RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 VRTNQ9H8Y1 702 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 PGPEP1Q9NXJ5 209 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 TFIP11Q9UBB9 837 aaKnown RBP4.74□□□□□ -1.65
COPS3-213ENST00000577210 DOLKQ9UPQ8 538 aa4.74□□□□□ -1.65
COPS3-213ENST00000577210 SOBPA7XYQ1 873 aa4.73□□□□□ -1.65
COPS3-213ENST00000577210 LMOD1P29536 600 aaPredicted RBP4.73□□□□□ -1.65
COPS3-213ENST00000577210 LARP1Q6PKG0 1096 aaKnown RBP4.73□□□□□ -1.65
COPS3-213ENST00000577210 PLPP7Q8NBV4 271 aa4.73□□□□□ -1.65
COPS3-213ENST00000577210 PURBQ96QR8 312 aaKnown RBP4.73□□□□□ -1.65
COPS3-213ENST00000577210 ZFAND3Q9H8U3 227 aa4.73□□□□□ -1.65
COPS3-213ENST00000577210 CHIC2Q9UKJ5 165 aa4.73□□□□□ -1.65
COPS3-213ENST00000577210 NOD1Q9Y239 953 aa4.73□□□□□ -1.65
COPS3-213ENST00000577210 MAFBQ9Y5Q3 323 aaPredicted RBP4.73□□□□□ -1.65
COPS3-213ENST00000577210 EMILIN1Q9Y6C2 1016 aa4.73□□□□□ -1.65
COPS3-213ENST00000577210 USP17L3A6NCW0 530 aa4.72□□□□□ -1.65
COPS3-213ENST00000577210 USP17L4A6NCW7 530 aa4.72□□□□□ -1.65
COPS3-213ENST00000577210 USP17L5A8MUK1 530 aa4.72□□□□□ -1.65
COPS3-213ENST00000577210 GIGYF1O75420 1035 aaPredicted RBP4.72□□□□□ -1.65
COPS3-213ENST00000577210 MRPL14Q6P1L8 145 aaKnown RBP4.72□□□□□ -1.65
COPS3-213ENST00000577210 USP17L2Q6R6M4 530 aa4.72□□□□□ -1.65
COPS3-213ENST00000577210 USP17L1Q7RTZ2 530 aa4.72□□□□□ -1.65
COPS3-213ENST00000577210 CCDC116Q8IYX3 515 aa4.72□□□□□ -1.65
COPS3-213ENST00000577210 PHTF2Q8N3S3 785 aa4.72□□□□□ -1.65
COPS3-213ENST00000577210 ITPKCQ96DU7 683 aa4.72□□□□□ -1.65
COPS3-213ENST00000577210 PATL2C9JE40 543 aaKnown RBP4.71□□□□□ -1.66
COPS3-213ENST00000577210 ZIC2O95409 532 aaPredicted RBP4.71□□□□□ -1.66
COPS3-213ENST00000577210 CSB-PGBD3P0DP91 1061 aa4.71□□□□□ -1.66
COPS3-213ENST00000577210 RFX1P22670 979 aa4.71□□□□□ -1.66
COPS3-213ENST00000577210 FSHRP23945 695 aa4.71□□□□□ -1.66
COPS3-213ENST00000577210 GRM5P41594 1212 aa4.71□□□□□ -1.66
COPS3-213ENST00000577210 CFAP70Q5T0N1 1121 aa4.71□□□□□ -1.66
COPS3-213ENST00000577210 B4GALNT3Q6L9W6 998 aa4.71□□□□□ -1.66
COPS3-213ENST00000577210 TBC1D9Q6ZT07 1266 aa4.71□□□□□ -1.66
COPS3-213ENST00000577210 UCN2Q96RP3 112 aa4.71□□□□□ -1.66
COPS3-213ENST00000577210 NXF1Q9UBU9 619 aaKnown RBP4.71□□□□□ -1.66
COPS3-213ENST00000577210 PCDHB11Q9Y5F2 797 aa4.71□□□□□ -1.66
COPS3-213ENST00000577210 ERBB4Q15303 1308 aa4.71□□□□□ -1.66
COPS3-213ENST00000577210 FAM196BA6NMK8 535 aa4.7□□□□□ -1.66
COPS3-213ENST00000577210 H3BM21 787 aa4.7□□□□□ -1.66
COPS3-213ENST00000577210 ATG7O95352 703 aa4.7□□□□□ -1.66
COPS3-213ENST00000577210 GMPRP36959 345 aa4.7□□□□□ -1.66
COPS3-213ENST00000577210 ELOAQ14241 798 aaKnown RBP4.7□□□□□ -1.66
COPS3-213ENST00000577210 INTS6LQ5JSJ4 861 aaKnown RBP4.7□□□□□ -1.66
COPS3-213ENST00000577210 CC2D2BQ6DHV5 1058 aa4.7□□□□□ -1.66
COPS3-213ENST00000577210 LARGE2Q8N3Y3 721 aa4.7□□□□□ -1.66
COPS3-213ENST00000577210 MKRN1Q9UHC7 482 aaKnown RBP4.7□□□□□ -1.66
COPS3-213ENST00000577210 USTQ9Y2C2 406 aa4.7□□□□□ -1.66
COPS3-213ENST00000577210 FAM181BA6NEQ2 426 aa4.69□□□□□ -1.66
COPS3-213ENST00000577210 RASA1P20936 1047 aa4.69□□□□□ -1.66
COPS3-213ENST00000577210 NCOA4Q13772 614 aa4.69□□□□□ -1.66
COPS3-213ENST00000577210 ESCO1Q5FWF5 840 aa4.69□□□□□ -1.66
COPS3-213ENST00000577210 C6orf118Q5T5N4 469 aa4.69□□□□□ -1.66
COPS3-213ENST00000577210 ERVH48-1M5A8F1 160 aa4.68□□□□□ -1.66
COPS3-213ENST00000577210 PDIA4P13667 645 aaKnown RBP4.68□□□□□ -1.66
COPS3-213ENST00000577210 LORP23490 312 aaPredicted RBP4.68□□□□□ -1.66
COPS3-213ENST00000577210 ERVK-9P63128 1117 aa4.68□□□□□ -1.66
COPS3-213ENST00000577210 SCARF1Q14162 830 aa4.68□□□□□ -1.66
COPS3-213ENST00000577210 OXLD1Q5BKU9 147 aa4.68□□□□□ -1.66
COPS3-213ENST00000577210 CYP2U1Q7Z449 544 aa4.68□□□□□ -1.66
COPS3-213ENST00000577210 MEIOBQ8N635 442 aa4.68□□□□□ -1.66
COPS3-213ENST00000577210 PIK3CDO00329 1044 aa4.67□□□□□ -1.66
COPS3-213ENST00000577210 BACH1O14867 736 aa4.67□□□□□ -1.66
COPS3-213ENST00000577210 UPP2O95045 317 aa4.67□□□□□ -1.66
COPS3-213ENST00000577210 RAB15P59190 212 aa4.67□□□□□ -1.66
COPS3-213ENST00000577210 PSME1Q06323 249 aa4.67□□□□□ -1.66
COPS3-213ENST00000577210 PPP1R26Q5T8A7 1209 aaPredicted RBP4.67□□□□□ -1.66
COPS3-213ENST00000577210 LINC00528Q8N1L1 170 aa4.67□□□□□ -1.66
COPS3-213ENST00000577210 OGFOD1Q8N543 542 aa4.67□□□□□ -1.66
COPS3-213ENST00000577210 SLC16A10Q8TF71 515 aa4.67□□□□□ -1.66
COPS3-213ENST00000577210 CDCA7Q9BWT1 371 aaPredicted RBP4.67□□□□□ -1.66
COPS3-213ENST00000577210 DNAAF2Q9NVR5 837 aaKnown RBP4.67□□□□□ -1.66
COPS3-213ENST00000577210 M0R2N6 131 aa4.66□□□□□ -1.66
COPS3-213ENST00000577210 GNRH1P01148 92 aa4.66□□□□□ -1.66
COPS3-213ENST00000577210 BMP2P12643 396 aa4.66□□□□□ -1.66
COPS3-213ENST00000577210 GTF2IP78347 998 aa4.66□□□□□ -1.66
COPS3-213ENST00000577210 SWI5Q1ZZU3 235 aa4.66□□□□□ -1.66
COPS3-213ENST00000577210 KANK4Q5T7N3 995 aaPredicted RBP4.66□□□□□ -1.66
COPS3-213ENST00000577210 NPAS3Q8IXF0 933 aa4.66□□□□□ -1.66
COPS3-213ENST00000577210 SIX5Q8N196 739 aa4.66□□□□□ -1.66
COPS3-213ENST00000577210 KCTD17Q8N5Z5 321 aa4.66□□□□□ -1.66
COPS3-213ENST00000577210 FAM200AQ8TCP9 573 aa4.66□□□□□ -1.66
COPS3-213ENST00000577210 IRF7Q92985 503 aa4.66□□□□□ -1.66
COPS3-213ENST00000577210 CCDC85AQ96PX6 553 aaPredicted RBP4.66□□□□□ -1.66
COPS3-213ENST00000577210 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L15C9J2P7 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L10C9JJH3 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L13C9JLJ4 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L12C9JPN9 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L11C9JVI0 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L21D6R901 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L18D6R9N7 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L22D6RA61 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L17D6RBQ6 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L19D6RCP7 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 USP17L20D6RJB6 530 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 WASLO00401 505 aaPredicted RBP4.65□□□□□ -1.67
COPS3-213ENST00000577210 MAN1A2O60476 641 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 GTF2E1P29083 439 aaPredicted RBP4.65□□□□□ -1.67
COPS3-213ENST00000577210 SEC13P55735 322 aa4.65□□□□□ -1.67
COPS3-213ENST00000577210 SRPK2P78362 688 aaKnown RBP4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms