RNA–Protein interactions for RNA: ENST00000573603.1

POLR2A-202, Transcript of RNA polymerase II subunit A, humanhuman

TSL 2

Gene POLR2A, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-202ENST00000573603 FHDC1Q9C0D6 1143 aaPredicted RBP17.31■□□□□ 0.36
POLR2A-202ENST00000573603 LY75O60449 1722 aa17.3■□□□□ 0.36
POLR2A-202ENST00000573603 FYB1O15117 783 aa17.3■□□□□ 0.36
POLR2A-202ENST00000573603 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
POLR2A-202ENST00000573603 KCNQ4P56696 695 aa17.29■□□□□ 0.36
POLR2A-202ENST00000573603 ZCRB1Q8TBF4 217 aaKnown RBP17.29■□□□□ 0.36
POLR2A-202ENST00000573603 NSD2O96028 1365 aa17.28■□□□□ 0.36
POLR2A-202ENST00000573603 NBPF6Q5VWK0 638 aa17.28■□□□□ 0.36
POLR2A-202ENST00000573603 NBPF4Q96M43 638 aa17.28■□□□□ 0.36
POLR2A-202ENST00000573603 SGIP1Q9BQI5 828 aa17.28■□□□□ 0.36
POLR2A-202ENST00000573603 SLC27A3Q5K4L6 730 aa17.27■□□□□ 0.36
POLR2A-202ENST00000573603 NSD3Q9BZ95 1437 aa17.27■□□□□ 0.35
POLR2A-202ENST00000573603 CDCA8Q53HL2 280 aa17.26■□□□□ 0.35
POLR2A-202ENST00000573603 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
POLR2A-202ENST00000573603 ARXQ96QS3 562 aa17.26■□□□□ 0.35
POLR2A-202ENST00000573603 SYT17Q9BSW7 474 aa17.26■□□□□ 0.35
POLR2A-202ENST00000573603 HSP90AB2PQ58FF8 381 aa17.25■□□□□ 0.35
POLR2A-202ENST00000573603 RAPGEF4Q8WZA2 1011 aa17.25■□□□□ 0.35
POLR2A-202ENST00000573603 FLT4P35916 1363 aa17.25■□□□□ 0.35
POLR2A-202ENST00000573603 KLHL34Q8N239 644 aa17.24■□□□□ 0.35
POLR2A-202ENST00000573603 INSRP06213 1382 aa17.24■□□□□ 0.35
POLR2A-202ENST00000573603 PNPLA7Q6ZV29 1317 aa17.23■□□□□ 0.35
POLR2A-202ENST00000573603 TATP17735 454 aaPredicted RBP17.23■□□□□ 0.35
POLR2A-202ENST00000573603 TFCP2L1Q9NZI6 479 aa17.23■□□□□ 0.35
POLR2A-202ENST00000573603 COL24A1Q17RW2 1714 aa17.22■□□□□ 0.35
POLR2A-202ENST00000573603 ANKRD26Q9UPS8 1709 aa17.22■□□□□ 0.35
POLR2A-202ENST00000573603 TOGARAM1Q9Y4F4 1720 aa17.22■□□□□ 0.35
POLR2A-202ENST00000573603 CARD14Q9BXL6 1004 aa17.22■□□□□ 0.35
POLR2A-202ENST00000573603 CCNL1Q9UK58 526 aaPredicted RBP17.22■□□□□ 0.35
POLR2A-202ENST00000573603 C5P01031 1676 aa17.22■□□□□ 0.35
POLR2A-202ENST00000573603 CGNL1Q0VF96 1302 aa17.21■□□□□ 0.35
POLR2A-202ENST00000573603 PKD1L3Q7Z443 1732 aa17.21■□□□□ 0.35
POLR2A-202ENST00000573603 EMILIN1Q9Y6C2 1016 aa17.21■□□□□ 0.35
POLR2A-202ENST00000573603 PCDH11XQ9BZA7 1347 aa17.21■□□□□ 0.34
POLR2A-202ENST00000573603 PCDH11YQ9BZA8 1340 aa17.21■□□□□ 0.34
POLR2A-202ENST00000573603 KIF24Q5T7B8 1368 aa17.2■□□□□ 0.34
POLR2A-202ENST00000573603 MAP3K5Q99683 1374 aa17.2■□□□□ 0.34
POLR2A-202ENST00000573603 CHD4Q14839 1912 aa17.19■□□□□ 0.34
POLR2A-202ENST00000573603 PPM1GO15355 546 aaPredicted RBP17.19■□□□□ 0.34
POLR2A-202ENST00000573603 POLD1P28340 1107 aa17.19■□□□□ 0.34
POLR2A-202ENST00000573603 SLC16A10Q8TF71 515 aa17.19■□□□□ 0.34
POLR2A-202ENST00000573603 POLR3GLQ9BT43 218 aa17.19■□□□□ 0.34
POLR2A-202ENST00000573603 ITGB4P16144 1822 aa17.19■□□□□ 0.34
POLR2A-202ENST00000573603 MSH5O43196 834 aa17.18■□□□□ 0.34
POLR2A-202ENST00000573603 TAF1LQ8IZX4 1826 aa17.18■□□□□ 0.34
POLR2A-202ENST00000573603 MAP2P11137 1827 aaKnown RBP17.17■□□□□ 0.34
POLR2A-202ENST00000573603 PCGF6Q9BYE7 350 aa17.17■□□□□ 0.34
POLR2A-202ENST00000573603 PALLDQ8WX93 1383 aa17.16■□□□□ 0.34
POLR2A-202ENST00000573603 CYP27B1O15528 508 aa17.15■□□□□ 0.34
POLR2A-202ENST00000573603 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
POLR2A-202ENST00000573603 PELP1Q8IZL8 1130 aaKnown RBP17.15■□□□□ 0.34
POLR2A-202ENST00000573603 NCAPD2Q15021 1401 aa17.14■□□□□ 0.33
POLR2A-202ENST00000573603 GPR162Q16538 588 aa17.14■□□□□ 0.33
POLR2A-202ENST00000573603 MSL1Q68DK7 614 aa17.14■□□□□ 0.33
POLR2A-202ENST00000573603 ZNF784Q8NCA9 323 aaPredicted RBP17.14■□□□□ 0.33
POLR2A-202ENST00000573603 UTRNP46939 3433 aa17.14■□□□□ 0.33
POLR2A-202ENST00000573603 C4BP0C0L5 1744 aa17.13■□□□□ 0.33
POLR2A-202ENST00000573603 COL23A1Q86Y22 540 aaPredicted RBP17.13■□□□□ 0.33
POLR2A-202ENST00000573603 TIMELESSQ9UNS1 1208 aa17.13■□□□□ 0.33
POLR2A-202ENST00000573603 NLGN2Q8NFZ4 835 aa17.12■□□□□ 0.33
POLR2A-202ENST00000573603 TNNT2P45379 298 aaPredicted RBP17.11■□□□□ 0.33
POLR2A-202ENST00000573603 EYA1Q99502 592 aa17.1■□□□□ 0.33
POLR2A-202ENST00000573603 WASHC2AQ641Q2 1341 aa17.1■□□□□ 0.33
POLR2A-202ENST00000573603 CLSPNQ9HAW4 1339 aa17.1■□□□□ 0.33
POLR2A-202ENST00000573603 SPG7Q9UQ90 795 aa17.09■□□□□ 0.33
POLR2A-202ENST00000573603 UBR3Q6ZT12 1888 aa17.09■□□□□ 0.33
POLR2A-202ENST00000573603 SMARCC1Q92922 1105 aaPredicted RBP17.08■□□□□ 0.32
POLR2A-202ENST00000573603 POLKQ9UBT6 870 aa17.08■□□□□ 0.32
POLR2A-202ENST00000573603 PIGBQ92521 554 aa17.07■□□□□ 0.32
POLR2A-202ENST00000573603 AK7Q96M32 723 aa17.07■□□□□ 0.32
POLR2A-202ENST00000573603 PHF14O94880 888 aa17.06■□□□□ 0.32
POLR2A-202ENST00000573603 EIF4A2Q14240 407 aaKnown RBP17.06■□□□□ 0.32
POLR2A-202ENST00000573603 HSPA5P11021 654 aaKnown RBP17.05■□□□□ 0.32
POLR2A-202ENST00000573603 NKX1-1Q15270 411 aaPredicted RBP17.05■□□□□ 0.32
POLR2A-202ENST00000573603 SMIM5Q71RC9 77 aa17.05■□□□□ 0.32
POLR2A-202ENST00000573603 AMIGO3Q86WK7 504 aa17.05■□□□□ 0.32
POLR2A-202ENST00000573603 TMOD3Q9NYL9 352 aa17.05■□□□□ 0.32
POLR2A-202ENST00000573603 PHKG2P15735 406 aa17.04■□□□□ 0.32
POLR2A-202ENST00000573603 EIF4G2P78344 907 aaKnown RBP eCLIP17.04■□□□□ 0.32
POLR2A-202ENST00000573603 FLAD1Q8NFF5 587 aa17.04■□□□□ 0.32
POLR2A-202ENST00000573603 LOC102724428A0A0B4J2F2 783 aa17.03■□□□□ 0.32
POLR2A-202ENST00000573603 YBX3P16989 372 aaKnown RBP eCLIP17.03■□□□□ 0.32
POLR2A-202ENST00000573603 HMGB2P26583 209 aaKnown RBP17.03■□□□□ 0.32
POLR2A-202ENST00000573603 SIK1P57059 783 aa17.03■□□□□ 0.32
POLR2A-202ENST00000573603 IFNL2Q8IZJ0 200 aa17.03■□□□□ 0.32
POLR2A-202ENST00000573603 LINC00116Q8NCU8 138 aa17.02■□□□□ 0.32
POLR2A-202ENST00000573603 PANK3Q9H999 370 aa17.02■□□□□ 0.32
POLR2A-202ENST00000573603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.02■□□□□ 0.32
POLR2A-202ENST00000573603 ASAP1Q9ULH1 1129 aa17.02■□□□□ 0.32
POLR2A-202ENST00000573603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.01■□□□□ 0.31
POLR2A-202ENST00000573603 GOLGB1Q14789 3259 aaKnown RBP17.01■□□□□ 0.31
POLR2A-202ENST00000573603 IGSF1Q8N6C5 1336 aa17■□□□□ 0.31
POLR2A-202ENST00000573603 CCER1Q8TC90 406 aaPredicted RBP17■□□□□ 0.31
POLR2A-202ENST00000573603 GNPATO15228 680 aa16.99■□□□□ 0.31
POLR2A-202ENST00000573603 ITPK1Q13572 414 aa16.99■□□□□ 0.31
POLR2A-202ENST00000573603 SSFA2P28290 1259 aa16.98■□□□□ 0.31
POLR2A-202ENST00000573603 ATP6V1AP38606 617 aa16.98■□□□□ 0.31
POLR2A-202ENST00000573603 ATG3Q9NT62 314 aa16.98■□□□□ 0.31
POLR2A-202ENST00000573603 WWC3Q9ULE0 1092 aa16.98■□□□□ 0.31
POLR2A-202ENST00000573603 CD2APQ9Y5K6 639 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms