RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 MEGF6O75095 1541 aa19.35■□□□□ 0.69
NPLOC4-209ENST00000572760 LRRC37A3O60309 1634 aa19.34■□□□□ 0.69
NPLOC4-209ENST00000572760 KRT27Q7Z3Y8 459 aa19.33■□□□□ 0.68
NPLOC4-209ENST00000572760 ZCRB1Q8TBF4 217 aaKnown RBP19.33■□□□□ 0.68
NPLOC4-209ENST00000572760 KDRP35968 1356 aa19.32■□□□□ 0.68
NPLOC4-209ENST00000572760 NEFMP07197 916 aa19.32■□□□□ 0.68
NPLOC4-209ENST00000572760 CCDC184Q52MB2 194 aa19.32■□□□□ 0.68
NPLOC4-209ENST00000572760 SPG7Q9UQ90 795 aa19.32■□□□□ 0.68
NPLOC4-209ENST00000572760 PLEKHO1Q53GL0 409 aaPredicted RBP19.31■□□□□ 0.68
NPLOC4-209ENST00000572760 PNNQ9H307 717 aaKnown RBP19.31■□□□□ 0.68
NPLOC4-209ENST00000572760 OVOS2A0A0G2JMS6 1433 aa19.31■□□□□ 0.68
NPLOC4-209ENST00000572760 FCHSD2O94868 740 aa19.3■□□□□ 0.68
NPLOC4-209ENST00000572760 DDX54Q8TDD1 881 aaKnown RBP19.3■□□□□ 0.68
NPLOC4-209ENST00000572760 TNS2Q63HR2 1409 aa19.3■□□□□ 0.68
NPLOC4-209ENST00000572760 PKD1L3Q7Z443 1732 aa19.3■□□□□ 0.68
NPLOC4-209ENST00000572760 PRKAR2BP31323 418 aa19.29■□□□□ 0.68
NPLOC4-209ENST00000572760 AMOTQ4VCS5 1084 aa19.29■□□□□ 0.68
NPLOC4-209ENST00000572760 MIER1Q8N108 512 aa19.29■□□□□ 0.68
NPLOC4-209ENST00000572760 RSPH6AQ9H0K4 717 aa19.28■□□□□ 0.68
NPLOC4-209ENST00000572760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.28■□□□□ 0.68
NPLOC4-209ENST00000572760 SHANK3Q9BYB0 1731 aa19.28■□□□□ 0.68
NPLOC4-209ENST00000572760 PCDH11XQ9BZA7 1347 aa19.27■□□□□ 0.68
NPLOC4-209ENST00000572760 PCDH11YQ9BZA8 1340 aa19.27■□□□□ 0.68
NPLOC4-209ENST00000572760 CCER2I3L3R5 266 aa19.27■□□□□ 0.68
NPLOC4-209ENST00000572760 PLEKHG2Q9H7P9 1386 aa19.26■□□□□ 0.67
NPLOC4-209ENST00000572760 MAPK8IP3Q9UPT6 1336 aa19.25■□□□□ 0.67
NPLOC4-209ENST00000572760 C1orf141Q5JVX7 400 aa19.25■□□□□ 0.67
NPLOC4-209ENST00000572760 FAM182BQ5T319 152 aa19.25■□□□□ 0.67
NPLOC4-209ENST00000572760 ZNF530Q6P9A1 599 aaPredicted RBP19.25■□□□□ 0.67
NPLOC4-209ENST00000572760 ILDR2Q71H61 639 aa19.25■□□□□ 0.67
NPLOC4-209ENST00000572760 MARCH10Q8NA82 808 aaPredicted RBP19.25■□□□□ 0.67
NPLOC4-209ENST00000572760 ADAMTS8Q9UP79 889 aa19.25■□□□□ 0.67
NPLOC4-209ENST00000572760 VIRMAQ69YN4 1812 aaKnown RBP19.24■□□□□ 0.67
NPLOC4-209ENST00000572760 IFNL2Q8IZJ0 200 aa19.24■□□□□ 0.67
NPLOC4-209ENST00000572760 FAM196AQ6ZSG2 479 aa19.23■□□□□ 0.67
NPLOC4-209ENST00000572760 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
NPLOC4-209ENST00000572760 GAS2L2Q8NHY3 880 aa19.23■□□□□ 0.67
NPLOC4-209ENST00000572760 PNISRQ8TF01 805 aaKnown RBP19.23■□□□□ 0.67
NPLOC4-209ENST00000572760 DLG5Q8TDM6 1919 aa19.22■□□□□ 0.67
NPLOC4-209ENST00000572760 MTHFSDQ2M296 383 aaKnown RBP19.22■□□□□ 0.67
NPLOC4-209ENST00000572760 CCDC146Q8IYE0 955 aa19.22■□□□□ 0.67
NPLOC4-209ENST00000572760 PHACTR3Q96KR7 559 aa19.22■□□□□ 0.67
NPLOC4-209ENST00000572760 SBF2Q86WG5 1849 aa19.22■□□□□ 0.67
NPLOC4-209ENST00000572760 CYP27B1O15528 508 aa19.21■□□□□ 0.67
NPLOC4-209ENST00000572760 HSP90AB1P08238 724 aaKnown RBP19.2■□□□□ 0.66
NPLOC4-209ENST00000572760 PHKG2P15735 406 aa19.2■□□□□ 0.66
NPLOC4-209ENST00000572760 RUNDC1Q96C34 613 aa19.2■□□□□ 0.66
NPLOC4-209ENST00000572760 AKAP4Q5JQC9 854 aa19.19■□□□□ 0.66
NPLOC4-209ENST00000572760 PLEKHF1Q96S99 279 aa19.19■□□□□ 0.66
NPLOC4-209ENST00000572760 DOT1LQ8TEK3 1739 aa19.18■□□□□ 0.66
NPLOC4-209ENST00000572760 ITGB4P16144 1822 aa19.17■□□□□ 0.66
NPLOC4-209ENST00000572760 ACSBG1Q96GR2 724 aa19.17■□□□□ 0.66
NPLOC4-209ENST00000572760 SCN11AQ9UI33 1791 aa19.16■□□□□ 0.66
NPLOC4-209ENST00000572760 SYTL4Q96C24 671 aaPredicted RBP19.16■□□□□ 0.66
NPLOC4-209ENST00000572760 GNAT3A8MTJ3 354 aa19.15■□□□□ 0.66
NPLOC4-209ENST00000572760 NKX1-1Q15270 411 aaPredicted RBP19.15■□□□□ 0.66
NPLOC4-209ENST00000572760 NFE2L2Q16236 605 aa19.15■□□□□ 0.66
NPLOC4-209ENST00000572760 MPRIPQ6WCQ1 1025 aa19.15■□□□□ 0.66
NPLOC4-209ENST00000572760 RTF1Q92541 710 aaKnown RBP19.15■□□□□ 0.66
NPLOC4-209ENST00000572760 DCAF5Q96JK2 942 aa19.15■□□□□ 0.66
NPLOC4-209ENST00000572760 TRIM37O94972 964 aa19.14■□□□□ 0.65
NPLOC4-209ENST00000572760 SF3B2Q13435 895 aaKnown RBP19.14■□□□□ 0.65
NPLOC4-209ENST00000572760 MAP3K5Q99683 1374 aa19.14■□□□□ 0.65
NPLOC4-209ENST00000572760 BCL9O00512 1426 aa19.14■□□□□ 0.65
NPLOC4-209ENST00000572760 NEUROD2Q15784 382 aa19.13■□□□□ 0.65
NPLOC4-209ENST00000572760 TOGARAM1Q9Y4F4 1720 aa19.12■□□□□ 0.65
NPLOC4-209ENST00000572760 NHSQ6T4R5 1651 aa19.12■□□□□ 0.65
NPLOC4-209ENST00000572760 TMPOP42166 694 aaKnown RBP19.12■□□□□ 0.65
NPLOC4-209ENST00000572760 PRIM1P49642 420 aaKnown RBP19.12■□□□□ 0.65
NPLOC4-209ENST00000572760 RIPK4P57078 832 aa19.12■□□□□ 0.65
NPLOC4-209ENST00000572760 RRP7AQ9Y3A4 280 aaKnown RBP19.12■□□□□ 0.65
NPLOC4-209ENST00000572760 APAF1O14727 1248 aa19.11■□□□□ 0.65
NPLOC4-209ENST00000572760 BTAF1O14981 1849 aa19.1■□□□□ 0.65
NPLOC4-209ENST00000572760 RNMTO43148 476 aaKnown RBP19.1■□□□□ 0.65
NPLOC4-209ENST00000572760 CABP4P57796 275 aa19.1■□□□□ 0.65
NPLOC4-209ENST00000572760 BCL11BQ9C0K0 894 aaPredicted RBP19.1■□□□□ 0.65
NPLOC4-209ENST00000572760 TMOD3Q9NYL9 352 aa19.1■□□□□ 0.65
NPLOC4-209ENST00000572760 ERVV-2B6SEH9 535 aa19.09■□□□□ 0.65
NPLOC4-209ENST00000572760 KCNQ2O43526 872 aa19.09■□□□□ 0.65
NPLOC4-209ENST00000572760 HTATSF1O43719 755 aaKnown RBP19.09■□□□□ 0.65
NPLOC4-209ENST00000572760 LMOD3Q0VAK6 560 aa19.09■□□□□ 0.65
NPLOC4-209ENST00000572760 TEFQ10587 303 aa19.09■□□□□ 0.65
NPLOC4-209ENST00000572760 CCDC125Q86Z20 511 aa19.09■□□□□ 0.65
NPLOC4-209ENST00000572760 LGR6Q9HBX8 967 aa19.09■□□□□ 0.65
NPLOC4-209ENST00000572760 KDM6AO15550 1401 aaPredicted RBP19.08■□□□□ 0.65
NPLOC4-209ENST00000572760 TNS1Q9HBL0 1735 aaKnown RBP19.08■□□□□ 0.64
NPLOC4-209ENST00000572760 SENP3-EIF4A1A0A087X0R7 540 aa19.07■□□□□ 0.64
NPLOC4-209ENST00000572760 MCM10Q7L590 875 aa19.07■□□□□ 0.64
NPLOC4-209ENST00000572760 IL17REQ8NFR9 667 aa19.07■□□□□ 0.64
NPLOC4-209ENST00000572760 ADAMTS7Q9UKP4 1686 aa19.06■□□□□ 0.64
NPLOC4-209ENST00000572760 APBA3O96018 575 aa19.06■□□□□ 0.64
NPLOC4-209ENST00000572760 DCTN1Q14203 1278 aa19.06■□□□□ 0.64
NPLOC4-209ENST00000572760 UPF1Q92900 1129 aaKnown RBP eCLIP19.06■□□□□ 0.647e-34■■■■□ 26.4
NPLOC4-209ENST00000572760 BAG6P46379 1132 aa19.05■□□□□ 0.64
NPLOC4-209ENST00000572760 PTF1AQ7RTS3 328 aa19.05■□□□□ 0.64
NPLOC4-209ENST00000572760 NFATC2IPQ8NCF5 419 aa19.05■□□□□ 0.64
NPLOC4-209ENST00000572760 PIGBQ92521 554 aa19.04■□□□□ 0.64
NPLOC4-209ENST00000572760 SLC52A2Q9HAB3 445 aa19.04■□□□□ 0.64
NPLOC4-209ENST00000572760 SALL2Q9Y467 1007 aaPredicted RBP19.04■□□□□ 0.64
NPLOC4-209ENST00000572760 SIPA1L3O60292 1781 aaPredicted RBP19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms