RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 A0A0G2JS52 829 aa15.53■□□□□ 0.08
SNORD3C-201ENST00000580533 MYT1Q01538 1121 aa15.53■□□□□ 0.08
SNORD3C-201ENST00000580533 GAS2L2Q8NHY3 880 aa15.53■□□□□ 0.08
SNORD3C-201ENST00000580533 RXRBP28702 533 aa15.52■□□□□ 0.08
SNORD3C-201ENST00000580533 AEBP1Q8IUX7 1158 aa15.52■□□□□ 0.08
SNORD3C-201ENST00000580533 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
SNORD3C-201ENST00000580533 OVOS2A0A0G2JMS6 1433 aa15.51■□□□□ 0.07
SNORD3C-201ENST00000580533 EXOC5O00471 708 aa15.51■□□□□ 0.07
SNORD3C-201ENST00000580533 RGPD2P0DJD1 1756 aa15.51■□□□□ 0.07
SNORD3C-201ENST00000580533 PCDH11XQ9BZA7 1347 aa15.5■□□□□ 0.07
SNORD3C-201ENST00000580533 PCDH11YQ9BZA8 1340 aa15.5■□□□□ 0.07
SNORD3C-201ENST00000580533 LMOD3Q0VAK6 560 aa15.5■□□□□ 0.07
SNORD3C-201ENST00000580533 DDB1Q16531 1140 aa15.5■□□□□ 0.07
SNORD3C-201ENST00000580533 FAM98CQ17RN3 349 aaKnown RBP15.5■□□□□ 0.07
SNORD3C-201ENST00000580533 C1orf141Q5JVX7 400 aa15.5■□□□□ 0.07
SNORD3C-201ENST00000580533 DISP2A7MBM2 1401 aa15.5■□□□□ 0.07
SNORD3C-201ENST00000580533 WNK3Q9BYP7 1800 aa15.5■□□□□ 0.07
SNORD3C-201ENST00000580533 HSP90AB1P08238 724 aaKnown RBP15.49■□□□□ 0.07
SNORD3C-201ENST00000580533 ZCRB1Q8TBF4 217 aaKnown RBP15.49■□□□□ 0.07
SNORD3C-201ENST00000580533 MEGF6O75095 1541 aa15.48■□□□□ 0.07
SNORD3C-201ENST00000580533 ONECUT3O60422 494 aaPredicted RBP15.48■□□□□ 0.07
SNORD3C-201ENST00000580533 PLEKHF1Q96S99 279 aa15.48■□□□□ 0.07
SNORD3C-201ENST00000580533 TNS2Q63HR2 1409 aa15.48■□□□□ 0.07
SNORD3C-201ENST00000580533 GLI3P10071 1580 aa15.48■□□□□ 0.07
SNORD3C-201ENST00000580533 PDE3BQ13370 1112 aa15.47■□□□□ 0.07
SNORD3C-201ENST00000580533 NCBP3Q53F19 620 aaKnown RBP15.47■□□□□ 0.07
SNORD3C-201ENST00000580533 RTF1Q92541 710 aaKnown RBP15.47■□□□□ 0.07
SNORD3C-201ENST00000580533 NFE2L2Q16236 605 aa15.46■□□□□ 0.07
SNORD3C-201ENST00000580533 AKAP4Q5JQC9 854 aa15.46■□□□□ 0.07
SNORD3C-201ENST00000580533 ZNF530Q6P9A1 599 aaPredicted RBP15.46■□□□□ 0.07
SNORD3C-201ENST00000580533 CCDC146Q8IYE0 955 aa15.46■□□□□ 0.07
SNORD3C-201ENST00000580533 IFNL2Q8IZJ0 200 aa15.46■□□□□ 0.07
SNORD3C-201ENST00000580533 PKD1L3Q7Z443 1732 aa15.46■□□□□ 0.06
SNORD3C-201ENST00000580533 THSD7AQ9UPZ6 1657 aa15.45■□□□□ 0.06
SNORD3C-201ENST00000580533 HTATSF1O43719 755 aaKnown RBP15.45■□□□□ 0.06
SNORD3C-201ENST00000580533 SEPT12Q8IYM1 358 aa15.45■□□□□ 0.06
SNORD3C-201ENST00000580533 GNAT3A8MTJ3 354 aa15.44■□□□□ 0.06
SNORD3C-201ENST00000580533 CALD1Q05682 793 aaKnown RBP15.44■□□□□ 0.06
SNORD3C-201ENST00000580533 MTHFSDQ2M296 383 aaKnown RBP15.44■□□□□ 0.06
SNORD3C-201ENST00000580533 MAP3K5Q99683 1374 aa15.44■□□□□ 0.06
SNORD3C-201ENST00000580533 LRRC37A3O60309 1634 aa15.43■□□□□ 0.06
SNORD3C-201ENST00000580533 PHACTR3Q96KR7 559 aa15.43■□□□□ 0.06
SNORD3C-201ENST00000580533 RGS17Q9UGC6 210 aaPredicted RBP15.43■□□□□ 0.06
SNORD3C-201ENST00000580533 APAF1O14727 1248 aa15.42■□□□□ 0.06
SNORD3C-201ENST00000580533 TMPOP42166 694 aaKnown RBP15.42■□□□□ 0.06
SNORD3C-201ENST00000580533 RIPK4P57078 832 aa15.42■□□□□ 0.06
SNORD3C-201ENST00000580533 DDX54Q8TDD1 881 aaKnown RBP15.42■□□□□ 0.06
SNORD3C-201ENST00000580533 PHKG2P15735 406 aa15.41■□□□□ 0.06
SNORD3C-201ENST00000580533 CCDC27Q2M243 656 aa15.41■□□□□ 0.06
SNORD3C-201ENST00000580533 POTEAQ6S8J7 498 aa15.41■□□□□ 0.06
SNORD3C-201ENST00000580533 DCAF5Q96JK2 942 aa15.41■□□□□ 0.06
SNORD3C-201ENST00000580533 KRT27Q7Z3Y8 459 aa15.4■□□□□ 0.06
SNORD3C-201ENST00000580533 HNRNPUQ00839 825 aaKnown RBP eCLIP15.39■□□□□ 0.05
SNORD3C-201ENST00000580533 NKX1-1Q15270 411 aaPredicted RBP15.39■□□□□ 0.05
SNORD3C-201ENST00000580533 NEUROD2Q15784 382 aa15.39■□□□□ 0.05
SNORD3C-201ENST00000580533 RGS12O14924 1447 aa15.38■□□□□ 0.05
SNORD3C-201ENST00000580533 CYP27B1O15528 508 aa15.38■□□□□ 0.05
SNORD3C-201ENST00000580533 BCL9O00512 1426 aa15.37■□□□□ 0.05
SNORD3C-201ENST00000580533 TEFQ10587 303 aa15.37■□□□□ 0.05
SNORD3C-201ENST00000580533 FAM196AQ6ZSG2 479 aa15.37■□□□□ 0.05
SNORD3C-201ENST00000580533 RRP7AQ9Y3A4 280 aaKnown RBP15.37■□□□□ 0.05
SNORD3C-201ENST00000580533 ERVV-2B6SEH9 535 aa15.36■□□□□ 0.05
SNORD3C-201ENST00000580533 SHANK3Q9BYB0 1731 aa15.35■□□□□ 0.05
SNORD3C-201ENST00000580533 MPRIPQ6WCQ1 1025 aa15.35■□□□□ 0.05
SNORD3C-201ENST00000580533 MARCH10Q8NA82 808 aaPredicted RBP15.35■□□□□ 0.05
SNORD3C-201ENST00000580533 RNMTO43148 476 aaKnown RBP15.34■□□□□ 0.05
SNORD3C-201ENST00000580533 CABP4P57796 275 aa15.34■□□□□ 0.05
SNORD3C-201ENST00000580533 WDR63Q8IWG1 891 aa15.34■□□□□ 0.05
SNORD3C-201ENST00000580533 ZBED9Q6R2W3 1325 aa15.34■□□□□ 0.05
SNORD3C-201ENST00000580533 CEMIPQ8WUJ3 1361 aa15.34■□□□□ 0.05
SNORD3C-201ENST00000580533 WWC1Q8IX03 1113 aa15.33■□□□□ 0.04
SNORD3C-201ENST00000580533 BABAM1Q9NWV8 329 aa15.33■□□□□ 0.04
SNORD3C-201ENST00000580533 TMOD3Q9NYL9 352 aa15.33■□□□□ 0.04
SNORD3C-201ENST00000580533 IL16Q14005 1332 aa15.33■□□□□ 0.04
SNORD3C-201ENST00000580533 GNAI1P63096 354 aa15.32■□□□□ 0.04
SNORD3C-201ENST00000580533 MCM10Q7L590 875 aa15.32■□□□□ 0.04
SNORD3C-201ENST00000580533 SLC52A2Q9HAB3 445 aa15.32■□□□□ 0.04
SNORD3C-201ENST00000580533 TRIM35Q9UPQ4 493 aa15.32■□□□□ 0.04
SNORD3C-201ENST00000580533 SALL2Q9Y467 1007 aaPredicted RBP15.32■□□□□ 0.04
SNORD3C-201ENST00000580533 DLG5Q8TDM6 1919 aa15.31■□□□□ 0.04
SNORD3C-201ENST00000580533 HMGB2P26583 209 aaKnown RBP15.31■□□□□ 0.04
SNORD3C-201ENST00000580533 MYH16Q9H6N6 1097 aa15.31■□□□□ 0.04
SNORD3C-201ENST00000580533 KDM6AO15550 1401 aaPredicted RBP15.31■□□□□ 0.04
SNORD3C-201ENST00000580533 MRC1P22897 1456 aa15.31■□□□□ 0.04
SNORD3C-201ENST00000580533 ADAMTS7Q9UKP4 1686 aa15.31■□□□□ 0.04
SNORD3C-201ENST00000580533 SCN11AQ9UI33 1791 aa15.31■□□□□ 0.04
SNORD3C-201ENST00000580533 GOLGA2Q08379 1002 aa15.3■□□□□ 0.04
SNORD3C-201ENST00000580533 TAF7Q15545 349 aaPredicted RBP15.3■□□□□ 0.04
SNORD3C-201ENST00000580533 IL17REQ8NFR9 667 aa15.3■□□□□ 0.04
SNORD3C-201ENST00000580533 SYTL4Q96C24 671 aaPredicted RBP15.3■□□□□ 0.04
SNORD3C-201ENST00000580533 IFT57Q9NWB7 429 aa15.3■□□□□ 0.04
SNORD3C-201ENST00000580533 BRWD3Q6RI45 1802 aa15.29■□□□□ 0.04
SNORD3C-201ENST00000580533 TTC5Q8N0Z6 440 aa15.29■□□□□ 0.04
SNORD3C-201ENST00000580533 YTHDC1Q96MU7 727 aaKnown RBP15.29■□□□□ 0.04
SNORD3C-201ENST00000580533 LGR6Q9HBX8 967 aa15.29■□□□□ 0.04
SNORD3C-201ENST00000580533 BTBD11A6QL63 1104 aa15.28■□□□□ 0.04
SNORD3C-201ENST00000580533 E9PSI1 815 aa15.28■□□□□ 0.04
SNORD3C-201ENST00000580533 DCTN1Q14203 1278 aa15.28■□□□□ 0.04
SNORD3C-201ENST00000580533 SMARCC1Q92922 1105 aaPredicted RBP15.28■□□□□ 0.04
SNORD3C-201ENST00000580533 CFAP44Q96MT7 982 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms