RNA–Protein interactions for RNA: ENST00000580888.5

EIF4A1-216, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-216ENST00000580888 COG3Q96JB2 828 aa23.71■■□□□ 1.39
EIF4A1-216ENST00000580888 NBPF14Q5TI25 921 aa23.7■■□□□ 1.38
EIF4A1-216ENST00000580888 NLRP2Q9NX02 1062 aa23.7■■□□□ 1.38
EIF4A1-216ENST00000580888 FYB1O15117 783 aa23.69■■□□□ 1.38
EIF4A1-216ENST00000580888 ADAMTS8Q9UP79 889 aa23.69■■□□□ 1.38
EIF4A1-216ENST00000580888 RGPD2P0DJD1 1756 aa23.68■■□□□ 1.38
EIF4A1-216ENST00000580888 IL2RBP14784 551 aa23.67■■□□□ 1.38
EIF4A1-216ENST00000580888 PTF1AQ7RTS3 328 aa23.67■■□□□ 1.38
EIF4A1-216ENST00000580888 MAP3K19Q56UN5 1328 aa23.66■■□□□ 1.38
EIF4A1-216ENST00000580888 RTL1A6NKG5 1358 aa23.65■■□□□ 1.38
EIF4A1-216ENST00000580888 KAT6BQ8WYB5 2073 aa23.65■■□□□ 1.38
EIF4A1-216ENST00000580888 WDR43Q15061 677 aaKnown RBP eCLIP23.64■■□□□ 1.37
EIF4A1-216ENST00000580888 BTAF1O14981 1849 aa23.63■■□□□ 1.37
EIF4A1-216ENST00000580888 CASZ1Q86V15 1759 aa23.63■■□□□ 1.37
EIF4A1-216ENST00000580888 HOXC9P31274 260 aa23.63■■□□□ 1.37
EIF4A1-216ENST00000580888 NUDCQ9Y266 331 aa23.63■■□□□ 1.37
EIF4A1-216ENST00000580888 SHANK3Q9BYB0 1731 aa23.62■■□□□ 1.37
EIF4A1-216ENST00000580888 PROM2Q8N271 834 aa23.61■■□□□ 1.37
EIF4A1-216ENST00000580888 MTHFSP49914 203 aa23.6■■□□□ 1.37
EIF4A1-216ENST00000580888 SUPT16HQ9Y5B9 1047 aaKnown RBP23.6■■□□□ 1.37
EIF4A1-216ENST00000580888 GGNBP2Q9H3C7 697 aa23.59■■□□□ 1.37
EIF4A1-216ENST00000580888 KIF24Q5T7B8 1368 aa23.58■■□□□ 1.37
EIF4A1-216ENST00000580888 FBLN1P23142 703 aa23.58■■□□□ 1.37
EIF4A1-216ENST00000580888 AMPHP49418 695 aa23.58■■□□□ 1.37
EIF4A1-216ENST00000580888 COL3A1P02461 1466 aaPredicted RBP23.57■■□□□ 1.36
EIF4A1-216ENST00000580888 KCNQ2O43526 872 aa23.57■■□□□ 1.36
EIF4A1-216ENST00000580888 NGEFQ8N5V2 710 aa23.57■■□□□ 1.36
EIF4A1-216ENST00000580888 ANO8Q9HCE9 1232 aaPredicted RBP23.57■■□□□ 1.36
EIF4A1-216ENST00000580888 TXNRD1Q16881 649 aa23.56■■□□□ 1.36
EIF4A1-216ENST00000580888 LTV1Q96GA3 475 aaPredicted RBP23.56■■□□□ 1.36
EIF4A1-216ENST00000580888 ZNF521Q96K83 1311 aa23.56■■□□□ 1.36
EIF4A1-216ENST00000580888 PAPPAQ13219 1627 aa23.55■■□□□ 1.36
EIF4A1-216ENST00000580888 CFAP53Q96M91 514 aa23.55■■□□□ 1.36
EIF4A1-216ENST00000580888 RNF123Q5XPI4 1314 aa23.55■■□□□ 1.36
EIF4A1-216ENST00000580888 RRS1Q15050 365 aaKnown RBP23.54■■□□□ 1.36
EIF4A1-216ENST00000580888 TNNT2P45379 298 aaPredicted RBP23.53■■□□□ 1.36
EIF4A1-216ENST00000580888 MEGF6O75095 1541 aa23.53■■□□□ 1.36
EIF4A1-216ENST00000580888 DOT1LQ8TEK3 1739 aa23.53■■□□□ 1.36
EIF4A1-216ENST00000580888 MAP2P11137 1827 aaKnown RBP23.52■■□□□ 1.36
EIF4A1-216ENST00000580888 NCBP3Q53F19 620 aaKnown RBP23.52■■□□□ 1.36
EIF4A1-216ENST00000580888 ACSBG1Q96GR2 724 aa23.52■■□□□ 1.36
EIF4A1-216ENST00000580888 FLT4P35916 1363 aa23.52■■□□□ 1.36
EIF4A1-216ENST00000580888 SPON1Q9HCB6 807 aa23.51■■□□□ 1.35
EIF4A1-216ENST00000580888 NEFLP07196 543 aa23.49■■□□□ 1.35
EIF4A1-216ENST00000580888 NBPF6Q5VWK0 638 aa23.49■■□□□ 1.35
EIF4A1-216ENST00000580888 NBPF4Q96M43 638 aa23.49■■□□□ 1.35
EIF4A1-216ENST00000580888 LY75O60449 1722 aa23.48■■□□□ 1.35
EIF4A1-216ENST00000580888 QSER1Q2KHR3 1735 aa23.48■■□□□ 1.35
EIF4A1-216ENST00000580888 FKBP8Q14318 412 aa23.48■■□□□ 1.35
EIF4A1-216ENST00000580888 SLC15A2Q16348 729 aa23.48■■□□□ 1.35
EIF4A1-216ENST00000580888 ERICH6BQ5W0A0 696 aa23.48■■□□□ 1.35
EIF4A1-216ENST00000580888 STK32BQ9NY57 414 aa23.48■■□□□ 1.35
EIF4A1-216ENST00000580888 ZCRB1Q8TBF4 217 aaKnown RBP23.47■■□□□ 1.35
EIF4A1-216ENST00000580888 DDX54Q8TDD1 881 aaKnown RBP23.47■■□□□ 1.35
EIF4A1-216ENST00000580888 HSP90AB2PQ58FF8 381 aa23.46■■□□□ 1.35
EIF4A1-216ENST00000580888 NCAPD2Q15021 1401 aa23.45■■□□□ 1.34
EIF4A1-216ENST00000580888 RUNDC1Q96C34 613 aa23.45■■□□□ 1.34
EIF4A1-216ENST00000580888 POLKQ9UBT6 870 aa23.45■■□□□ 1.34
EIF4A1-216ENST00000580888 PKD1L3Q7Z443 1732 aa23.45■■□□□ 1.34
EIF4A1-216ENST00000580888 SENP3-EIF4A1A0A087X0R7 540 aa23.44■■□□□ 1.34
EIF4A1-216ENST00000580888 APAF1O14727 1248 aa23.43■■□□□ 1.34
EIF4A1-216ENST00000580888 TRMT2AQ8IZ69 625 aaKnown RBP23.43■■□□□ 1.34
EIF4A1-216ENST00000580888 PDGFDQ9GZP0 370 aaPredicted RBP23.43■■□□□ 1.34
EIF4A1-216ENST00000580888 CCDC146Q8IYE0 955 aa23.42■■□□□ 1.34
EIF4A1-216ENST00000580888 SLC27A3Q5K4L6 730 aa23.41■■□□□ 1.34
EIF4A1-216ENST00000580888 USHBP1Q8N6Y0 703 aa23.41■■□□□ 1.34
EIF4A1-216ENST00000580888 RAPGEF4Q8WZA2 1011 aa23.41■■□□□ 1.34
EIF4A1-216ENST00000580888 CDCA7LQ96GN5 454 aa23.41■■□□□ 1.34
EIF4A1-216ENST00000580888 SALL2Q9Y467 1007 aaPredicted RBP23.41■■□□□ 1.34
EIF4A1-216ENST00000580888 EMILIN1Q9Y6C2 1016 aa23.41■■□□□ 1.34
EIF4A1-216ENST00000580888 LRRC4BQ9NT99 713 aa23.4■■□□□ 1.34
EIF4A1-216ENST00000580888 TUBGCP6Q96RT7 1819 aa23.4■■□□□ 1.34
EIF4A1-216ENST00000580888 COL24A1Q17RW2 1714 aa23.39■■□□□ 1.34
EIF4A1-216ENST00000580888 TATP17735 454 aaPredicted RBP23.39■■□□□ 1.33
EIF4A1-216ENST00000580888 PRIM1P49642 420 aaKnown RBP23.39■■□□□ 1.33
EIF4A1-216ENST00000580888 PPP1R1BQ9UD71 204 aaPredicted RBP23.39■■□□□ 1.33
EIF4A1-216ENST00000580888 DIAPH1O60610 1272 aaKnown RBP23.38■■□□□ 1.33
EIF4A1-216ENST00000580888 CCDC27Q2M243 656 aa23.38■■□□□ 1.33
EIF4A1-216ENST00000580888 ITGB4P16144 1822 aa23.38■■□□□ 1.33
EIF4A1-216ENST00000580888 PTGER2P43116 358 aa23.37■■□□□ 1.33
EIF4A1-216ENST00000580888 GOLGA2Q08379 1002 aa23.37■■□□□ 1.33
EIF4A1-216ENST00000580888 SLFN5Q08AF3 891 aa23.37■■□□□ 1.33
EIF4A1-216ENST00000580888 PLEKHF1Q96S99 279 aa23.37■■□□□ 1.33
EIF4A1-216ENST00000580888 PCDH11XQ9BZA7 1347 aa23.36■■□□□ 1.33
EIF4A1-216ENST00000580888 PCDH11YQ9BZA8 1340 aa23.36■■□□□ 1.33
EIF4A1-216ENST00000580888 ZBTB7AO95365 584 aa23.36■■□□□ 1.33
EIF4A1-216ENST00000580888 DUSP27Q5VZP5 1158 aa23.36■■□□□ 1.33
EIF4A1-216ENST00000580888 AKT1S1Q96B36 256 aa23.36■■□□□ 1.33
EIF4A1-216ENST00000580888 TOGARAM1Q9Y4F4 1720 aa23.36■■□□□ 1.33
EIF4A1-216ENST00000580888 ZNF827Q17R98 1081 aa23.35■■□□□ 1.33
EIF4A1-216ENST00000580888 MTFR1LQ9H019 292 aa23.35■■□□□ 1.33
EIF4A1-216ENST00000580888 U2AF1L5P0DN76 240 aaPredicted RBP23.34■■□□□ 1.33
EIF4A1-216ENST00000580888 U2AF1Q01081 240 aaKnown RBP eCLIP23.34■■□□□ 1.331e-10■■■■□ 21.4
EIF4A1-216ENST00000580888 SYTL4Q96C24 671 aaPredicted RBP23.34■■□□□ 1.33
EIF4A1-216ENST00000580888 SGIP1Q9BQI5 828 aa23.34■■□□□ 1.33
EIF4A1-216ENST00000580888 TAF1LQ8IZX4 1826 aa23.32■■□□□ 1.32
EIF4A1-216ENST00000580888 WWC1Q8IX03 1113 aa23.32■■□□□ 1.32
EIF4A1-216ENST00000580888 RCAN3Q9UKA8 241 aa23.32■■□□□ 1.32
EIF4A1-216ENST00000580888 PLEKHG2Q9H7P9 1386 aa23.31■■□□□ 1.32
EIF4A1-216ENST00000580888 IL13P35225 146 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms