aa12.56□□□□□ -0.4
CDK5RAP3-224ENST00000582275 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDK5RAP3-224ENST00000582275 IGSF1Q8N6C5 1336 aa12.54□□□□□ -0.4
CDK5RAP3-224ENST00000582275 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
CDK5RAP3-224ENST00000582275 FAM208AQ9UK61 1670 aaKnown RBP12.54□□□□□ -0.4
CDK5RAP3-224ENST00000582275 ZCRB1Q8TBF4 217 aaKnown RBP12.53□□□□□ -0.4
CDK5RAP3-224ENST00000582275 NSD2O96028 1365 aa12.53□□□□□ -0.4
CDK5RAP3-224ENST00000582275 LTN1O94822 1766 aa12.53□□□□□ -0.4
CDK5RAP3-224ENST00000582275 NSD3Q9BZ95 1437 aa12.53□□□□□ -0.4
CDK5RAP3-224ENST00000582275 IP6K1Q92551 441 aa12.52□□□□□ -0.41
CDK5RAP3-224ENST00000582275 MON2Q7Z3U7 1717 aa12.51□□□□□ -0.41
CDK5RAP3-224ENST00000582275 DOT1LQ8TEK3 1739 aa12.51□□□□□ -0.41
CDK5RAP3-224ENST00000582275 PRELPP51888 382 aa12.51□□□□□ -0.41
CDK5RAP3-224ENST00000582275 HDGFL2Q7Z4V5 671 aaPredicted RBP12.51□□□□□ -0.41
CDK5RAP3-224ENST00000582275 NME9Q86XW9 330 aa12.51□□□□□ -0.41
CDK5RAP3-224ENST00000582275 CGNL1Q0VF96 1302 aa12.51□□□□□ -0.41
CDK5RAP3-224ENST00000582275 C16orf71Q8IYS4 520 aaPredicted RBP12.5□□□□□ -0.41
CDK5RAP3-224ENST00000582275 TNS4Q8IZW8 715 aa12.5□□□□□ -0.41
CDK5RAP3-224ENST00000582275 JMYQ8N9B5 988 aa12.5□□□□□ -0.41
CDK5RAP3-224ENST00000582275 RBM46Q8TBY0 533 aaKnown RBP12.5□□□□□ -0.41
CDK5RAP3-224ENST00000582275 KLRG1Q96E93 195 aa12.5□□□□□ -0.41
CDK5RAP3-224ENST00000582275 AK7Q96M32 723 aa12.5□□□□□ -0.41
CDK5RAP3-224ENST00000582275 COL13A1Q5TAT6 717 aaPredicted RBP12.49□□□□□ -0.41
CDK5RAP3-224ENST00000582275 CICQ96RK0 1608 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-224ENST00000582275 EDC4Q6P2E9 1401 aaKnown RBP12.48□□□□□ -0.41
CDK5RAP3-224ENST00000582275 SBNO2Q9Y2G9 1366 aa12.48□□□□□ -0.41
CDK5RAP3-224ENST00000582275 FSTL1Q12841 308 aa12.48□□□□□ -0.41
CDK5RAP3-224ENST00000582275 SMARCC1Q92922 1105 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-224ENST00000582275 LTV1Q96GA3 475 aaPredicted RBP12.48□□□□□ -0.41
CDK5RAP3-224ENST00000582275 C5P01031 1676 aa12.48□□□□□ -0.41
CDK5RAP3-224ENST00000582275 TERF2IPQ9NYB0 399 aa12.47□□□□□ -0.41
CDK5RAP3-224ENST00000582275 PALLDQ8WX93 1383 aa12.46□□□□□ -0.41
CDK5RAP3-224ENST00000582275 WDR90Q96KV7 1748 aa12.46□□□□□ -0.41
CDK5RAP3-224ENST00000582275 SSFA2P28290 1259 aa12.46□□□□□ -0.41
CDK5RAP3-224ENST00000582275 RAPGEF4Q8WZA2 1011 aa12.46□□□□□ -0.41
CDK5RAP3-224ENST00000582275 ROCK2O75116 1388 aaKnown RBP12.45□□□□□ -0.42
CDK5RAP3-224ENST00000582275 AMPHP49418 695 aa12.45□□□□□ -0.42
CDK5RAP3-224ENST00000582275 TGFB2P61812 414 aa12.45□□□□□ -0.42
CDK5RAP3-224ENST00000582275 TMC1Q8TDI8 760 aa12.45□□□□□ -0.42
CDK5RAP3-224ENST00000582275 WWC3Q9ULE0 1092 aa12.45□□□□□ -0.42
CDK5RAP3-224ENST00000582275 ZBTB12Q9Y330 459 aaPredicted RBP12.45□□□□□ -0.42
CDK5RAP3-224ENST00000582275 PLEKHG2Q9H7P9 1386 aa12.44□□□□□ -0.42
CDK5RAP3-224ENST00000582275 PCDH11XQ9BZA7 1347 aa12.44□□□□□ -0.42
CDK5RAP3-224ENST00000582275 PCDH11YQ9BZA8 1340 aa12.44□□□□□ -0.42
CDK5RAP3-224ENST00000582275 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.44□□□□□ -0.42
CDK5RAP3-224ENST00000582275 HOXC9P31274 260 aa12.44□□□□□ -0.42
CDK5RAP3-224ENST00000582275 TAF1LQ8IZX4 1826 aa12.44□□□□□ -0.42
CDK5RAP3-224ENST00000582275 KDM2BQ8NHM5 1336 aa12.43□□□□□ -0.42
CDK5RAP3-224ENST00000582275 MEGF6O75095 1541 aa12.43□□□□□ -0.42
CDK5RAP3-224ENST00000582275 C4BP0C0L5 1744 aa12.43□□□□□ -0.42
CDK5RAP3-224ENST00000582275 PHF14O94880 888 aa12.43□□□□□ -0.42
CDK5RAP3-224ENST00000582275 TATP17735 454 aaPredicted RBP12.43□□□□□ -0.42
CDK5RAP3-224ENST00000582275 COG3Q96JB2 828 aa12.43□□□□□ -0.42
CDK5RAP3-224ENST00000582275 NMRK2Q9NPI5 230 aa12.43□□□□□ -0.42
CDK5RAP3-224ENST00000582275 CD163L1Q9NR16 1453 aa12.42□□□□□ -0.42
CDK5RAP3-224ENST00000582275 MPRIPQ6WCQ1 1025 aa12.42□□□□□ -0.42
CDK5RAP3-224ENST00000582275 ARHGAP27Q6ZUM4 889 aa12.42□□□□□ -0.42
CDK5RAP3-224ENST00000582275 BCS1LQ9Y276 419 aa12.42□□□□□ -0.42
CDK5RAP3-224ENST00000582275 SMG6Q86US8 1419 aaKnown RBP12.42□□□□□ -0.42
CDK5RAP3-224ENST00000582275 RTL1A6NKG5 1358 aa12.42□□□□□ -0.42
CDK5RAP3-224ENST00000582275 MAP3K19Q56UN5 1328 aa12.41□□□□□ -0.42
CDK5RAP3-224ENST00000582275 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
CDK5RAP3-224ENST00000582275 PXDNLA1KZ92 1463 aa12.4□□□□□ -0.42
CDK5RAP3-224ENST00000582275 UBR3Q6ZT12 1888 aa12.4□□□□□ -0.42
CDK5RAP3-224ENST00000582275 C10orf71Q711Q0 1435 aa12.4□□□□□ -0.42
CDK5RAP3-224ENST00000582275 SMC1BQ8NDV3 1235 aa12.4□□□□□ -0.42
CDK5RAP3-224ENST00000582275 L3MBTL2Q969R5 705 aa12.4□□□□□ -0.42
CDK5RAP3-224ENST00000582275 SLC12A5Q9H2X9 1139 aa12.4□□□□□ -0.42
CDK5RAP3-224ENST00000582275 MMP10P09238 476 aa12.39□□□□□ -0.43
CDK5RAP3-224ENST00000582275 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms