RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 RNF123Q5XPI4 1314 aa17.2■□□□□ 0.34
CTC1-203ENST00000578240 E9PSI1 815 aa17.2■□□□□ 0.34
CTC1-203ENST00000578240 MTHFSDQ2M296 383 aaKnown RBP17.2■□□□□ 0.34
CTC1-203ENST00000578240 FAM83GA6ND36 823 aa17.19■□□□□ 0.34
CTC1-203ENST00000578240 THUMPD2Q9BTF0 503 aaKnown RBP17.19■□□□□ 0.34
CTC1-203ENST00000578240 PRDM11Q9NQV5 511 aa17.19■□□□□ 0.34
CTC1-203ENST00000578240 ZNF772Q68DY9 489 aaPredicted RBP17.18■□□□□ 0.34
CTC1-203ENST00000578240 NEFMP07197 916 aa17.17■□□□□ 0.34
CTC1-203ENST00000578240 IL16Q14005 1332 aa17.17■□□□□ 0.34
CTC1-203ENST00000578240 FANCIQ9NVI1 1328 aa17.17■□□□□ 0.34
CTC1-203ENST00000578240 CRB1P82279 1406 aa17.16■□□□□ 0.34
CTC1-203ENST00000578240 WDR17Q8IZU2 1322 aa17.15■□□□□ 0.34
CTC1-203ENST00000578240 DCTN1Q14203 1278 aa17.15■□□□□ 0.34
CTC1-203ENST00000578240 MAP3K5Q99683 1374 aa17.14■□□□□ 0.34
CTC1-203ENST00000578240 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.14■□□□□ 0.33
CTC1-203ENST00000578240 TOGARAM1Q9Y4F4 1720 aa17.14■□□□□ 0.33
CTC1-203ENST00000578240 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
CTC1-203ENST00000578240 TSR2Q969E8 191 aaKnown RBP17.14■□□□□ 0.33
CTC1-203ENST00000578240 C8orf37Q96NL8 207 aa17.13■□□□□ 0.33
CTC1-203ENST00000578240 RCAN3Q9UKA8 241 aa17.13■□□□□ 0.33
CTC1-203ENST00000578240 AFF2P51816 1311 aa17.13■□□□□ 0.33
CTC1-203ENST00000578240 PLEKHG2Q9H7P9 1386 aa17.13■□□□□ 0.33
CTC1-203ENST00000578240 ADAMTS2O95450 1211 aa17.13■□□□□ 0.33
CTC1-203ENST00000578240 ZNF853P0CG23 659 aa17.13■□□□□ 0.33
CTC1-203ENST00000578240 OVOS2A0A0G2JMS6 1433 aa17.12■□□□□ 0.33
CTC1-203ENST00000578240 LMOD3Q0VAK6 560 aa17.12■□□□□ 0.33
CTC1-203ENST00000578240 MCM10Q7L590 875 aa17.12■□□□□ 0.33
CTC1-203ENST00000578240 GAS2L2Q8NHY3 880 aa17.12■□□□□ 0.33
CTC1-203ENST00000578240 NLRP2Q9NX02 1062 aa17.12■□□□□ 0.33
CTC1-203ENST00000578240 SLIT2O94813 1529 aa17.11■□□□□ 0.33
CTC1-203ENST00000578240 CEMIPQ8WUJ3 1361 aa17.1■□□□□ 0.33
CTC1-203ENST00000578240 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
CTC1-203ENST00000578240 CACNA1FO60840 1977 aa17.1■□□□□ 0.33
CTC1-203ENST00000578240 CSB-PGBD3P0DP91 1061 aa17.09■□□□□ 0.33
CTC1-203ENST00000578240 LARP1Q6PKG0 1096 aaKnown RBP17.09■□□□□ 0.33
CTC1-203ENST00000578240 NGLY1Q96IV0 654 aa17.09■□□□□ 0.33
CTC1-203ENST00000578240 IFT57Q9NWB7 429 aa17.09■□□□□ 0.33
CTC1-203ENST00000578240 MRC1P22897 1456 aa17.09■□□□□ 0.33
CTC1-203ENST00000578240 ITGB4P16144 1822 aa17.09■□□□□ 0.33
CTC1-203ENST00000578240 DISP2A7MBM2 1401 aa17.08■□□□□ 0.32
CTC1-203ENST00000578240 KDM6AO15550 1401 aaPredicted RBP17.08■□□□□ 0.32
CTC1-203ENST00000578240 IRX6P78412 446 aaPredicted RBP17.08■□□□□ 0.32
CTC1-203ENST00000578240 PAPPAQ13219 1627 aa17.08■□□□□ 0.32
CTC1-203ENST00000578240 GNAT3A8MTJ3 354 aa17.07■□□□□ 0.32
CTC1-203ENST00000578240 RXRBP28702 533 aa17.07■□□□□ 0.32
CTC1-203ENST00000578240 RRP1P56182 461 aaKnown RBP17.07■□□□□ 0.32
CTC1-203ENST00000578240 MBIPQ9NS73 344 aa17.07■□□□□ 0.32
CTC1-203ENST00000578240 BTG4Q9NY30 223 aa17.07■□□□□ 0.32
CTC1-203ENST00000578240 GLI3P10071 1580 aa17.07■□□□□ 0.32
CTC1-203ENST00000578240 EXOSC9Q06265 439 aaKnown RBP17.07■□□□□ 0.32
CTC1-203ENST00000578240 IL17REQ8NFR9 667 aa17.07■□□□□ 0.32
CTC1-203ENST00000578240 CFAP44Q96MT7 982 aa17.07■□□□□ 0.32
CTC1-203ENST00000578240 C5P01031 1676 aa17.06■□□□□ 0.32
CTC1-203ENST00000578240 UBR2Q8IWV8 1755 aa17.06■□□□□ 0.32
CTC1-203ENST00000578240 HTATSF1O43719 755 aaKnown RBP17.06■□□□□ 0.32
CTC1-203ENST00000578240 FKBP8Q14318 412 aa17.06■□□□□ 0.32
CTC1-203ENST00000578240 ZNF530Q6P9A1 599 aaPredicted RBP17.06■□□□□ 0.32
CTC1-203ENST00000578240 GNAI1P63096 354 aa17.05■□□□□ 0.32
CTC1-203ENST00000578240 CALD1Q05682 793 aaKnown RBP17.05■□□□□ 0.32
CTC1-203ENST00000578240 CARD10Q9BWT7 1032 aa17.05■□□□□ 0.32
CTC1-203ENST00000578240 STRN4Q9NRL3 753 aa17.05■□□□□ 0.32
CTC1-203ENST00000578240 AMOTQ4VCS5 1084 aa17.04■□□□□ 0.32
CTC1-203ENST00000578240 TOM1L2Q6ZVM7 507 aa17.04■□□□□ 0.32
CTC1-203ENST00000578240 CHL1O00533 1208 aa17.04■□□□□ 0.32
CTC1-203ENST00000578240 PLEKHO1Q53GL0 409 aaPredicted RBP17.04■□□□□ 0.32
CTC1-203ENST00000578240 AKAP4Q5JQC9 854 aa17.04■□□□□ 0.32
CTC1-203ENST00000578240 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
CTC1-203ENST00000578240 QTRT2Q9H974 415 aaKnown RBP17.04■□□□□ 0.32
CTC1-203ENST00000578240 USP21Q9UK80 565 aa17.04■□□□□ 0.32
CTC1-203ENST00000578240 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
CTC1-203ENST00000578240 LAS1LQ9Y4W2 734 aaKnown RBP17.03■□□□□ 0.32
CTC1-203ENST00000578240 N4BP2Q86UW6 1770 aaPredicted RBP17.02■□□□□ 0.32
CTC1-203ENST00000578240 BCAR3O75815 825 aa17.02■□□□□ 0.32
CTC1-203ENST00000578240 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.32
CTC1-203ENST00000578240 RARSP54136 660 aaKnown RBP17.02■□□□□ 0.32
CTC1-203ENST00000578240 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
CTC1-203ENST00000578240 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.02■□□□□ 0.328e-7■■■□□ 14.7
CTC1-203ENST00000578240 PLIN1O60240 522 aa17.01■□□□□ 0.31
CTC1-203ENST00000578240 RBM6P78332 1123 aaKnown RBP17.01■□□□□ 0.31
CTC1-203ENST00000578240 FNBP4Q8N3X1 1017 aaPredicted RBP17.01■□□□□ 0.31
CTC1-203ENST00000578240 TSPYL6Q8N831 410 aa17.01■□□□□ 0.31
CTC1-203ENST00000578240 RTF1Q92541 710 aaKnown RBP17.01■□□□□ 0.31
CTC1-203ENST00000578240 LAMB4A4D0S4 1761 aa17.01■□□□□ 0.31
CTC1-203ENST00000578240 BCL9LQ86UU0 1499 aa17.01■□□□□ 0.31
CTC1-203ENST00000578240 CYP27B1O15528 508 aa17.01■□□□□ 0.31
CTC1-203ENST00000578240 NEFLP07196 543 aa17.01■□□□□ 0.31
CTC1-203ENST00000578240 CT47B1P0C2W7 299 aaPredicted RBP17■□□□□ 0.31
CTC1-203ENST00000578240 PHKG2P15735 406 aa17■□□□□ 0.31
CTC1-203ENST00000578240 KRT24Q2M2I5 525 aa17■□□□□ 0.31
CTC1-203ENST00000578240 TRPC5Q9UL62 973 aaPredicted RBP17■□□□□ 0.31
CTC1-203ENST00000578240 THSD7AQ9UPZ6 1657 aa16.99■□□□□ 0.31
CTC1-203ENST00000578240 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
CTC1-203ENST00000578240 MPRIPQ6WCQ1 1025 aa16.99■□□□□ 0.31
CTC1-203ENST00000578240 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
CTC1-203ENST00000578240 MIS18AQ9NYP9 233 aa16.99■□□□□ 0.31
CTC1-203ENST00000578240 KAT6BQ8WYB5 2073 aa16.98■□□□□ 0.31
CTC1-203ENST00000578240 IL2RBP14784 551 aa16.97■□□□□ 0.31
CTC1-203ENST00000578240 EVA1CP58658 441 aa16.97■□□□□ 0.31
CTC1-203ENST00000578240 C1orf141Q5JVX7 400 aa16.97■□□□□ 0.31
CTC1-203ENST00000578240 C20orf194Q5TEA3 1177 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms