RNA–Protein interactions for RNA: ENST00000572116.1

ATP2A3-210, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 1 (best)

Gene ATP2A3, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-210ENST00000572116 BTAF1O14981 1849 aa15.57■□□□□ 0.08
ATP2A3-210ENST00000572116 PDE3BQ13370 1112 aa15.56■□□□□ 0.08
ATP2A3-210ENST00000572116 RAPGEF4Q8WZA2 1011 aa15.56■□□□□ 0.08
ATP2A3-210ENST00000572116 PRKRIP1Q9H875 184 aaPredicted RBP15.56■□□□□ 0.08
ATP2A3-210ENST00000572116 MYBBP1AQ9BQG0 1328 aaKnown RBP15.56■□□□□ 0.08
ATP2A3-210ENST00000572116 TOGARAM1Q9Y4F4 1720 aa15.56■□□□□ 0.08
ATP2A3-210ENST00000572116 EXOC5O00471 708 aa15.55■□□□□ 0.08
ATP2A3-210ENST00000572116 TATP17735 454 aaPredicted RBP15.55■□□□□ 0.08
ATP2A3-210ENST00000572116 FAM182BQ5T319 152 aa15.55■□□□□ 0.08
ATP2A3-210ENST00000572116 KDRP35968 1356 aa15.52■□□□□ 0.08
ATP2A3-210ENST00000572116 U2SURPO15042 1029 aaKnown RBP15.52■□□□□ 0.08
ATP2A3-210ENST00000572116 SULT6B1Q6IMI4 303 aa15.52■□□□□ 0.08
ATP2A3-210ENST00000572116 AEBP1Q8IUX7 1158 aa15.52■□□□□ 0.08
ATP2A3-210ENST00000572116 ANP32CO43423 234 aa15.51■□□□□ 0.07
ATP2A3-210ENST00000572116 HMOX1P09601 288 aa15.51■□□□□ 0.07
ATP2A3-210ENST00000572116 ZCRB1Q8TBF4 217 aaKnown RBP15.51■□□□□ 0.07
ATP2A3-210ENST00000572116 RGPD3A6NKT7 1758 aaPredicted RBP15.51■□□□□ 0.07
ATP2A3-210ENST00000572116 RGPD4Q7Z3J3 1758 aa15.51■□□□□ 0.07
ATP2A3-210ENST00000572116 MARCH10Q8NA82 808 aaPredicted RBP15.5■□□□□ 0.07
ATP2A3-210ENST00000572116 NUDCQ9Y266 331 aa15.5■□□□□ 0.07
ATP2A3-210ENST00000572116 PLEKHG2Q9H7P9 1386 aa15.49■□□□□ 0.07
ATP2A3-210ENST00000572116 FAM196AQ6ZSG2 479 aa15.49■□□□□ 0.07
ATP2A3-210ENST00000572116 DDX54Q8TDD1 881 aaKnown RBP15.49■□□□□ 0.07
ATP2A3-210ENST00000572116 PCDH11XQ9BZA7 1347 aa15.48■□□□□ 0.07
ATP2A3-210ENST00000572116 PCDH11YQ9BZA8 1340 aa15.48■□□□□ 0.07
ATP2A3-210ENST00000572116 SOCS7O14512 581 aa15.48■□□□□ 0.07
ATP2A3-210ENST00000572116 SPG7Q9UQ90 795 aa15.48■□□□□ 0.07
ATP2A3-210ENST00000572116 SIPA1L3O60292 1781 aaPredicted RBP15.47■□□□□ 0.07
ATP2A3-210ENST00000572116 U2AF1L5P0DN76 240 aaPredicted RBP15.47■□□□□ 0.07
ATP2A3-210ENST00000572116 U2AF1Q01081 240 aaKnown RBP eCLIP15.47■□□□□ 0.07
ATP2A3-210ENST00000572116 RREB1Q92766 1687 aa15.47■□□□□ 0.07
ATP2A3-210ENST00000572116 LY75O60449 1722 aa15.46■□□□□ 0.07
ATP2A3-210ENST00000572116 BCL9O00512 1426 aa15.46■□□□□ 0.07
ATP2A3-210ENST00000572116 UPF1Q92900 1129 aaKnown RBP eCLIP15.46■□□□□ 0.072e-7■■□□□ 12.7
ATP2A3-210ENST00000572116 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.46■□□□□ 0.07
ATP2A3-210ENST00000572116 ADAMTS7Q9UKP4 1686 aa15.46■□□□□ 0.07
ATP2A3-210ENST00000572116 PLEKHO1Q53GL0 409 aaPredicted RBP15.45■□□□□ 0.06
ATP2A3-210ENST00000572116 TAF1LQ8IZX4 1826 aa15.45■□□□□ 0.06
ATP2A3-210ENST00000572116 NUP188Q5SRE5 1749 aa15.44■□□□□ 0.06
ATP2A3-210ENST00000572116 CYP27B1O15528 508 aa15.44■□□□□ 0.06
ATP2A3-210ENST00000572116 TRIM37O94972 964 aa15.43■□□□□ 0.06
ATP2A3-210ENST00000572116 AMOTQ4VCS5 1084 aa15.43■□□□□ 0.06
ATP2A3-210ENST00000572116 ZNF530Q6P9A1 599 aaPredicted RBP15.43■□□□□ 0.06
ATP2A3-210ENST00000572116 RSPH6AQ9H0K4 717 aa15.43■□□□□ 0.06
ATP2A3-210ENST00000572116 PRKAR2BP31323 418 aa15.42■□□□□ 0.06
ATP2A3-210ENST00000572116 CCDC125Q86Z20 511 aa15.42■□□□□ 0.06
ATP2A3-210ENST00000572116 IFNL2Q8IZJ0 200 aa15.42■□□□□ 0.06
ATP2A3-210ENST00000572116 ACSBG1Q96GR2 724 aa15.42■□□□□ 0.06
ATP2A3-210ENST00000572116 FCHSD2O94868 740 aa15.41■□□□□ 0.06
ATP2A3-210ENST00000572116 PHKG2P15735 406 aa15.41■□□□□ 0.06
ATP2A3-210ENST00000572116 SF3B2Q13435 895 aaKnown RBP15.41■□□□□ 0.06
ATP2A3-210ENST00000572116 WDR43Q15061 677 aaKnown RBP eCLIP15.4■□□□□ 0.06
ATP2A3-210ENST00000572116 CCDC184Q52MB2 194 aa15.4■□□□□ 0.06
ATP2A3-210ENST00000572116 C1orf141Q5JVX7 400 aa15.4■□□□□ 0.06
ATP2A3-210ENST00000572116 PAPPAQ13219 1627 aa15.39■□□□□ 0.05
ATP2A3-210ENST00000572116 DIEXFQ68CQ4 756 aaKnown RBP15.39■□□□□ 0.05
ATP2A3-210ENST00000572116 KDM6AO15550 1401 aaPredicted RBP15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 KCNQ2O43526 872 aa15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 NKX1-1Q15270 411 aaPredicted RBP15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 MTHFSDQ2M296 383 aaKnown RBP15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 PTF1AQ7RTS3 328 aa15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 PHACTR3Q96KR7 559 aa15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 BCL11BQ9C0K0 894 aaPredicted RBP15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 MRS2Q9HD23 443 aa15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 UBR2Q8IWV8 1755 aa15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 TUBGCP6Q96RT7 1819 aa15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 C5P01031 1676 aa15.38■□□□□ 0.05
ATP2A3-210ENST00000572116 APBA3O96018 575 aa15.37■□□□□ 0.05
ATP2A3-210ENST00000572116 NEFMP07197 916 aa15.37■□□□□ 0.05
ATP2A3-210ENST00000572116 HSP90AB1P08238 724 aaKnown RBP15.37■□□□□ 0.05
ATP2A3-210ENST00000572116 AKAP4Q5JQC9 854 aa15.37■□□□□ 0.05
ATP2A3-210ENST00000572116 SYTL4Q96C24 671 aaPredicted RBP15.37■□□□□ 0.05
ATP2A3-210ENST00000572116 PNNQ9H307 717 aaKnown RBP15.37■□□□□ 0.05
ATP2A3-210ENST00000572116 BAG6P46379 1132 aa15.36■□□□□ 0.05
ATP2A3-210ENST00000572116 PRIM1P49642 420 aaKnown RBP15.36■□□□□ 0.05
ATP2A3-210ENST00000572116 GAS2L2Q8NHY3 880 aa15.36■□□□□ 0.05
ATP2A3-210ENST00000572116 MAP3K5Q99683 1374 aa15.36■□□□□ 0.05
ATP2A3-210ENST00000572116 MRC1P22897 1456 aa15.35■□□□□ 0.05
ATP2A3-210ENST00000572116 DEFB132Q7Z7B7 95 aa15.35■□□□□ 0.05
ATP2A3-210ENST00000572116 DCAF5Q96JK2 942 aa15.35■□□□□ 0.05
ATP2A3-210ENST00000572116 PLEKHF1Q96S99 279 aa15.35■□□□□ 0.05
ATP2A3-210ENST00000572116 MAPK8IP3Q9UPT6 1336 aa15.35■□□□□ 0.05
ATP2A3-210ENST00000572116 ZNF831Q5JPB2 1677 aa15.35■□□□□ 0.05
ATP2A3-210ENST00000572116 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
ATP2A3-210ENST00000572116 KDM3BQ7LBC6 1761 aa15.34■□□□□ 0.05
ATP2A3-210ENST00000572116 MPRIPQ6WCQ1 1025 aa15.34■□□□□ 0.05
ATP2A3-210ENST00000572116 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
ATP2A3-210ENST00000572116 GNAT3A8MTJ3 354 aa15.33■□□□□ 0.04
ATP2A3-210ENST00000572116 EN1Q05925 392 aaPredicted RBP15.33■□□□□ 0.04
ATP2A3-210ENST00000572116 CCDC146Q8IYE0 955 aa15.33■□□□□ 0.04
ATP2A3-210ENST00000572116 QSER1Q2KHR3 1735 aa15.33■□□□□ 0.04
ATP2A3-210ENST00000572116 TMOD3Q9NYL9 352 aa15.32■□□□□ 0.04
ATP2A3-210ENST00000572116 TJP1Q07157 1748 aa15.31■□□□□ 0.04
ATP2A3-210ENST00000572116 ERVV-2B6SEH9 535 aa15.31■□□□□ 0.04
ATP2A3-210ENST00000572116 RNMTO43148 476 aaKnown RBP15.31■□□□□ 0.04
ATP2A3-210ENST00000572116 LGR6Q9HBX8 967 aa15.31■□□□□ 0.04
ATP2A3-210ENST00000572116 PLSCR1O15162 318 aa15.3■□□□□ 0.04
ATP2A3-210ENST00000572116 CABP4P57796 275 aa15.3■□□□□ 0.04
ATP2A3-210ENST00000572116 EZH2Q15910 746 aaKnown RBP15.3■□□□□ 0.04
ATP2A3-210ENST00000572116 NFE2L2Q16236 605 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms