RNA–Protein interactions for RNA: ENST00000579419.5

IFT20-209, Transcript of intraflagellar transport 20, humanhuman

APPRIS ALT1 TSL 3 BASIC

Gene IFT20, Length 787 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-209ENST00000579419 ZNF526Q8TF50 670 aaPredicted RBP22.58■■□□□ 1.21
IFT20-209ENST00000579419 GPBP1L1Q9HC44 474 aaPredicted RBP22.58■■□□□ 1.21
IFT20-209ENST00000579419 CCNL1Q9UK58 526 aaPredicted RBP22.58■■□□□ 1.21
IFT20-209ENST00000579419 HSPA6P17066 643 aa22.57■■□□□ 1.2
IFT20-209ENST00000579419 ROCK2O75116 1388 aaKnown RBP22.57■■□□□ 1.2
IFT20-209ENST00000579419 ADCY9O60503 1353 aa22.55■■□□□ 1.2
IFT20-209ENST00000579419 IP6K1Q92551 441 aa22.55■■□□□ 1.2
IFT20-209ENST00000579419 DOT1LQ8TEK3 1739 aa22.54■■□□□ 1.2
IFT20-209ENST00000579419 LY75O60449 1722 aa22.54■■□□□ 1.2
IFT20-209ENST00000579419 TMC1Q8TDI8 760 aa22.53■■□□□ 1.2
IFT20-209ENST00000579419 SLC12A5Q9H2X9 1139 aa22.52■■□□□ 1.2
IFT20-209ENST00000579419 WWC3Q9ULE0 1092 aa22.52■■□□□ 1.2
IFT20-209ENST00000579419 MEGF6O75095 1541 aa22.51■■□□□ 1.19
IFT20-209ENST00000579419 FBLN1P23142 703 aa22.5■■□□□ 1.19
IFT20-209ENST00000579419 ZCRB1Q8TBF4 217 aaKnown RBP22.5■■□□□ 1.19
IFT20-209ENST00000579419 SIN3AQ96ST3 1273 aa22.5■■□□□ 1.19
IFT20-209ENST00000579419 EDC4Q6P2E9 1401 aaKnown RBP22.49■■□□□ 1.19
IFT20-209ENST00000579419 HDGFL2Q7Z4V5 671 aaPredicted RBP22.49■■□□□ 1.19
IFT20-209ENST00000579419 CD2APQ9Y5K6 639 aa22.49■■□□□ 1.19
IFT20-209ENST00000579419 USP47Q96K76 1375 aa22.49■■□□□ 1.19
IFT20-209ENST00000579419 FAM208AQ9UK61 1670 aaKnown RBP22.48■■□□□ 1.19
IFT20-209ENST00000579419 A0A1W2PP64 1363 aa22.48■■□□□ 1.19
IFT20-209ENST00000579419 HOXC9P31274 260 aa22.46■■□□□ 1.19
IFT20-209ENST00000579419 AMIGO3Q86WK7 504 aa22.46■■□□□ 1.19
IFT20-209ENST00000579419 MAP3K19Q56UN5 1328 aa22.46■■□□□ 1.19
IFT20-209ENST00000579419 SMIM5Q71RC9 77 aa22.45■■□□□ 1.18
IFT20-209ENST00000579419 KIF3CO14782 793 aa22.44■■□□□ 1.18
IFT20-209ENST00000579419 USHBP1Q8N6Y0 703 aa22.44■■□□□ 1.18
IFT20-209ENST00000579419 IGSF1Q8N6C5 1336 aa22.43■■□□□ 1.18
IFT20-209ENST00000579419 AMPHP49418 695 aa22.41■■□□□ 1.18
IFT20-209ENST00000579419 NEUROD1Q13562 356 aa22.41■■□□□ 1.18
IFT20-209ENST00000579419 NBPF6Q5VWK0 638 aa22.41■■□□□ 1.18
IFT20-209ENST00000579419 NBPF4Q96M43 638 aa22.41■■□□□ 1.18
IFT20-209ENST00000579419 TERF2IPQ9NYB0 399 aa22.4■■□□□ 1.18
IFT20-209ENST00000579419 RGPD2P0DJD1 1756 aa22.4■■□□□ 1.18
IFT20-209ENST00000579419 C5P01031 1676 aa22.39■■□□□ 1.18
IFT20-209ENST00000579419 PALLDQ8WX93 1383 aa22.39■■□□□ 1.18
IFT20-209ENST00000579419 FLAD1Q8NFF5 587 aa22.38■■□□□ 1.17
IFT20-209ENST00000579419 PHF14O94880 888 aa22.37■■□□□ 1.17
IFT20-209ENST00000579419 COG3Q96JB2 828 aa22.37■■□□□ 1.17
IFT20-209ENST00000579419 MPRIPQ6WCQ1 1025 aa22.36■■□□□ 1.17
IFT20-209ENST00000579419 CARD11Q9BXL7 1154 aa22.36■■□□□ 1.17
IFT20-209ENST00000579419 RRS1Q15050 365 aaKnown RBP22.35■■□□□ 1.17
IFT20-209ENST00000579419 AK7Q96M32 723 aa22.35■■□□□ 1.17
IFT20-209ENST00000579419 TOGARAM1Q9Y4F4 1720 aa22.34■■□□□ 1.17
IFT20-209ENST00000579419 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.33■■□□□ 1.17
IFT20-209ENST00000579419 DNAJC5GQ8N7S2 189 aa22.33■■□□□ 1.17
IFT20-209ENST00000579419 RAPGEF4Q8WZA2 1011 aa22.33■■□□□ 1.17
IFT20-209ENST00000579419 C4BP0C0L5 1744 aa22.32■■□□□ 1.16
IFT20-209ENST00000579419 TATP17735 454 aaPredicted RBP22.32■■□□□ 1.16
IFT20-209ENST00000579419 APLP1P51693 650 aa22.32■■□□□ 1.16
IFT20-209ENST00000579419 TAF1LQ8IZX4 1826 aa22.31■■□□□ 1.16
IFT20-209ENST00000579419 CGNL1Q0VF96 1302 aa22.31■■□□□ 1.16
IFT20-209ENST00000579419 RTL1A6NKG5 1358 aa22.3■■□□□ 1.16
IFT20-209ENST00000579419 CYP27B1O15528 508 aa22.3■■□□□ 1.16
IFT20-209ENST00000579419 PCDH11XQ9BZA7 1347 aa22.3■■□□□ 1.16
IFT20-209ENST00000579419 PCDH11YQ9BZA8 1340 aa22.3■■□□□ 1.16
IFT20-209ENST00000579419 LINC00116Q8NCU8 138 aa22.28■■□□□ 1.16
IFT20-209ENST00000579419 CICQ96RK0 1608 aaPredicted RBP22.28■■□□□ 1.16
IFT20-209ENST00000579419 PIGBQ92521 554 aa22.27■■□□□ 1.16
IFT20-209ENST00000579419 PUS7Q96PZ0 661 aaKnown RBP22.27■■□□□ 1.16
IFT20-209ENST00000579419 TOMM70O94826 608 aa22.26■■□□□ 1.15
IFT20-209ENST00000579419 HSP90AB2PQ58FF8 381 aa22.26■■□□□ 1.15
IFT20-209ENST00000579419 GGNBP2Q9H3C7 697 aa22.26■■□□□ 1.15
IFT20-209ENST00000579419 HTRA3P83110 453 aa22.25■■□□□ 1.15
IFT20-209ENST00000579419 SMARCC1Q92922 1105 aaPredicted RBP22.25■■□□□ 1.15
IFT20-209ENST00000579419 NMRK2Q9NPI5 230 aa22.25■■□□□ 1.15
IFT20-209ENST00000579419 PXDNLA1KZ92 1463 aa22.25■■□□□ 1.15
IFT20-209ENST00000579419 UBR3Q6ZT12 1888 aa22.25■■□□□ 1.15
IFT20-209ENST00000579419 SMG6Q86US8 1419 aaKnown RBP22.24■■□□□ 1.15
IFT20-209ENST00000579419 SSFA2P28290 1259 aa22.24■■□□□ 1.15
IFT20-209ENST00000579419 TESK2Q96S53 571 aa22.23■■□□□ 1.15
IFT20-209ENST00000579419 FYB1O15117 783 aa22.22■■□□□ 1.15
IFT20-209ENST00000579419 MMP10P09238 476 aa22.22■■□□□ 1.15
IFT20-209ENST00000579419 HMGB2P26583 209 aaKnown RBP22.22■■□□□ 1.15
IFT20-209ENST00000579419 ITPK1Q13572 414 aa22.22■■□□□ 1.15
IFT20-209ENST00000579419 BCS1LQ9Y276 419 aa22.22■■□□□ 1.15
IFT20-209ENST00000579419 LOC102724428A0A0B4J2F2 783 aa22.21■■□□□ 1.15
IFT20-209ENST00000579419 GNPATO15228 680 aa22.21■■□□□ 1.15
IFT20-209ENST00000579419 SIK1P57059 783 aa22.21■■□□□ 1.15
IFT20-209ENST00000579419 COL13A1Q5TAT6 717 aaPredicted RBP22.21■■□□□ 1.15
IFT20-209ENST00000579419 INSRP06213 1382 aa22.21■■□□□ 1.15
IFT20-209ENST00000579419 NSD3Q9BZ95 1437 aa22.21■■□□□ 1.15
IFT20-209ENST00000579419 A0A0G2JLW4 131 aa22.2■■□□□ 1.14
IFT20-209ENST00000579419 ITGB4P16144 1822 aa22.18■■□□□ 1.14
IFT20-209ENST00000579419 KIAA1551Q9HCM1 1747 aa22.18■■□□□ 1.14
IFT20-209ENST00000579419 CAPN15O75808 1086 aa22.18■■□□□ 1.14
IFT20-209ENST00000579419 ARHGAP27Q6ZUM4 889 aa22.18■■□□□ 1.14
IFT20-209ENST00000579419 ASAP1Q9ULH1 1129 aa22.18■■□□□ 1.14
IFT20-209ENST00000579419 MAP2P11137 1827 aaKnown RBP22.17■■□□□ 1.14
IFT20-209ENST00000579419 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
IFT20-209ENST00000579419 NKX1-1Q15270 411 aaPredicted RBP22.16■■□□□ 1.14
IFT20-209ENST00000579419 FLT4P35916 1363 aa22.15■■□□□ 1.14
IFT20-209ENST00000579419 DPEP1P16444 411 aa22.15■■□□□ 1.14
IFT20-209ENST00000579419 ATP6V1AP38606 617 aa22.15■■□□□ 1.14
IFT20-209ENST00000579419 TGFB2P61812 414 aa22.15■■□□□ 1.14
IFT20-209ENST00000579419 KLRG1Q96E93 195 aa22.15■■□□□ 1.14
IFT20-209ENST00000579419 C10orf71Q711Q0 1435 aa22.14■■□□□ 1.14
IFT20-209ENST00000579419 RBM46Q8TBY0 533 aaKnown RBP22.14■■□□□ 1.13
IFT20-209ENST00000579419 N4BP2Q86UW6 1770 aaPredicted RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms