RNA–Protein interactions for RNA: ENST00000575547.1

POLR2A-204, Transcript of RNA polymerase II subunit A, humanhuman

TSL 3

Gene POLR2A, Length 702 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-204ENST00000575547 FHDC1Q9C0D6 1143 aaPredicted RBP9.1□□□□□ -0.95
POLR2A-204ENST00000575547 RGPD3A6NKT7 1758 aaPredicted RBP9.09□□□□□ -0.95
POLR2A-204ENST00000575547 RGPD4Q7Z3J3 1758 aa9.09□□□□□ -0.95
POLR2A-204ENST00000575547 CGNL1Q0VF96 1302 aa9.09□□□□□ -0.95
POLR2A-204ENST00000575547 SMG6Q86US8 1419 aaKnown RBP9.09□□□□□ -0.95
POLR2A-204ENST00000575547 POLD1P28340 1107 aa9.09□□□□□ -0.95
POLR2A-204ENST00000575547 ZNF827Q17R98 1081 aa9.09□□□□□ -0.95
POLR2A-204ENST00000575547 KLHL34Q8N239 644 aa9.09□□□□□ -0.95
POLR2A-204ENST00000575547 USP54Q70EL1 1684 aa9.08□□□□□ -0.96
POLR2A-204ENST00000575547 HMGB2P26583 209 aaKnown RBP9.08□□□□□ -0.96
POLR2A-204ENST00000575547 SLC16A10Q8TF71 515 aa9.08□□□□□ -0.96
POLR2A-204ENST00000575547 AKT1S1Q96B36 256 aa9.08□□□□□ -0.96
POLR2A-204ENST00000575547 CARD14Q9BXL6 1004 aa9.08□□□□□ -0.96
POLR2A-204ENST00000575547 CCNL1Q9UK58 526 aaPredicted RBP9.08□□□□□ -0.96
POLR2A-204ENST00000575547 GPR162Q16538 588 aa9.07□□□□□ -0.96
POLR2A-204ENST00000575547 MPRIPQ6WCQ1 1025 aa9.07□□□□□ -0.96
POLR2A-204ENST00000575547 RTL1A6NKG5 1358 aa9.07□□□□□ -0.96
POLR2A-204ENST00000575547 NHSQ6T4R5 1651 aa9.07□□□□□ -0.96
POLR2A-204ENST00000575547 SGIP1Q9BQI5 828 aa9.06□□□□□ -0.96
POLR2A-204ENST00000575547 EMILIN1Q9Y6C2 1016 aa9.06□□□□□ -0.96
POLR2A-204ENST00000575547 INSRP06213 1382 aa9.06□□□□□ -0.96
POLR2A-204ENST00000575547 FLT4P35916 1363 aa9.06□□□□□ -0.96
POLR2A-204ENST00000575547 CASZ1Q86V15 1759 aa9.06□□□□□ -0.96
POLR2A-204ENST00000575547 BTAF1O14981 1849 aa9.05□□□□□ -0.96
POLR2A-204ENST00000575547 TNNT2P45379 298 aaPredicted RBP9.05□□□□□ -0.96
POLR2A-204ENST00000575547 PELP1Q8IZL8 1130 aaKnown RBP9.05□□□□□ -0.96
POLR2A-204ENST00000575547 SPG7Q9UQ90 795 aa9.05□□□□□ -0.96
POLR2A-204ENST00000575547 NSD3Q9BZ95 1437 aa9.05□□□□□ -0.96
POLR2A-204ENST00000575547 PNPLA7Q6ZV29 1317 aa9.05□□□□□ -0.96
POLR2A-204ENST00000575547 PCDH11XQ9BZA7 1347 aa9.05□□□□□ -0.96
POLR2A-204ENST00000575547 PCDH11YQ9BZA8 1340 aa9.05□□□□□ -0.96
POLR2A-204ENST00000575547 CLSPNQ9HAW4 1339 aa9.05□□□□□ -0.96
POLR2A-204ENST00000575547 EIF4G2P78344 907 aaKnown RBP eCLIP9.04□□□□□ -0.96
POLR2A-204ENST00000575547 SMARCC1Q92922 1105 aaPredicted RBP9.04□□□□□ -0.96
POLR2A-204ENST00000575547 MEGF6O75095 1541 aa9.04□□□□□ -0.96
POLR2A-204ENST00000575547 FAM208AQ9UK61 1670 aaKnown RBP9.04□□□□□ -0.96
POLR2A-204ENST00000575547 KIF24Q5T7B8 1368 aa9.03□□□□□ -0.96
POLR2A-204ENST00000575547 CYP27B1O15528 508 aa9.03□□□□□ -0.96
POLR2A-204ENST00000575547 COL23A1Q86Y22 540 aaPredicted RBP9.03□□□□□ -0.96
POLR2A-204ENST00000575547 CCER1Q8TC90 406 aaPredicted RBP9.03□□□□□ -0.96
POLR2A-204ENST00000575547 RGPD2P0DJD1 1756 aa9.03□□□□□ -0.96
POLR2A-204ENST00000575547 WASHC2AQ641Q2 1341 aa9.03□□□□□ -0.96
POLR2A-204ENST00000575547 MYOM1P52179 1685 aa9.02□□□□□ -0.97
POLR2A-204ENST00000575547 FLAD1Q8NFF5 587 aa9.02□□□□□ -0.97
POLR2A-204ENST00000575547 EYA1Q99502 592 aa9.02□□□□□ -0.97
POLR2A-204ENST00000575547 PANK3Q9H999 370 aa9.02□□□□□ -0.97
POLR2A-204ENST00000575547 POLKQ9UBT6 870 aa9.02□□□□□ -0.97
POLR2A-204ENST00000575547 NSD2O96028 1365 aa9.01□□□□□ -0.97
POLR2A-204ENST00000575547 HSPA5P11021 654 aaKnown RBP9.01□□□□□ -0.97
POLR2A-204ENST00000575547 MSL1Q68DK7 614 aa9.01□□□□□ -0.97
POLR2A-204ENST00000575547 IFNL2Q8IZJ0 200 aa9.01□□□□□ -0.97
POLR2A-204ENST00000575547 ZNF784Q8NCA9 323 aaPredicted RBP9.01□□□□□ -0.97
POLR2A-204ENST00000575547 PIGBQ92521 554 aa9.01□□□□□ -0.97
POLR2A-204ENST00000575547 AK7Q96M32 723 aa9.01□□□□□ -0.97
POLR2A-204ENST00000575547 TMOD3Q9NYL9 352 aa9.01□□□□□ -0.97
POLR2A-204ENST00000575547 PALLDQ8WX93 1383 aa9□□□□□ -0.97
POLR2A-204ENST00000575547 NKX1-1Q15270 411 aaPredicted RBP9□□□□□ -0.97
POLR2A-204ENST00000575547 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9□□□□□ -0.979e-10■□□□□ 10.8
POLR2A-204ENST00000575547 MAP3K5Q99683 1374 aa8.99□□□□□ -0.97
POLR2A-204ENST00000575547 KIF20BQ96Q89 1820 aa8.99□□□□□ -0.97
POLR2A-204ENST00000575547 PHF14O94880 888 aa8.99□□□□□ -0.97
POLR2A-204ENST00000575547 EIF4A2Q14240 407 aaKnown RBP8.99□□□□□ -0.97
POLR2A-204ENST00000575547 MORC1Q86VD1 984 aa8.99□□□□□ -0.97
POLR2A-204ENST00000575547 NLGN2Q8NFZ4 835 aa8.99□□□□□ -0.97
POLR2A-204ENST00000575547 DOT1LQ8TEK3 1739 aa8.99□□□□□ -0.97
POLR2A-204ENST00000575547 PAPPAQ13219 1627 aa8.98□□□□□ -0.97
POLR2A-204ENST00000575547 LOC102724428A0A0B4J2F2 783 aa8.98□□□□□ -0.97
POLR2A-204ENST00000575547 GRIN3BO60391 1043 aa8.98□□□□□ -0.97
POLR2A-204ENST00000575547 PHKG2P15735 406 aa8.98□□□□□ -0.97
POLR2A-204ENST00000575547 ATP6V1AP38606 617 aa8.98□□□□□ -0.97
POLR2A-204ENST00000575547 SIK1P57059 783 aa8.98□□□□□ -0.97
POLR2A-204ENST00000575547 PLEKHO1Q53GL0 409 aaPredicted RBP8.98□□□□□ -0.97
POLR2A-204ENST00000575547 ASAP1Q9ULH1 1129 aa8.98□□□□□ -0.97
POLR2A-204ENST00000575547 KNSTRNQ9Y448 316 aa8.98□□□□□ -0.97
POLR2A-204ENST00000575547 MAP2P11137 1827 aaKnown RBP8.97□□□□□ -0.97
POLR2A-204ENST00000575547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.97□□□□□ -0.97
POLR2A-204ENST00000575547 HSP90AB1P08238 724 aaKnown RBP8.97□□□□□ -0.97
POLR2A-204ENST00000575547 SMIM5Q71RC9 77 aa8.97□□□□□ -0.97
POLR2A-204ENST00000575547 RBM42Q9BTD8 480 aaKnown RBP8.97□□□□□ -0.97
POLR2A-204ENST00000575547 CD2APQ9Y5K6 639 aa8.97□□□□□ -0.97
POLR2A-204ENST00000575547 LINC00116Q8NCU8 138 aa8.96□□□□□ -0.98
POLR2A-204ENST00000575547 ATG3Q9NT62 314 aa8.96□□□□□ -0.98
POLR2A-204ENST00000575547 LY75O60449 1722 aa8.96□□□□□ -0.98
POLR2A-204ENST00000575547 SHANK3Q9BYB0 1731 aa8.96□□□□□ -0.98
POLR2A-204ENST00000575547 ERVV-2B6SEH9 535 aa8.95□□□□□ -0.98
POLR2A-204ENST00000575547 GNPATO15228 680 aa8.95□□□□□ -0.98
POLR2A-204ENST00000575547 SSFA2P28290 1259 aa8.95□□□□□ -0.98
POLR2A-204ENST00000575547 MTHFSP49914 203 aa8.95□□□□□ -0.98
POLR2A-204ENST00000575547 CABP4P57796 275 aa8.95□□□□□ -0.98
POLR2A-204ENST00000575547 AMOTQ4VCS5 1084 aa8.95□□□□□ -0.98
POLR2A-204ENST00000575547 C1orf141Q5JVX7 400 aa8.95□□□□□ -0.98
POLR2A-204ENST00000575547 TRAPPC3LQ5T215 181 aa8.95□□□□□ -0.98
POLR2A-204ENST00000575547 ZNF530Q6P9A1 599 aaPredicted RBP8.95□□□□□ -0.98
POLR2A-204ENST00000575547 QSER1Q2KHR3 1735 aa8.94□□□□□ -0.98
POLR2A-204ENST00000575547 CHD4Q14839 1912 aa8.94□□□□□ -0.98
POLR2A-204ENST00000575547 YBX3P16989 372 aaKnown RBP eCLIP8.94□□□□□ -0.98
POLR2A-204ENST00000575547 ITPK1Q13572 414 aa8.94□□□□□ -0.98
POLR2A-204ENST00000575547 SULT6B1Q6IMI4 303 aa8.94□□□□□ -0.98
POLR2A-204ENST00000575547 DCAF5Q96JK2 942 aa8.94□□□□□ -0.98
POLR2A-204ENST00000575547 RTCBQ9Y3I0 505 aaKnown RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms