RNA–Protein interactions for RNA: ENST00000576957.1

ATP2A3-215, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 1,159 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-215ENST00000576957 SYT17Q9BSW7 474 aa18.43■□□□□ 0.54
ATP2A3-215ENST00000576957 FHDC1Q9C0D6 1143 aaPredicted RBP18.42■□□□□ 0.54
ATP2A3-215ENST00000576957 CGNL1Q0VF96 1302 aa18.42■□□□□ 0.54
ATP2A3-215ENST00000576957 ZNF827Q17R98 1081 aa18.41■□□□□ 0.54
ATP2A3-215ENST00000576957 SLC16A10Q8TF71 515 aa18.41■□□□□ 0.54
ATP2A3-215ENST00000576957 AKT1S1Q96B36 256 aa18.41■□□□□ 0.54
ATP2A3-215ENST00000576957 PRIM1P49642 420 aaKnown RBP18.4■□□□□ 0.54
ATP2A3-215ENST00000576957 RRS1Q15050 365 aaKnown RBP18.4■□□□□ 0.54
ATP2A3-215ENST00000576957 ARXQ96QS3 562 aa18.4■□□□□ 0.54
ATP2A3-215ENST00000576957 GGNBP2Q9H3C7 697 aa18.4■□□□□ 0.54
ATP2A3-215ENST00000576957 SMG6Q86US8 1419 aaKnown RBP18.4■□□□□ 0.54
ATP2A3-215ENST00000576957 SYTL4Q96C24 671 aaPredicted RBP18.39■□□□□ 0.53
ATP2A3-215ENST00000576957 RGPD2P0DJD1 1756 aa18.39■□□□□ 0.53
ATP2A3-215ENST00000576957 KIF24Q5T7B8 1368 aa18.39■□□□□ 0.53
ATP2A3-215ENST00000576957 MAP3K5Q99683 1374 aa18.39■□□□□ 0.53
ATP2A3-215ENST00000576957 MEGF6O75095 1541 aa18.39■□□□□ 0.53
ATP2A3-215ENST00000576957 QSER1Q2KHR3 1735 aa18.38■□□□□ 0.53
ATP2A3-215ENST00000576957 NBPF6Q5VWK0 638 aa18.38■□□□□ 0.53
ATP2A3-215ENST00000576957 NBPF4Q96M43 638 aa18.38■□□□□ 0.53
ATP2A3-215ENST00000576957 SHANK3Q9BYB0 1731 aa18.37■□□□□ 0.53
ATP2A3-215ENST00000576957 RAPGEF4Q8WZA2 1011 aa18.37■□□□□ 0.53
ATP2A3-215ENST00000576957 TIMELESSQ9UNS1 1208 aa18.37■□□□□ 0.53
ATP2A3-215ENST00000576957 INSRP06213 1382 aa18.37■□□□□ 0.53
ATP2A3-215ENST00000576957 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
ATP2A3-215ENST00000576957 LY75O60449 1722 aa18.36■□□□□ 0.53
ATP2A3-215ENST00000576957 NSD2O96028 1365 aa18.36■□□□□ 0.53
ATP2A3-215ENST00000576957 FLT4P35916 1363 aa18.35■□□□□ 0.53
ATP2A3-215ENST00000576957 TATP17735 454 aaPredicted RBP18.35■□□□□ 0.53
ATP2A3-215ENST00000576957 TFCP2L1Q9NZI6 479 aa18.35■□□□□ 0.53
ATP2A3-215ENST00000576957 KIF20BQ96Q89 1820 aa18.35■□□□□ 0.53
ATP2A3-215ENST00000576957 PNPLA7Q6ZV29 1317 aa18.34■□□□□ 0.53
ATP2A3-215ENST00000576957 HMGB2P26583 209 aaKnown RBP18.34■□□□□ 0.53
ATP2A3-215ENST00000576957 HSP90AB2PQ58FF8 381 aa18.34■□□□□ 0.53
ATP2A3-215ENST00000576957 POLD1P28340 1107 aa18.33■□□□□ 0.52
ATP2A3-215ENST00000576957 USHBP1Q8N6Y0 703 aa18.33■□□□□ 0.52
ATP2A3-215ENST00000576957 COL24A1Q17RW2 1714 aa18.32■□□□□ 0.52
ATP2A3-215ENST00000576957 PCDH11XQ9BZA7 1347 aa18.32■□□□□ 0.52
ATP2A3-215ENST00000576957 PCDH11YQ9BZA8 1340 aa18.32■□□□□ 0.52
ATP2A3-215ENST00000576957 CCNL1Q9UK58 526 aaPredicted RBP18.32■□□□□ 0.52
ATP2A3-215ENST00000576957 KCNQ4P56696 695 aa18.31■□□□□ 0.52
ATP2A3-215ENST00000576957 CARD14Q9BXL6 1004 aa18.31■□□□□ 0.52
ATP2A3-215ENST00000576957 UTRNP46939 3433 aa18.31■□□□□ 0.52
ATP2A3-215ENST00000576957 TUBGCP6Q96RT7 1819 aa18.29■□□□□ 0.52
ATP2A3-215ENST00000576957 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
ATP2A3-215ENST00000576957 CHD4Q14839 1912 aa18.28■□□□□ 0.52
ATP2A3-215ENST00000576957 ZNF784Q8NCA9 323 aaPredicted RBP18.27■□□□□ 0.52
ATP2A3-215ENST00000576957 EMILIN1Q9Y6C2 1016 aa18.27■□□□□ 0.52
ATP2A3-215ENST00000576957 NCAPD2Q15021 1401 aa18.26■□□□□ 0.51
ATP2A3-215ENST00000576957 GTF3C3Q9Y5Q9 886 aa18.26■□□□□ 0.51
ATP2A3-215ENST00000576957 CYP27B1O15528 508 aa18.25■□□□□ 0.51
ATP2A3-215ENST00000576957 GPR162Q16538 588 aa18.25■□□□□ 0.51
ATP2A3-215ENST00000576957 WASHC2AQ641Q2 1341 aa18.24■□□□□ 0.51
ATP2A3-215ENST00000576957 COL23A1Q86Y22 540 aaPredicted RBP18.24■□□□□ 0.51
ATP2A3-215ENST00000576957 FLAD1Q8NFF5 587 aa18.24■□□□□ 0.51
ATP2A3-215ENST00000576957 SMARCC1Q92922 1105 aaPredicted RBP18.24■□□□□ 0.51
ATP2A3-215ENST00000576957 PKD1L3Q7Z443 1732 aa18.23■□□□□ 0.51
ATP2A3-215ENST00000576957 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
ATP2A3-215ENST00000576957 PALLDQ8WX93 1383 aa18.23■□□□□ 0.51
ATP2A3-215ENST00000576957 NKX1-1Q15270 411 aaPredicted RBP18.23■□□□□ 0.51
ATP2A3-215ENST00000576957 MPRIPQ6WCQ1 1025 aa18.23■□□□□ 0.51
ATP2A3-215ENST00000576957 KLHL34Q8N239 644 aa18.23■□□□□ 0.51
ATP2A3-215ENST00000576957 SPG7Q9UQ90 795 aa18.23■□□□□ 0.51
ATP2A3-215ENST00000576957 C5P01031 1676 aa18.22■□□□□ 0.51
ATP2A3-215ENST00000576957 PPM1GO15355 546 aaPredicted RBP18.22■□□□□ 0.51
ATP2A3-215ENST00000576957 MSH5O43196 834 aa18.22■□□□□ 0.51
ATP2A3-215ENST00000576957 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.22■□□□□ 0.51
ATP2A3-215ENST00000576957 MAP2P11137 1827 aaKnown RBP18.21■□□□□ 0.51
ATP2A3-215ENST00000576957 ITGB4P16144 1822 aa18.2■□□□□ 0.5
ATP2A3-215ENST00000576957 TAF1LQ8IZX4 1826 aa18.2■□□□□ 0.5
ATP2A3-215ENST00000576957 EYA1Q99502 592 aa18.19■□□□□ 0.5
ATP2A3-215ENST00000576957 POLKQ9UBT6 870 aa18.19■□□□□ 0.5
ATP2A3-215ENST00000576957 TOGARAM1Q9Y4F4 1720 aa18.19■□□□□ 0.5
ATP2A3-215ENST00000576957 PLEKHG2Q9H7P9 1386 aa18.18■□□□□ 0.5
ATP2A3-215ENST00000576957 NLGN2Q8NFZ4 835 aa18.18■□□□□ 0.5
ATP2A3-215ENST00000576957 PIGBQ92521 554 aa18.18■□□□□ 0.5
ATP2A3-215ENST00000576957 C4BP0C0L5 1744 aa18.16■□□□□ 0.5
ATP2A3-215ENST00000576957 GRIN3BO60391 1043 aa18.16■□□□□ 0.5
ATP2A3-215ENST00000576957 IFNL2Q8IZJ0 200 aa18.16■□□□□ 0.5
ATP2A3-215ENST00000576957 AK7Q96M32 723 aa18.16■□□□□ 0.5
ATP2A3-215ENST00000576957 MSL1Q68DK7 614 aa18.15■□□□□ 0.5
ATP2A3-215ENST00000576957 CD2APQ9Y5K6 639 aa18.15■□□□□ 0.5
ATP2A3-215ENST00000576957 GOLGB1Q14789 3259 aaKnown RBP18.14■□□□□ 0.49
ATP2A3-215ENST00000576957 PHKG2P15735 406 aa18.14■□□□□ 0.49
ATP2A3-215ENST00000576957 EIF4G2P78344 907 aaKnown RBP eCLIP18.14■□□□□ 0.491e-9■■■■■ 44.2
ATP2A3-215ENST00000576957 POLR3GLQ9BT43 218 aa18.14■□□□□ 0.49
ATP2A3-215ENST00000576957 TMOD3Q9NYL9 352 aa18.14■□□□□ 0.49
ATP2A3-215ENST00000576957 LOC102724428A0A0B4J2F2 783 aa18.13■□□□□ 0.49
ATP2A3-215ENST00000576957 SSFA2P28290 1259 aa18.13■□□□□ 0.49
ATP2A3-215ENST00000576957 SIK1P57059 783 aa18.13■□□□□ 0.49
ATP2A3-215ENST00000576957 EIF4A2Q14240 407 aaKnown RBP18.13■□□□□ 0.49
ATP2A3-215ENST00000576957 MIER1Q8N108 512 aa18.13■□□□□ 0.49
ATP2A3-215ENST00000576957 UBR3Q6ZT12 1888 aa18.12■□□□□ 0.49
ATP2A3-215ENST00000576957 YBX3P16989 372 aaKnown RBP eCLIP18.11■□□□□ 0.49
ATP2A3-215ENST00000576957 TNNT2P45379 298 aaPredicted RBP18.11■□□□□ 0.49
ATP2A3-215ENST00000576957 C1QTNF8P60827 252 aa18.11■□□□□ 0.49
ATP2A3-215ENST00000576957 IGSF1Q8N6C5 1336 aa18.1■□□□□ 0.49
ATP2A3-215ENST00000576957 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.1■□□□□ 0.49
ATP2A3-215ENST00000576957 PANK3Q9H999 370 aa18.1■□□□□ 0.49
ATP2A3-215ENST00000576957 ASAP1Q9ULH1 1129 aa18.1■□□□□ 0.49
ATP2A3-215ENST00000576957 HSPA5P11021 654 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms