RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 SLC16A10Q8TF71 515 aa14.94□□□□□ -0.02
CSNK1D-210ENST00000579308 GGNBP2Q9H3C7 697 aa14.94□□□□□ -0.02
CSNK1D-210ENST00000579308 RTL1A6NKG5 1358 aa14.94□□□□□ -0.02
CSNK1D-210ENST00000579308 MAP3K5Q99683 1374 aa14.94□□□□□ -0.02
CSNK1D-210ENST00000579308 KCNQ4P56696 695 aa14.93□□□□□ -0.02
CSNK1D-210ENST00000579308 CGNL1Q0VF96 1302 aa14.92□□□□□ -0.02
CSNK1D-210ENST00000579308 PNPLA7Q6ZV29 1317 aa14.92□□□□□ -0.02
CSNK1D-210ENST00000579308 MEGF6O75095 1541 aa14.92□□□□□ -0.02
CSNK1D-210ENST00000579308 BTAF1O14981 1849 aa14.92□□□□□ -0.02
CSNK1D-210ENST00000579308 SYTL4Q96C24 671 aaPredicted RBP14.92□□□□□ -0.02
CSNK1D-210ENST00000579308 USP47Q96K76 1375 aa14.92□□□□□ -0.02
CSNK1D-210ENST00000579308 HSP90AB2PQ58FF8 381 aa14.91□□□□□ -0.02
CSNK1D-210ENST00000579308 CARD14Q9BXL6 1004 aa14.91□□□□□ -0.02
CSNK1D-210ENST00000579308 INSRP06213 1382 aa14.9□□□□□ -0.02
CSNK1D-210ENST00000579308 TRIM26Q12899 539 aaPredicted RBP14.9□□□□□ -0.02
CSNK1D-210ENST00000579308 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
CSNK1D-210ENST00000579308 ZNF784Q8NCA9 323 aaPredicted RBP14.9□□□□□ -0.02
CSNK1D-210ENST00000579308 TFCP2L1Q9NZI6 479 aa14.9□□□□□ -0.02
CSNK1D-210ENST00000579308 FAM208AQ9UK61 1670 aaKnown RBP14.9□□□□□ -0.02
CSNK1D-210ENST00000579308 CDCA8Q53HL2 280 aa14.89□□□□□ -0.03
CSNK1D-210ENST00000579308 RAPGEF4Q8WZA2 1011 aa14.88□□□□□ -0.03
CSNK1D-210ENST00000579308 CCNL1Q9UK58 526 aaPredicted RBP14.88□□□□□ -0.03
CSNK1D-210ENST00000579308 GOLGB1Q14789 3259 aaKnown RBP14.88□□□□□ -0.03
CSNK1D-210ENST00000579308 KIF24Q5T7B8 1368 aa14.87□□□□□ -0.03
CSNK1D-210ENST00000579308 TATP17735 454 aaPredicted RBP14.87□□□□□ -0.03
CSNK1D-210ENST00000579308 POLD1P28340 1107 aa14.86□□□□□ -0.03
CSNK1D-210ENST00000579308 FLT4P35916 1363 aa14.85□□□□□ -0.03
CSNK1D-210ENST00000579308 CYP27B1O15528 508 aa14.85□□□□□ -0.03
CSNK1D-210ENST00000579308 COL23A1Q86Y22 540 aaPredicted RBP14.85□□□□□ -0.03
CSNK1D-210ENST00000579308 SMG6Q86US8 1419 aaKnown RBP14.84□□□□□ -0.03
CSNK1D-210ENST00000579308 TIMELESSQ9UNS1 1208 aa14.84□□□□□ -0.03
CSNK1D-210ENST00000579308 EMILIN1Q9Y6C2 1016 aa14.84□□□□□ -0.03
CSNK1D-210ENST00000579308 KAT6BQ8WYB5 2073 aa14.84□□□□□ -0.03
CSNK1D-210ENST00000579308 PCDH11XQ9BZA7 1347 aa14.84□□□□□ -0.03
CSNK1D-210ENST00000579308 PCDH11YQ9BZA8 1340 aa14.84□□□□□ -0.03
CSNK1D-210ENST00000579308 GPR162Q16538 588 aa14.83□□□□□ -0.04
CSNK1D-210ENST00000579308 SHANK3Q9BYB0 1731 aa14.83□□□□□ -0.04
CSNK1D-210ENST00000579308 NKX1-1Q15270 411 aaPredicted RBP14.82□□□□□ -0.04
CSNK1D-210ENST00000579308 NLGN2Q8NFZ4 835 aa14.82□□□□□ -0.04
CSNK1D-210ENST00000579308 WASHC2AQ641Q2 1341 aa14.82□□□□□ -0.04
CSNK1D-210ENST00000579308 RGPD2P0DJD1 1756 aa14.82□□□□□ -0.04
CSNK1D-210ENST00000579308 NSD3Q9BZ95 1437 aa14.82□□□□□ -0.04
CSNK1D-210ENST00000579308 MPRIPQ6WCQ1 1025 aa14.81□□□□□ -0.04
CSNK1D-210ENST00000579308 NCAPD2Q15021 1401 aa14.81□□□□□ -0.04
CSNK1D-210ENST00000579308 LY75O60449 1722 aa14.8□□□□□ -0.04
CSNK1D-210ENST00000579308 COL24A1Q17RW2 1714 aa14.8□□□□□ -0.04
CSNK1D-210ENST00000579308 QSER1Q2KHR3 1735 aa14.8□□□□□ -0.04
CSNK1D-210ENST00000579308 HMGB2P26583 209 aaKnown RBP14.8□□□□□ -0.04
CSNK1D-210ENST00000579308 PIGBQ92521 554 aa14.8□□□□□ -0.04
CSNK1D-210ENST00000579308 PALLDQ8WX93 1383 aa14.8□□□□□ -0.04
CSNK1D-210ENST00000579308 DOT1LQ8TEK3 1739 aa14.8□□□□□ -0.04
CSNK1D-210ENST00000579308 KLHL34Q8N239 644 aa14.79□□□□□ -0.04
CSNK1D-210ENST00000579308 SMARCC1Q92922 1105 aaPredicted RBP14.79□□□□□ -0.04
CSNK1D-210ENST00000579308 EYA1Q99502 592 aa14.79□□□□□ -0.04
CSNK1D-210ENST00000579308 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.79□□□□□ -0.04
CSNK1D-210ENST00000579308 POLKQ9UBT6 870 aa14.79□□□□□ -0.04
CSNK1D-210ENST00000579308 PPM1GO15355 546 aaPredicted RBP14.78□□□□□ -0.04
CSNK1D-210ENST00000579308 AMIGO3Q86WK7 504 aa14.78□□□□□ -0.04
CSNK1D-210ENST00000579308 FLAD1Q8NFF5 587 aa14.78□□□□□ -0.04
CSNK1D-210ENST00000579308 YBX3P16989 372 aaKnown RBP eCLIP14.77□□□□□ -0.05
CSNK1D-210ENST00000579308 MSL1Q68DK7 614 aa14.77□□□□□ -0.05
CSNK1D-210ENST00000579308 SPG7Q9UQ90 795 aa14.77□□□□□ -0.05
CSNK1D-210ENST00000579308 C1QTNF8P60827 252 aa14.76□□□□□ -0.05
CSNK1D-210ENST00000579308 CD2APQ9Y5K6 639 aa14.76□□□□□ -0.05
CSNK1D-210ENST00000579308 CLSPNQ9HAW4 1339 aa14.75□□□□□ -0.05
CSNK1D-210ENST00000579308 GRIN3BO60391 1043 aa14.75□□□□□ -0.05
CSNK1D-210ENST00000579308 PELP1Q8IZL8 1130 aaKnown RBP14.75□□□□□ -0.05
CSNK1D-210ENST00000579308 TUBGCP6Q96RT7 1819 aa14.75□□□□□ -0.05
CSNK1D-210ENST00000579308 LOC102724428A0A0B4J2F2 783 aa14.74□□□□□ -0.05
CSNK1D-210ENST00000579308 SIK1P57059 783 aa14.74□□□□□ -0.05
CSNK1D-210ENST00000579308 PHKG2P15735 406 aa14.73□□□□□ -0.05
CSNK1D-210ENST00000579308 EIF4A2Q14240 407 aaKnown RBP14.73□□□□□ -0.05
CSNK1D-210ENST00000579308 SMIM5Q71RC9 77 aa14.73□□□□□ -0.05
CSNK1D-210ENST00000579308 LINC00116Q8NCU8 138 aa14.73□□□□□ -0.05
CSNK1D-210ENST00000579308 AK7Q96M32 723 aa14.73□□□□□ -0.05
CSNK1D-210ENST00000579308 ASAP1Q9ULH1 1129 aa14.73□□□□□ -0.05
CSNK1D-210ENST00000579308 KIF20BQ96Q89 1820 aa14.72□□□□□ -0.05
CSNK1D-210ENST00000579308 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.72□□□□□ -0.05
CSNK1D-210ENST00000579308 IFNL2Q8IZJ0 200 aa14.72□□□□□ -0.05
CSNK1D-210ENST00000579308 TMOD3Q9NYL9 352 aa14.72□□□□□ -0.05
CSNK1D-210ENST00000579308 SSFA2P28290 1259 aa14.71□□□□□ -0.05
CSNK1D-210ENST00000579308 MAPK8IP2Q13387 824 aaPredicted RBP14.71□□□□□ -0.05
CSNK1D-210ENST00000579308 ITPK1Q13572 414 aa14.71□□□□□ -0.05
CSNK1D-210ENST00000579308 ATG3Q9NT62 314 aa14.71□□□□□ -0.05
CSNK1D-210ENST00000579308 CHD4Q14839 1912 aa14.7□□□□□ -0.06
CSNK1D-210ENST00000579308 TNNT2P45379 298 aaPredicted RBP14.7□□□□□ -0.06
CSNK1D-210ENST00000579308 PLEKHG2Q9H7P9 1386 aa14.7□□□□□ -0.06
CSNK1D-210ENST00000579308 PKD1L3Q7Z443 1732 aa14.69□□□□□ -0.06
CSNK1D-210ENST00000579308 TOGARAM1Q9Y4F4 1720 aa14.69□□□□□ -0.06
CSNK1D-210ENST00000579308 PHF14O94880 888 aa14.69□□□□□ -0.06
CSNK1D-210ENST00000579308 PANK3Q9H999 370 aa14.69□□□□□ -0.06
CSNK1D-210ENST00000579308 IGSF1Q8N6C5 1336 aa14.68□□□□□ -0.06
CSNK1D-210ENST00000579308 C5P01031 1676 aa14.68□□□□□ -0.06
CSNK1D-210ENST00000579308 ATP6V1AP38606 617 aa14.68□□□□□ -0.06
CSNK1D-210ENST00000579308 POLR3GLQ9BT43 218 aa14.68□□□□□ -0.06
CSNK1D-210ENST00000579308 PCGF6Q9BYE7 350 aa14.68□□□□□ -0.06
CSNK1D-210ENST00000579308 ANKRD26Q9UPS8 1709 aa14.68□□□□□ -0.06
CSNK1D-210ENST00000579308 C4BP0C0L5 1744 aa14.67□□□□□ -0.06
CSNK1D-210ENST00000579308 SENP3-EIF4A1A0A087X0R7 540 aa14.67□□□□□ -0.06
CSNK1D-210ENST00000579308 ERVV-2B6SEH9 535 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms