RNA–Protein interactions for RNA: ENST00000581625.2

CCDC57-213, Transcript of coiled-coil domain containing 57, humanhuman

TSL 5

Gene CCDC57, Length 491 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-213ENST00000581625 PDE3BQ13370 1112 aa21.32■■□□□ 1
CCDC57-213ENST00000581625 AEBP1Q8IUX7 1158 aa21.32■■□□□ 1
CCDC57-213ENST00000581625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.32■■□□□ 14e-7■□□□□ 8.8
CCDC57-213ENST00000581625 U2AF1L5P0DN76 240 aaPredicted RBP21.31■■□□□ 1
CCDC57-213ENST00000581625 U2AF1Q01081 240 aaKnown RBP eCLIP21.31■■□□□ 1
CCDC57-213ENST00000581625 PCDH11XQ9BZA7 1347 aa21.3■■□□□ 1
CCDC57-213ENST00000581625 PCDH11YQ9BZA8 1340 aa21.3■■□□□ 1
CCDC57-213ENST00000581625 SHANK3Q9BYB0 1731 aa21.3■■□□□ 1
CCDC57-213ENST00000581625 HMOX1P09601 288 aa21.3■■□□□ 1
CCDC57-213ENST00000581625 ZCRB1Q8TBF4 217 aaKnown RBP21.29■■□□□ 1
CCDC57-213ENST00000581625 SPG7Q9UQ90 795 aa21.29■■□□□ 1
CCDC57-213ENST00000581625 FCHSD2O94868 740 aa21.28■■□□□ 1
CCDC57-213ENST00000581625 WDR43Q15061 677 aaKnown RBP eCLIP21.28■■□□□ 1
CCDC57-213ENST00000581625 AMOTQ4VCS5 1084 aa21.28■■□□□ 1
CCDC57-213ENST00000581625 BCL9O00512 1426 aa21.28■■□□□ 1
CCDC57-213ENST00000581625 ILDR2Q71H61 639 aa21.27■■□□□ 1
CCDC57-213ENST00000581625 RSPH6AQ9H0K4 717 aa21.27■■□□□ 1
CCDC57-213ENST00000581625 MRS2Q9HD23 443 aa21.27■■□□□ 1
CCDC57-213ENST00000581625 PNNQ9H307 717 aaKnown RBP21.26■□□□□ 0.99
CCDC57-213ENST00000581625 PLEKHO1Q53GL0 409 aaPredicted RBP21.25■□□□□ 0.99
CCDC57-213ENST00000581625 PRKAR2BP31323 418 aa21.24■□□□□ 0.99
CCDC57-213ENST00000581625 MARCH10Q8NA82 808 aaPredicted RBP21.23■□□□□ 0.99
CCDC57-213ENST00000581625 NEFMP07197 916 aa21.22■□□□□ 0.99
CCDC57-213ENST00000581625 FAM196AQ6ZSG2 479 aa21.22■□□□□ 0.99
CCDC57-213ENST00000581625 DDX54Q8TDD1 881 aaKnown RBP21.22■□□□□ 0.99
CCDC57-213ENST00000581625 CCER2I3L3R5 266 aa21.21■□□□□ 0.99
CCDC57-213ENST00000581625 CCDC184Q52MB2 194 aa21.21■□□□□ 0.99
CCDC57-213ENST00000581625 EP400Q96L91 3159 aa21.21■□□□□ 0.99
CCDC57-213ENST00000581625 ZNF530Q6P9A1 599 aaPredicted RBP21.2■□□□□ 0.98
CCDC57-213ENST00000581625 IFNL2Q8IZJ0 200 aa21.2■□□□□ 0.98
CCDC57-213ENST00000581625 GAS2L2Q8NHY3 880 aa21.2■□□□□ 0.98
CCDC57-213ENST00000581625 CYP27B1O15528 508 aa21.19■□□□□ 0.98
CCDC57-213ENST00000581625 PHKG2P15735 406 aa21.19■□□□□ 0.98
CCDC57-213ENST00000581625 C1orf141Q5JVX7 400 aa21.19■□□□□ 0.98
CCDC57-213ENST00000581625 MAPK8IP3Q9UPT6 1336 aa21.19■□□□□ 0.98
CCDC57-213ENST00000581625 HSP90AB1P08238 724 aaKnown RBP21.18■□□□□ 0.98
CCDC57-213ENST00000581625 FAM182BQ5T319 152 aa21.18■□□□□ 0.98
CCDC57-213ENST00000581625 PNISRQ8TF01 805 aaKnown RBP21.17■□□□□ 0.98
CCDC57-213ENST00000581625 PLEKHF1Q96S99 279 aa21.17■□□□□ 0.98
CCDC57-213ENST00000581625 ADAMTS8Q9UP79 889 aa21.17■□□□□ 0.98
CCDC57-213ENST00000581625 NHSQ6T4R5 1651 aa21.17■□□□□ 0.98
CCDC57-213ENST00000581625 DOT1LQ8TEK3 1739 aa21.17■□□□□ 0.98
CCDC57-213ENST00000581625 NKX1-1Q15270 411 aaPredicted RBP21.16■□□□□ 0.98
CCDC57-213ENST00000581625 MTHFSDQ2M296 383 aaKnown RBP21.16■□□□□ 0.98
CCDC57-213ENST00000581625 AKAP4Q5JQC9 854 aa21.16■□□□□ 0.98
CCDC57-213ENST00000581625 MAP3K5Q99683 1374 aa21.14■□□□□ 0.98
CCDC57-213ENST00000581625 SBF2Q86WG5 1849 aa21.14■□□□□ 0.97
CCDC57-213ENST00000581625 DCAF5Q96JK2 942 aa21.14■□□□□ 0.97
CCDC57-213ENST00000581625 PHACTR3Q96KR7 559 aa21.14■□□□□ 0.97
CCDC57-213ENST00000581625 TOGARAM1Q9Y4F4 1720 aa21.13■□□□□ 0.97
CCDC57-213ENST00000581625 MIER1Q8N108 512 aa21.13■□□□□ 0.97
CCDC57-213ENST00000581625 RUNDC1Q96C34 613 aa21.13■□□□□ 0.97
CCDC57-213ENST00000581625 KDM6AO15550 1401 aaPredicted RBP21.12■□□□□ 0.97
CCDC57-213ENST00000581625 ADAMTS7Q9UKP4 1686 aa21.12■□□□□ 0.97
CCDC57-213ENST00000581625 CCDC125Q86Z20 511 aa21.12■□□□□ 0.97
CCDC57-213ENST00000581625 TNS1Q9HBL0 1735 aaKnown RBP21.12■□□□□ 0.97
CCDC57-213ENST00000581625 MRC1P22897 1456 aa21.1■□□□□ 0.97
CCDC57-213ENST00000581625 GNAT3A8MTJ3 354 aa21.1■□□□□ 0.97
CCDC57-213ENST00000581625 NFE2L2Q16236 605 aa21.09■□□□□ 0.97
CCDC57-213ENST00000581625 CCDC146Q8IYE0 955 aa21.09■□□□□ 0.97
CCDC57-213ENST00000581625 BCL11BQ9C0K0 894 aaPredicted RBP21.09■□□□□ 0.97
CCDC57-213ENST00000581625 SCN11AQ9UI33 1791 aa21.09■□□□□ 0.97
CCDC57-213ENST00000581625 HTATSF1O43719 755 aaKnown RBP21.08■□□□□ 0.97
CCDC57-213ENST00000581625 TRIM37O94972 964 aa21.08■□□□□ 0.97
CCDC57-213ENST00000581625 SF3B2Q13435 895 aaKnown RBP21.08■□□□□ 0.97
CCDC57-213ENST00000581625 ERVV-2B6SEH9 535 aa21.07■□□□□ 0.96
CCDC57-213ENST00000581625 RTF1Q92541 710 aaKnown RBP21.07■□□□□ 0.96
CCDC57-213ENST00000581625 UPF1Q92900 1129 aaKnown RBP eCLIP21.07■□□□□ 0.96
CCDC57-213ENST00000581625 ACSBG1Q96GR2 724 aa21.07■□□□□ 0.96
CCDC57-213ENST00000581625 RGPD3A6NKT7 1758 aaPredicted RBP21.06■□□□□ 0.96
CCDC57-213ENST00000581625 RGPD4Q7Z3J3 1758 aa21.06■□□□□ 0.96
CCDC57-213ENST00000581625 LMOD3Q0VAK6 560 aa21.06■□□□□ 0.96
CCDC57-213ENST00000581625 MPRIPQ6WCQ1 1025 aa21.06■□□□□ 0.96
CCDC57-213ENST00000581625 FAM9BQ8IZU0 186 aa21.06■□□□□ 0.96
CCDC57-213ENST00000581625 SYTL4Q96C24 671 aaPredicted RBP21.06■□□□□ 0.96
CCDC57-213ENST00000581625 PRIM1P49642 420 aaKnown RBP21.05■□□□□ 0.96
CCDC57-213ENST00000581625 BTAF1O14981 1849 aa21.05■□□□□ 0.96
CCDC57-213ENST00000581625 ITGB4P16144 1822 aa21.05■□□□□ 0.96
CCDC57-213ENST00000581625 CEMIPQ8WUJ3 1361 aa21.05■□□□□ 0.96
CCDC57-213ENST00000581625 RNMTO43148 476 aaKnown RBP21.04■□□□□ 0.96
CCDC57-213ENST00000581625 KCNQ2O43526 872 aa21.04■□□□□ 0.96
CCDC57-213ENST00000581625 TMPOP42166 694 aaKnown RBP21.04■□□□□ 0.96
CCDC57-213ENST00000581625 TMOD3Q9NYL9 352 aa21.04■□□□□ 0.96
CCDC57-213ENST00000581625 DLG5Q8TDM6 1919 aa21.04■□□□□ 0.96
CCDC57-213ENST00000581625 VIRMAQ69YN4 1812 aaKnown RBP21.04■□□□□ 0.96
CCDC57-213ENST00000581625 SOCS7O14512 581 aa21.03■□□□□ 0.96
CCDC57-213ENST00000581625 BAG6P46379 1132 aa21.02■□□□□ 0.96
CCDC57-213ENST00000581625 CABP4P57796 275 aa21.02■□□□□ 0.96
CCDC57-213ENST00000581625 RIPK4P57078 832 aa21.01■□□□□ 0.95
CCDC57-213ENST00000581625 SLC52A2Q9HAB3 445 aa21.01■□□□□ 0.95
CCDC57-213ENST00000581625 APAF1O14727 1248 aa21■□□□□ 0.95
CCDC57-213ENST00000581625 APBA3O96018 575 aa21■□□□□ 0.95
CCDC57-213ENST00000581625 TEFQ10587 303 aa21■□□□□ 0.95
CCDC57-213ENST00000581625 IL17REQ8NFR9 667 aa21■□□□□ 0.95
CCDC57-213ENST00000581625 LGR6Q9HBX8 967 aa21■□□□□ 0.95
CCDC57-213ENST00000581625 NCBP3Q53F19 620 aaKnown RBP20.99■□□□□ 0.95
CCDC57-213ENST00000581625 PTF1AQ7RTS3 328 aa20.99■□□□□ 0.95
CCDC57-213ENST00000581625 PIGBQ92521 554 aa20.99■□□□□ 0.95
CCDC57-213ENST00000581625 SIPA1L3O60292 1781 aaPredicted RBP20.99■□□□□ 0.95
CCDC57-213ENST00000581625 PAPPAQ13219 1627 aa20.98■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms