RNA–Protein interactions for RNA: ENST00000572824.1

NPLOC4-210, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-210ENST00000572824 BLMP54132 1417 aaPredicted RBP13.4□□□□□ -0.26
NPLOC4-210ENST00000572824 ARHGEF1Q92888 912 aaKnown RBP13.4□□□□□ -0.26
NPLOC4-210ENST00000572824 L3MBTL2Q969R5 705 aa13.4□□□□□ -0.26
NPLOC4-210ENST00000572824 CAMTA1Q9Y6Y1 1673 aa13.4□□□□□ -0.26
NPLOC4-210ENST00000572824 PPIP5K1Q6PFW1 1433 aa13.39□□□□□ -0.27
NPLOC4-210ENST00000572824 RGPD1P0DJD0 1748 aa13.39□□□□□ -0.27
NPLOC4-210ENST00000572824 A0A0G2JS52 829 aa13.39□□□□□ -0.27
NPLOC4-210ENST00000572824 ZC3H6P61129 1189 aaKnown RBP13.39□□□□□ -0.27
NPLOC4-210ENST00000572824 MYT1Q01538 1121 aa13.39□□□□□ -0.27
NPLOC4-210ENST00000572824 RGPD5Q99666 1765 aa13.39□□□□□ -0.27
NPLOC4-210ENST00000572824 AKAP12Q02952 1782 aa13.38□□□□□ -0.27
NPLOC4-210ENST00000572824 KRT27Q7Z3Y8 459 aa13.38□□□□□ -0.27
NPLOC4-210ENST00000572824 PRDM11Q9NQV5 511 aa13.38□□□□□ -0.27
NPLOC4-210ENST00000572824 SPATA31A5Q5VU36 1347 aa13.38□□□□□ -0.27
NPLOC4-210ENST00000572824 SPATA31A7Q8IWB4 1347 aa13.38□□□□□ -0.27
NPLOC4-210ENST00000572824 POTEB2H3BUK9 544 aa13.37□□□□□ -0.27
NPLOC4-210ENST00000572824 ONECUT3O60422 494 aaPredicted RBP13.37□□□□□ -0.27
NPLOC4-210ENST00000572824 PLPP6Q8IY26 295 aa13.37□□□□□ -0.27
NPLOC4-210ENST00000572824 STRN4Q9NRL3 753 aa13.37□□□□□ -0.27
NPLOC4-210ENST00000572824 CENPJQ9HC77 1338 aaPredicted RBP13.37□□□□□ -0.27
NPLOC4-210ENST00000572824 NEUROD1Q13562 356 aa13.36□□□□□ -0.27
NPLOC4-210ENST00000572824 NBPF8Q3BBV2 869 aa13.36□□□□□ -0.27
NPLOC4-210ENST00000572824 WNK3Q9BYP7 1800 aa13.36□□□□□ -0.27
NPLOC4-210ENST00000572824 COL18A1P39060 1754 aa13.35□□□□□ -0.27
NPLOC4-210ENST00000572824 POTEJP0CG39 1038 aa13.35□□□□□ -0.27
NPLOC4-210ENST00000572824 ARIH1Q9Y4X5 557 aaPredicted RBP13.35□□□□□ -0.27
NPLOC4-210ENST00000572824 USP19O94966 1318 aa13.35□□□□□ -0.27
NPLOC4-210ENST00000572824 SSH2Q76I76 1423 aa13.34□□□□□ -0.27
NPLOC4-210ENST00000572824 PLEKHG3A1L390 1219 aa13.34□□□□□ -0.27
NPLOC4-210ENST00000572824 SRPK2P78362 688 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-210ENST00000572824 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-210ENST00000572824 USP35Q9P2H5 1018 aa13.34□□□□□ -0.27
NPLOC4-210ENST00000572824 SLIT3O75094 1523 aa13.34□□□□□ -0.27
NPLOC4-210ENST00000572824 USP6P35125 1406 aa13.33□□□□□ -0.28
NPLOC4-210ENST00000572824 PSDA5PKW4 1024 aaPredicted RBP13.33□□□□□ -0.28
NPLOC4-210ENST00000572824 STAC3Q96MF2 364 aa13.33□□□□□ -0.28
NPLOC4-210ENST00000572824 SPATA31A1Q5TZJ5 1347 aa13.33□□□□□ -0.28
NPLOC4-210ENST00000572824 LRRC37A3O60309 1634 aa13.32□□□□□ -0.28
NPLOC4-210ENST00000572824 LARP1Q6PKG0 1096 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-210ENST00000572824 EMILIN3Q9NT22 766 aa13.32□□□□□ -0.28
NPLOC4-210ENST00000572824 MON2Q7Z3U7 1717 aa13.32□□□□□ -0.28
NPLOC4-210ENST00000572824 COL5A2P05997 1499 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-210ENST00000572824 NUP188Q5SRE5 1749 aa13.31□□□□□ -0.28
NPLOC4-210ENST00000572824 PARP4Q9UKK3 1724 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-210ENST00000572824 ZBTB7CA1YPR0 619 aa13.31□□□□□ -0.28
NPLOC4-210ENST00000572824 ABTB2Q8N961 1025 aa13.31□□□□□ -0.28
NPLOC4-210ENST00000572824 CABP1Q9NZU7 370 aa13.31□□□□□ -0.28
NPLOC4-210ENST00000572824 RREB1Q92766 1687 aa13.31□□□□□ -0.28
NPLOC4-210ENST00000572824 EN1Q05925 392 aaPredicted RBP13.3□□□□□ -0.28
NPLOC4-210ENST00000572824 ROCK2O75116 1388 aaKnown RBP13.3□□□□□ -0.28
NPLOC4-210ENST00000572824 PEAK1Q9H792 1746 aa13.3□□□□□ -0.28
NPLOC4-210ENST00000572824 SBF2Q86WG5 1849 aa13.29□□□□□ -0.28
NPLOC4-210ENST00000572824 LRP5O75197 1615 aa13.29□□□□□ -0.28
NPLOC4-210ENST00000572824 CCDC125Q86Z20 511 aa13.29□□□□□ -0.28
NPLOC4-210ENST00000572824 CPDO75976 1380 aa13.28□□□□□ -0.28
NPLOC4-210ENST00000572824 CD163L1Q9NR16 1453 aa13.27□□□□□ -0.29
NPLOC4-210ENST00000572824 NFAT5O94916 1531 aa13.27□□□□□ -0.29
NPLOC4-210ENST00000572824 LTN1O94822 1766 aa13.27□□□□□ -0.29
NPLOC4-210ENST00000572824 TRIM37O94972 964 aa13.26□□□□□ -0.29
NPLOC4-210ENST00000572824 GCP02774 474 aa13.26□□□□□ -0.29
NPLOC4-210ENST00000572824 SF3B2Q13435 895 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-210ENST00000572824 EZH2Q15910 746 aaKnown RBP13.26□□□□□ -0.29
NPLOC4-210ENST00000572824 DISP2A7MBM2 1401 aa13.24□□□□□ -0.29
NPLOC4-210ENST00000572824 PTF1AQ7RTS3 328 aa13.24□□□□□ -0.29
NPLOC4-210ENST00000572824 AXIN2Q9Y2T1 843 aa13.24□□□□□ -0.29
NPLOC4-210ENST00000572824 USP54Q70EL1 1684 aa13.24□□□□□ -0.29
NPLOC4-210ENST00000572824 CPSF1Q10570 1443 aaKnown RBP13.23□□□□□ -0.29
NPLOC4-210ENST00000572824 DPYSL4O14531 572 aa13.23□□□□□ -0.29
NPLOC4-210ENST00000572824 BAG6P46379 1132 aa13.23□□□□□ -0.29
NPLOC4-210ENST00000572824 CRB1P82279 1406 aa13.22□□□□□ -0.29
NPLOC4-210ENST00000572824 TTC21BQ7Z4L5 1316 aa13.22□□□□□ -0.29
NPLOC4-210ENST00000572824 EVC2Q86UK5 1308 aa13.22□□□□□ -0.29
NPLOC4-210ENST00000572824 SEMA3EO15041 775 aa13.22□□□□□ -0.29
NPLOC4-210ENST00000572824 EVA1CP58658 441 aa13.22□□□□□ -0.29
NPLOC4-210ENST00000572824 R3HDM1Q15032 1099 aaKnown RBP13.22□□□□□ -0.29
NPLOC4-210ENST00000572824 NLRP13Q86W25 1043 aa13.22□□□□□ -0.29
NPLOC4-210ENST00000572824 MAMSTRQ6ZN01 415 aa13.21□□□□□ -0.29
NPLOC4-210ENST00000572824 BARGINQ6ZT62 677 aa13.21□□□□□ -0.29
NPLOC4-210ENST00000572824 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
NPLOC4-210ENST00000572824 CAMKK2Q96RR4 588 aa13.21□□□□□ -0.29
NPLOC4-210ENST00000572824 OXER1Q8TDS5 423 aa13.2□□□□□ -0.3
NPLOC4-210ENST00000572824 SCUBE2Q9NQ36 999 aa13.2□□□□□ -0.3
NPLOC4-210ENST00000572824 RGPD2P0DJD1 1756 aa13.2□□□□□ -0.3
NPLOC4-210ENST00000572824 AATKQ6ZMQ8 1374 aa13.2□□□□□ -0.3
NPLOC4-210ENST00000572824 TESPA1A2RU30 521 aaPredicted RBP13.19□□□□□ -0.3
NPLOC4-210ENST00000572824 NME9Q86XW9 330 aa13.19□□□□□ -0.3
NPLOC4-210ENST00000572824 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.19□□□□□ -0.3
NPLOC4-210ENST00000572824 KTN1Q86UP2 1357 aaKnown RBP13.19□□□□□ -0.3
NPLOC4-210ENST00000572824 SBNO2Q9Y2G9 1366 aa13.19□□□□□ -0.3
NPLOC4-210ENST00000572824 APBA3O96018 575 aa13.18□□□□□ -0.3
NPLOC4-210ENST00000572824 SPDYE16A6NNV3 312 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-210ENST00000572824 SLC34A2O95436 690 aa13.17□□□□□ -0.3
NPLOC4-210ENST00000572824 MAP3K9P80192 1104 aa13.17□□□□□ -0.3
NPLOC4-210ENST00000572824 PDIA6Q15084 440 aa13.17□□□□□ -0.3
NPLOC4-210ENST00000572824 FAM196AQ6ZSG2 479 aa13.17□□□□□ -0.3
NPLOC4-210ENST00000572824 ARHGEF25Q86VW2 580 aa13.17□□□□□ -0.3
NPLOC4-210ENST00000572824 SLAIN1Q8ND83 568 aa13.17□□□□□ -0.3
NPLOC4-210ENST00000572824 CARD11Q9BXL7 1154 aa13.17□□□□□ -0.3
NPLOC4-210ENST00000572824 BRD4O60885 1362 aaPredicted RBP13.17□□□□□ -0.3
NPLOC4-210ENST00000572824 PDE3BQ13370 1112 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms