RNA–Protein interactions for RNA: ENST00000573108.1

TRIM25-207, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 952 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-207ENST00000573108 ZNF784Q8NCA9 323 aaPredicted RBP16.97■□□□□ 0.31
TRIM25-207ENST00000573108 NSD2O96028 1365 aa16.97■□□□□ 0.31
TRIM25-207ENST00000573108 CHD4Q14839 1912 aa16.97■□□□□ 0.31
TRIM25-207ENST00000573108 COL24A1Q17RW2 1714 aa16.96■□□□□ 0.31
TRIM25-207ENST00000573108 SLC27A3Q5K4L6 730 aa16.96■□□□□ 0.31
TRIM25-207ENST00000573108 ANKRD36BQ8N2N9 1353 aa16.96■□□□□ 0.31
TRIM25-207ENST00000573108 MAP3K5Q99683 1374 aa16.96■□□□□ 0.31
TRIM25-207ENST00000573108 PNPLA7Q6ZV29 1317 aa16.96■□□□□ 0.3
TRIM25-207ENST00000573108 RRS1Q15050 365 aaKnown RBP16.95■□□□□ 0.3
TRIM25-207ENST00000573108 ZCRB1Q8TBF4 217 aaKnown RBP16.95■□□□□ 0.3
TRIM25-207ENST00000573108 NBPF6Q5VWK0 638 aa16.94■□□□□ 0.3
TRIM25-207ENST00000573108 USHBP1Q8N6Y0 703 aa16.94■□□□□ 0.3
TRIM25-207ENST00000573108 NBPF4Q96M43 638 aa16.94■□□□□ 0.3
TRIM25-207ENST00000573108 RTL1A6NKG5 1358 aa16.93■□□□□ 0.3
TRIM25-207ENST00000573108 KLHL34Q8N239 644 aa16.93■□□□□ 0.3
TRIM25-207ENST00000573108 SLC16A10Q8TF71 515 aa16.93■□□□□ 0.3
TRIM25-207ENST00000573108 GGNBP2Q9H3C7 697 aa16.93■□□□□ 0.3
TRIM25-207ENST00000573108 FYB1O15117 783 aa16.92■□□□□ 0.3
TRIM25-207ENST00000573108 TFCP2L1Q9NZI6 479 aa16.92■□□□□ 0.3
TRIM25-207ENST00000573108 KIF20BQ96Q89 1820 aa16.91■□□□□ 0.3
TRIM25-207ENST00000573108 GOLGB1Q14789 3259 aaKnown RBP16.91■□□□□ 0.3
TRIM25-207ENST00000573108 POLD1P28340 1107 aa16.9■□□□□ 0.3
TRIM25-207ENST00000573108 CCNL1Q9UK58 526 aaPredicted RBP16.9■□□□□ 0.3
TRIM25-207ENST00000573108 USP47Q96K76 1375 aa16.89■□□□□ 0.3
TRIM25-207ENST00000573108 SLC24A1O60721 1099 aa16.89■□□□□ 0.29
TRIM25-207ENST00000573108 TMF1P82094 1093 aa16.89■□□□□ 0.29
TRIM25-207ENST00000573108 GPR162Q16538 588 aa16.89■□□□□ 0.29
TRIM25-207ENST00000573108 HSP90AB2PQ58FF8 381 aa16.88■□□□□ 0.29
TRIM25-207ENST00000573108 NLGN2Q8NFZ4 835 aa16.88■□□□□ 0.29
TRIM25-207ENST00000573108 SMG6Q86US8 1419 aaKnown RBP16.87■□□□□ 0.29
TRIM25-207ENST00000573108 RAPGEF4Q8WZA2 1011 aa16.87■□□□□ 0.29
TRIM25-207ENST00000573108 C5P01031 1676 aa16.87■□□□□ 0.29
TRIM25-207ENST00000573108 COL23A1Q86Y22 540 aaPredicted RBP16.86■□□□□ 0.29
TRIM25-207ENST00000573108 PELP1Q8IZL8 1130 aaKnown RBP16.86■□□□□ 0.29
TRIM25-207ENST00000573108 TOGARAM1Q9Y4F4 1720 aa16.86■□□□□ 0.29
TRIM25-207ENST00000573108 CGNL1Q0VF96 1302 aa16.86■□□□□ 0.29
TRIM25-207ENST00000573108 INSRP06213 1382 aa16.86■□□□□ 0.29
TRIM25-207ENST00000573108 MSH5O43196 834 aa16.85■□□□□ 0.29
TRIM25-207ENST00000573108 TATP17735 454 aaPredicted RBP16.85■□□□□ 0.29
TRIM25-207ENST00000573108 TAF1LQ8IZX4 1826 aa16.84■□□□□ 0.29
TRIM25-207ENST00000573108 FLT4P35916 1363 aa16.84■□□□□ 0.29
TRIM25-207ENST00000573108 ITGB4P16144 1822 aa16.83■□□□□ 0.28
TRIM25-207ENST00000573108 MSL1Q68DK7 614 aa16.83■□□□□ 0.28
TRIM25-207ENST00000573108 PCDH11XQ9BZA7 1347 aa16.83■□□□□ 0.28
TRIM25-207ENST00000573108 PCDH11YQ9BZA8 1340 aa16.83■□□□□ 0.28
TRIM25-207ENST00000573108 PKD1L3Q7Z443 1732 aa16.82■□□□□ 0.28
TRIM25-207ENST00000573108 CLSPNQ9HAW4 1339 aa16.82■□□□□ 0.28
TRIM25-207ENST00000573108 CYP27B1O15528 508 aa16.82■□□□□ 0.28
TRIM25-207ENST00000573108 CARD14Q9BXL6 1004 aa16.82■□□□□ 0.28
TRIM25-207ENST00000573108 EMILIN1Q9Y6C2 1016 aa16.82■□□□□ 0.28
TRIM25-207ENST00000573108 NSD3Q9BZ95 1437 aa16.81■□□□□ 0.28
TRIM25-207ENST00000573108 KIF24Q5T7B8 1368 aa16.81■□□□□ 0.28
TRIM25-207ENST00000573108 PALLDQ8WX93 1383 aa16.81■□□□□ 0.28
TRIM25-207ENST00000573108 MPRIPQ6WCQ1 1025 aa16.81■□□□□ 0.28
TRIM25-207ENST00000573108 CCER1Q8TC90 406 aaPredicted RBP16.81■□□□□ 0.28
TRIM25-207ENST00000573108 YBX3P16989 372 aaKnown RBP eCLIP16.8■□□□□ 0.282e-7■■□□□ 13
TRIM25-207ENST00000573108 C1QTNF8P60827 252 aa16.8■□□□□ 0.28
TRIM25-207ENST00000573108 C4BP0C0L5 1744 aa16.79■□□□□ 0.28
TRIM25-207ENST00000573108 ANKRD26Q9UPS8 1709 aa16.79■□□□□ 0.28
TRIM25-207ENST00000573108 CDCA8Q53HL2 280 aa16.79■□□□□ 0.28
TRIM25-207ENST00000573108 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
TRIM25-207ENST00000573108 AMIGO3Q86WK7 504 aa16.78■□□□□ 0.28
TRIM25-207ENST00000573108 NCAPD2Q15021 1401 aa16.78■□□□□ 0.28
TRIM25-207ENST00000573108 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.28
TRIM25-207ENST00000573108 TIMELESSQ9UNS1 1208 aa16.77■□□□□ 0.28
TRIM25-207ENST00000573108 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.27
TRIM25-207ENST00000573108 UBR3Q6ZT12 1888 aa16.76■□□□□ 0.27
TRIM25-207ENST00000573108 SMIM5Q71RC9 77 aa16.76■□□□□ 0.27
TRIM25-207ENST00000573108 PIGBQ92521 554 aa16.75■□□□□ 0.27
TRIM25-207ENST00000573108 GRIN3BO60391 1043 aa16.74■□□□□ 0.27
TRIM25-207ENST00000573108 GIGYF1O75420 1035 aaPredicted RBP16.74■□□□□ 0.27
TRIM25-207ENST00000573108 FLAD1Q8NFF5 587 aa16.74■□□□□ 0.27
TRIM25-207ENST00000573108 NKX1-1Q15270 411 aaPredicted RBP16.73■□□□□ 0.27
TRIM25-207ENST00000573108 SMARCC1Q92922 1105 aaPredicted RBP16.73■□□□□ 0.27
TRIM25-207ENST00000573108 AK7Q96M32 723 aa16.73■□□□□ 0.27
TRIM25-207ENST00000573108 EYA1Q99502 592 aa16.73■□□□□ 0.27
TRIM25-207ENST00000573108 WASHC2AQ641Q2 1341 aa16.72■□□□□ 0.27
TRIM25-207ENST00000573108 PHF14O94880 888 aa16.72■□□□□ 0.27
TRIM25-207ENST00000573108 SPG7Q9UQ90 795 aa16.72■□□□□ 0.27
TRIM25-207ENST00000573108 CD2APQ9Y5K6 639 aa16.72■□□□□ 0.27
TRIM25-207ENST00000573108 LINC00116Q8NCU8 138 aa16.71■□□□□ 0.27
TRIM25-207ENST00000573108 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.7■□□□□ 0.26
TRIM25-207ENST00000573108 POLKQ9UBT6 870 aa16.7■□□□□ 0.26
TRIM25-207ENST00000573108 CEP350Q5VT06 3117 aa16.69■□□□□ 0.26
TRIM25-207ENST00000573108 LOC102724428A0A0B4J2F2 783 aa16.69■□□□□ 0.26
TRIM25-207ENST00000573108 HMGB2P26583 209 aaKnown RBP16.69■□□□□ 0.26
TRIM25-207ENST00000573108 SIK1P57059 783 aa16.69■□□□□ 0.26
TRIM25-207ENST00000573108 TMOD3Q9NYL9 352 aa16.69■□□□□ 0.26
TRIM25-207ENST00000573108 ASAP1Q9ULH1 1129 aa16.69■□□□□ 0.26
TRIM25-207ENST00000573108 ATP10DQ9P241 1426 aa16.69■□□□□ 0.26
TRIM25-207ENST00000573108 PHKG2P15735 406 aa16.68■□□□□ 0.26
TRIM25-207ENST00000573108 ITPK1Q13572 414 aa16.68■□□□□ 0.26
TRIM25-207ENST00000573108 POLR3GLQ9BT43 218 aa16.68■□□□□ 0.26
TRIM25-207ENST00000573108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.68■□□□□ 0.26
TRIM25-207ENST00000573108 WWC3Q9ULE0 1092 aa16.68■□□□□ 0.26
TRIM25-207ENST00000573108 SSFA2P28290 1259 aa16.67■□□□□ 0.26
TRIM25-207ENST00000573108 TNNT2P45379 298 aaPredicted RBP16.67■□□□□ 0.26
TRIM25-207ENST00000573108 EIF4A2Q14240 407 aaKnown RBP16.67■□□□□ 0.26
TRIM25-207ENST00000573108 IFNL2Q8IZJ0 200 aa16.67■□□□□ 0.26
TRIM25-207ENST00000573108 IGSF1Q8N6C5 1336 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms