RNA–Protein interactions for RNA: ENST00000573095.1

HCFC1R1-204, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3

Gene HCFC1R1, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-204ENST00000573095 PCGF6Q9BYE7 350 aa26.91■■□□□ 1.9
HCFC1R1-204ENST00000573095 CGNL1Q0VF96 1302 aa26.9■■□□□ 1.9
HCFC1R1-204ENST00000573095 ZBTB7AO95365 584 aa26.9■■□□□ 1.9
HCFC1R1-204ENST00000573095 NBPF6Q5VWK0 638 aa26.9■■□□□ 1.9
HCFC1R1-204ENST00000573095 ZCRB1Q8TBF4 217 aaKnown RBP26.9■■□□□ 1.9
HCFC1R1-204ENST00000573095 NBPF4Q96M43 638 aa26.9■■□□□ 1.9
HCFC1R1-204ENST00000573095 NSD2O96028 1365 aa26.89■■□□□ 1.9
HCFC1R1-204ENST00000573095 PTGER2P43116 358 aa26.88■■□□□ 1.89
HCFC1R1-204ENST00000573095 LRRC4BQ9NT99 713 aa26.87■■□□□ 1.89
HCFC1R1-204ENST00000573095 TUBGCP6Q96RT7 1819 aa26.86■■□□□ 1.89
HCFC1R1-204ENST00000573095 HSP90AB2PQ58FF8 381 aa26.86■■□□□ 1.89
HCFC1R1-204ENST00000573095 PKD1L3Q7Z443 1732 aa26.86■■□□□ 1.89
HCFC1R1-204ENST00000573095 MTFR1LQ9H019 292 aa26.86■■□□□ 1.89
HCFC1R1-204ENST00000573095 ZNF827Q17R98 1081 aa26.85■■□□□ 1.89
HCFC1R1-204ENST00000573095 SLC27A3Q5K4L6 730 aa26.85■■□□□ 1.89
HCFC1R1-204ENST00000573095 USHBP1Q8N6Y0 703 aa26.85■■□□□ 1.89
HCFC1R1-204ENST00000573095 RAPGEF4Q8WZA2 1011 aa26.85■■□□□ 1.89
HCFC1R1-204ENST00000573095 MAP2P11137 1827 aaKnown RBP26.83■■□□□ 1.89
HCFC1R1-204ENST00000573095 NCAPD2Q15021 1401 aa26.83■■□□□ 1.89
HCFC1R1-204ENST00000573095 PRIM1P49642 420 aaKnown RBP26.83■■□□□ 1.89
HCFC1R1-204ENST00000573095 SYTL4Q96C24 671 aaPredicted RBP26.83■■□□□ 1.89
HCFC1R1-204ENST00000573095 ATF5Q9Y2D1 282 aaPredicted RBP26.83■■□□□ 1.89
HCFC1R1-204ENST00000573095 SGIP1Q9BQI5 828 aa26.82■■□□□ 1.88
HCFC1R1-204ENST00000573095 COL24A1Q17RW2 1714 aa26.82■■□□□ 1.88
HCFC1R1-204ENST00000573095 TATP17735 454 aaPredicted RBP26.81■■□□□ 1.88
HCFC1R1-204ENST00000573095 EMILIN1Q9Y6C2 1016 aa26.81■■□□□ 1.88
HCFC1R1-204ENST00000573095 TOGARAM1Q9Y4F4 1720 aa26.8■■□□□ 1.88
HCFC1R1-204ENST00000573095 AKT1S1Q96B36 256 aa26.8■■□□□ 1.88
HCFC1R1-204ENST00000573095 PCDH11XQ9BZA7 1347 aa26.8■■□□□ 1.88
HCFC1R1-204ENST00000573095 PCDH11YQ9BZA8 1340 aa26.8■■□□□ 1.88
HCFC1R1-204ENST00000573095 DCAF8L1A6NGE4 600 aa26.77■■□□□ 1.88
HCFC1R1-204ENST00000573095 ITGB4P16144 1822 aa26.75■■□□□ 1.87
HCFC1R1-204ENST00000573095 EIF4G2P78344 907 aaKnown RBP eCLIP26.75■■□□□ 1.87
HCFC1R1-204ENST00000573095 C5P01031 1676 aa26.75■■□□□ 1.87
HCFC1R1-204ENST00000573095 WASHC2AQ641Q2 1341 aa26.74■■□□□ 1.87
HCFC1R1-204ENST00000573095 MAP3K5Q99683 1374 aa26.73■■□□□ 1.87
HCFC1R1-204ENST00000573095 PNPLA7Q6ZV29 1317 aa26.73■■□□□ 1.87
HCFC1R1-204ENST00000573095 FHDC1Q9C0D6 1143 aaPredicted RBP26.73■■□□□ 1.87
HCFC1R1-204ENST00000573095 TAF1LQ8IZX4 1826 aa26.72■■□□□ 1.87
HCFC1R1-204ENST00000573095 SLC16A10Q8TF71 515 aa26.72■■□□□ 1.87
HCFC1R1-204ENST00000573095 POLR3GLQ9BT43 218 aa26.72■■□□□ 1.87
HCFC1R1-204ENST00000573095 PPM1GO15355 546 aaPredicted RBP26.71■■□□□ 1.87
HCFC1R1-204ENST00000573095 HSPA5P11021 654 aaKnown RBP26.71■■□□□ 1.87
HCFC1R1-204ENST00000573095 KCNQ4P56696 695 aa26.71■■□□□ 1.87
HCFC1R1-204ENST00000573095 SYT17Q9BSW7 474 aa26.71■■□□□ 1.87
HCFC1R1-204ENST00000573095 CCNL1Q9UK58 526 aaPredicted RBP26.71■■□□□ 1.87
HCFC1R1-204ENST00000573095 CYP27B1O15528 508 aa26.7■■□□□ 1.86
HCFC1R1-204ENST00000573095 YY1P25490 414 aa26.7■■□□□ 1.86
HCFC1R1-204ENST00000573095 ARXQ96QS3 562 aa26.7■■□□□ 1.86
HCFC1R1-204ENST00000573095 CCER1Q8TC90 406 aaPredicted RBP26.69■■□□□ 1.86
HCFC1R1-204ENST00000573095 POLKQ9UBT6 870 aa26.69■■□□□ 1.86
HCFC1R1-204ENST00000573095 TFCP2L1Q9NZI6 479 aa26.68■■□□□ 1.86
HCFC1R1-204ENST00000573095 PALLDQ8WX93 1383 aa26.66■■□□□ 1.86
HCFC1R1-204ENST00000573095 PLEKHG2Q9H7P9 1386 aa26.66■■□□□ 1.86
HCFC1R1-204ENST00000573095 EYA1Q99502 592 aa26.65■■□□□ 1.86
HCFC1R1-204ENST00000573095 NKX1-1Q15270 411 aaPredicted RBP26.63■■□□□ 1.85
HCFC1R1-204ENST00000573095 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.63■■□□□ 1.85
HCFC1R1-204ENST00000573095 SPG7Q9UQ90 795 aa26.63■■□□□ 1.85
HCFC1R1-204ENST00000573095 C4BP0C0L5 1744 aa26.62■■□□□ 1.85
HCFC1R1-204ENST00000573095 POLD1P28340 1107 aa26.62■■□□□ 1.85
HCFC1R1-204ENST00000573095 MPRIPQ6WCQ1 1025 aa26.62■■□□□ 1.85
HCFC1R1-204ENST00000573095 PANK3Q9H999 370 aa26.62■■□□□ 1.85
HCFC1R1-204ENST00000573095 HMGB2P26583 209 aaKnown RBP26.61■■□□□ 1.85
HCFC1R1-204ENST00000573095 CHD4Q14839 1912 aa26.61■■□□□ 1.85
HCFC1R1-204ENST00000573095 EIF4A2Q14240 407 aaKnown RBP26.6■■□□□ 1.85
HCFC1R1-204ENST00000573095 TNNT2P45379 298 aaPredicted RBP26.59■■□□□ 1.85
HCFC1R1-204ENST00000573095 SMARCC1Q92922 1105 aaPredicted RBP26.59■■□□□ 1.85
HCFC1R1-204ENST00000573095 IGSF1Q8N6C5 1336 aa26.58■■□□□ 1.85
HCFC1R1-204ENST00000573095 UBR3Q6ZT12 1888 aa26.57■■□□□ 1.84
HCFC1R1-204ENST00000573095 COL23A1Q86Y22 540 aaPredicted RBP26.56■■□□□ 1.84
HCFC1R1-204ENST00000573095 PIGBQ92521 554 aa26.55■■□□□ 1.84
HCFC1R1-204ENST00000573095 PHKG2P15735 406 aa26.54■■□□□ 1.84
HCFC1R1-204ENST00000573095 IFNL2Q8IZJ0 200 aa26.54■■□□□ 1.84
HCFC1R1-204ENST00000573095 FLAD1Q8NFF5 587 aa26.52■■□□□ 1.84
HCFC1R1-204ENST00000573095 MSH5O43196 834 aa26.51■■□□□ 1.83
HCFC1R1-204ENST00000573095 KLHL34Q8N239 644 aa26.51■■□□□ 1.83
HCFC1R1-204ENST00000573095 TMOD3Q9NYL9 352 aa26.51■■□□□ 1.83
HCFC1R1-204ENST00000573095 ZNF831Q5JPB2 1677 aa26.5■■□□□ 1.83
HCFC1R1-204ENST00000573095 UTRNP46939 3433 aa26.49■■□□□ 1.83
HCFC1R1-204ENST00000573095 MORC1Q86VD1 984 aa26.48■■□□□ 1.83
HCFC1R1-204ENST00000573095 AK7Q96M32 723 aa26.48■■□□□ 1.83
HCFC1R1-204ENST00000573095 LOC102724428A0A0B4J2F2 783 aa26.47■■□□□ 1.83
HCFC1R1-204ENST00000573095 SIK1P57059 783 aa26.47■■□□□ 1.83
HCFC1R1-204ENST00000573095 KNSTRNQ9Y448 316 aa26.47■■□□□ 1.83
HCFC1R1-204ENST00000573095 KIF7Q2M1P5 1343 aa26.45■■□□□ 1.83
HCFC1R1-204ENST00000573095 MSL1Q68DK7 614 aa26.45■■□□□ 1.82
HCFC1R1-204ENST00000573095 NLGN2Q8NFZ4 835 aa26.45■■□□□ 1.82
HCFC1R1-204ENST00000573095 KDRP35968 1356 aa26.45■■□□□ 1.82
HCFC1R1-204ENST00000573095 GPR162Q16538 588 aa26.44■■□□□ 1.82
HCFC1R1-204ENST00000573095 AMIGO3Q86WK7 504 aa26.44■■□□□ 1.82
HCFC1R1-204ENST00000573095 ASAP1Q9ULH1 1129 aa26.44■■□□□ 1.82
HCFC1R1-204ENST00000573095 COL5A3P25940 1745 aaPredicted RBP26.43■■□□□ 1.82
HCFC1R1-204ENST00000573095 KDM6AO15550 1401 aaPredicted RBP26.43■■□□□ 1.82
HCFC1R1-204ENST00000573095 HSP90AB1P08238 724 aaKnown RBP26.43■■□□□ 1.82
HCFC1R1-204ENST00000573095 LINC00116Q8NCU8 138 aa26.43■■□□□ 1.82
HCFC1R1-204ENST00000573095 SSFA2P28290 1259 aa26.42■■□□□ 1.82
HCFC1R1-204ENST00000573095 PLEKHO1Q53GL0 409 aaPredicted RBP26.42■■□□□ 1.82
HCFC1R1-204ENST00000573095 AMER1Q5JTC6 1135 aaPredicted RBP26.42■■□□□ 1.82
HCFC1R1-204ENST00000573095 ATG3Q9NT62 314 aa26.42■■□□□ 1.82
HCFC1R1-204ENST00000573095 ERVV-2B6SEH9 535 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms