RNA–Protein interactions for RNA: ENST00000571543.1

ABR-213, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 2

Gene ABR, Length 384 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-213ENST00000571543 KIF7Q2M1P5 1343 aa28.78■■■□□ 2.2
ABR-213ENST00000571543 TNNT2P45379 298 aaPredicted RBP28.78■■■□□ 2.2
ABR-213ENST00000571543 PROM2Q8N271 834 aa28.77■■■□□ 2.2
ABR-213ENST00000571543 MEGF6O75095 1541 aa28.77■■■□□ 2.2
ABR-213ENST00000571543 POLKQ9UBT6 870 aa28.76■■■□□ 2.19
ABR-213ENST00000571543 MAP2P11137 1827 aaKnown RBP28.76■■■□□ 2.19
ABR-213ENST00000571543 ZCRB1Q8TBF4 217 aaKnown RBP28.75■■■□□ 2.19
ABR-213ENST00000571543 ANKRD26Q9UPS8 1709 aa28.74■■■□□ 2.19
ABR-213ENST00000571543 PAPPAQ13219 1627 aa28.74■■■□□ 2.19
ABR-213ENST00000571543 WASHC2AQ641Q2 1341 aa28.73■■■□□ 2.19
ABR-213ENST00000571543 DOT1LQ8TEK3 1739 aa28.72■■■□□ 2.19
ABR-213ENST00000571543 RAPGEF4Q8WZA2 1011 aa28.72■■■□□ 2.19
ABR-213ENST00000571543 TXNRD1Q16881 649 aa28.71■■■□□ 2.19
ABR-213ENST00000571543 KNSTRNQ9Y448 316 aa28.71■■■□□ 2.19
ABR-213ENST00000571543 NSD2O96028 1365 aa28.7■■■□□ 2.18
ABR-213ENST00000571543 TATP17735 454 aaPredicted RBP28.69■■■□□ 2.18
ABR-213ENST00000571543 SPON1Q9HCB6 807 aa28.69■■■□□ 2.18
ABR-213ENST00000571543 MORC1Q86VD1 984 aa28.67■■■□□ 2.18
ABR-213ENST00000571543 PDGFDQ9GZP0 370 aaPredicted RBP28.67■■■□□ 2.18
ABR-213ENST00000571543 EYA1Q99502 592 aa28.64■■■□□ 2.18
ABR-213ENST00000571543 PRIM1P49642 420 aaKnown RBP28.63■■■□□ 2.17
ABR-213ENST00000571543 EIF4A2Q14240 407 aaKnown RBP28.62■■■□□ 2.17
ABR-213ENST00000571543 AMER1Q5JTC6 1135 aaPredicted RBP28.62■■■□□ 2.17
ABR-213ENST00000571543 SYTL4Q96C24 671 aaPredicted RBP28.62■■■□□ 2.17
ABR-213ENST00000571543 STK32BQ9NY57 414 aa28.62■■■□□ 2.17
ABR-213ENST00000571543 PPP1R1BQ9UD71 204 aaPredicted RBP28.62■■■□□ 2.17
ABR-213ENST00000571543 LY75O60449 1722 aa28.62■■■□□ 2.17
ABR-213ENST00000571543 TUBGCP6Q96RT7 1819 aa28.62■■■□□ 2.17
ABR-213ENST00000571543 NCAPD2Q15021 1401 aa28.61■■■□□ 2.17
ABR-213ENST00000571543 QSER1Q2KHR3 1735 aa28.61■■■□□ 2.17
ABR-213ENST00000571543 SLC15A2Q16348 729 aa28.61■■■□□ 2.17
ABR-213ENST00000571543 PCDH11XQ9BZA7 1347 aa28.59■■■□□ 2.17
ABR-213ENST00000571543 PCDH11YQ9BZA8 1340 aa28.59■■■□□ 2.17
ABR-213ENST00000571543 PER1O15534 1290 aaPredicted RBP28.58■■■□□ 2.17
ABR-213ENST00000571543 ZBTB7AO95365 584 aa28.58■■■□□ 2.17
ABR-213ENST00000571543 CYP27B1O15528 508 aa28.56■■■□□ 2.16
ABR-213ENST00000571543 LRRC4BQ9NT99 713 aa28.53■■■□□ 2.16
ABR-213ENST00000571543 PKD1L3Q7Z443 1732 aa28.52■■■□□ 2.16
ABR-213ENST00000571543 PTGER2P43116 358 aa28.52■■■□□ 2.16
ABR-213ENST00000571543 SPG7Q9UQ90 795 aa28.52■■■□□ 2.16
ABR-213ENST00000571543 CC2D1BQ5T0F9 858 aaKnown RBP28.51■■■□□ 2.15
ABR-213ENST00000571543 IGSF1Q8N6C5 1336 aa28.5■■■□□ 2.15
ABR-213ENST00000571543 ZNF827Q17R98 1081 aa28.5■■■□□ 2.15
ABR-213ENST00000571543 ATF5Q9Y2D1 282 aaPredicted RBP28.5■■■□□ 2.15
ABR-213ENST00000571543 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.49■■■□□ 2.15
ABR-213ENST00000571543 COL24A1Q17RW2 1714 aa28.49■■■□□ 2.15
ABR-213ENST00000571543 TOGARAM1Q9Y4F4 1720 aa28.49■■■□□ 2.15
ABR-213ENST00000571543 ITGB4P16144 1822 aa28.48■■■□□ 2.15
ABR-213ENST00000571543 SLC27A3Q5K4L6 730 aa28.48■■■□□ 2.15
ABR-213ENST00000571543 KCNQ4P56696 695 aa28.47■■■□□ 2.15
ABR-213ENST00000571543 NKX1-1Q15270 411 aaPredicted RBP28.46■■■□□ 2.15
ABR-213ENST00000571543 MTFR1LQ9H019 292 aa28.46■■■□□ 2.15
ABR-213ENST00000571543 MTHFSP49914 203 aa28.45■■■□□ 2.14
ABR-213ENST00000571543 CNGB1Q14028 1251 aaPredicted RBP28.45■■■□□ 2.14
ABR-213ENST00000571543 MPRIPQ6WCQ1 1025 aa28.45■■■□□ 2.14
ABR-213ENST00000571543 SGIP1Q9BQI5 828 aa28.44■■■□□ 2.14
ABR-213ENST00000571543 TAF1LQ8IZX4 1826 aa28.43■■■□□ 2.14
ABR-213ENST00000571543 UTRNP46939 3433 aa28.43■■■□□ 2.14
ABR-213ENST00000571543 C5P01031 1676 aa28.43■■■□□ 2.14
ABR-213ENST00000571543 IL13P35225 146 aa28.43■■■□□ 2.14
ABR-213ENST00000571543 AKT1S1Q96B36 256 aa28.43■■■□□ 2.14
ABR-213ENST00000571543 PHKG2P15735 406 aa28.42■■■□□ 2.14
ABR-213ENST00000571543 AEBP1Q8IUX7 1158 aa28.42■■■□□ 2.14
ABR-213ENST00000571543 IFNL2Q8IZJ0 200 aa28.42■■■□□ 2.14
ABR-213ENST00000571543 NPC1L1Q9UHC9 1359 aa28.41■■■□□ 2.14
ABR-213ENST00000571543 CCNL1Q9UK58 526 aaPredicted RBP28.41■■■□□ 2.14
ABR-213ENST00000571543 SULT6B1Q6IMI4 303 aa28.39■■■□□ 2.14
ABR-213ENST00000571543 PLEKHG2Q9H7P9 1386 aa28.38■■■□□ 2.13
ABR-213ENST00000571543 PIGBQ92521 554 aa28.38■■■□□ 2.13
ABR-213ENST00000571543 FHDC1Q9C0D6 1143 aaPredicted RBP28.38■■■□□ 2.13
ABR-213ENST00000571543 PLEKHO1Q53GL0 409 aaPredicted RBP28.37■■■□□ 2.13
ABR-213ENST00000571543 PNPLA7Q6ZV29 1317 aa28.36■■■□□ 2.13
ABR-213ENST00000571543 PALLDQ8WX93 1383 aa28.36■■■□□ 2.13
ABR-213ENST00000571543 YY1P25490 414 aa28.35■■■□□ 2.13
ABR-213ENST00000571543 CHD4Q14839 1912 aa28.35■■■□□ 2.13
ABR-213ENST00000571543 DCAF8L1A6NGE4 600 aa28.34■■■□□ 2.13
ABR-213ENST00000571543 AMOTQ4VCS5 1084 aa28.34■■■□□ 2.13
ABR-213ENST00000571543 ZNF530Q6P9A1 599 aaPredicted RBP28.33■■■□□ 2.13
ABR-213ENST00000571543 SMARCC1Q92922 1105 aaPredicted RBP28.33■■■□□ 2.13
ABR-213ENST00000571543 SYT17Q9BSW7 474 aa28.33■■■□□ 2.13
ABR-213ENST00000571543 TMOD3Q9NYL9 352 aa28.33■■■□□ 2.13
ABR-213ENST00000571543 TFCP2L1Q9NZI6 479 aa28.33■■■□□ 2.13
ABR-213ENST00000571543 KDRP35968 1356 aa28.33■■■□□ 2.13
ABR-213ENST00000571543 DIAPH1O60610 1272 aaKnown RBP28.31■■■□□ 2.12
ABR-213ENST00000571543 ARXQ96QS3 562 aa28.31■■■□□ 2.12
ABR-213ENST00000571543 MAP3K5Q99683 1374 aa28.29■■■□□ 2.12
ABR-213ENST00000571543 HSP90AB1P08238 724 aaKnown RBP28.29■■■□□ 2.12
ABR-213ENST00000571543 HMOX1P09601 288 aa28.28■■■□□ 2.12
ABR-213ENST00000571543 SLC16A10Q8TF71 515 aa28.28■■■□□ 2.12
ABR-213ENST00000571543 DCAF5Q96JK2 942 aa28.28■■■□□ 2.12
ABR-213ENST00000571543 ASAP1Q9ULH1 1129 aa28.28■■■□□ 2.12
ABR-213ENST00000571543 C4BP0C0L5 1744 aa28.27■■■□□ 2.12
ABR-213ENST00000571543 C1orf141Q5JVX7 400 aa28.27■■■□□ 2.12
ABR-213ENST00000571543 UBR3Q6ZT12 1888 aa28.26■■■□□ 2.11
ABR-213ENST00000571543 ERVV-2B6SEH9 535 aa28.26■■■□□ 2.11
ABR-213ENST00000571543 KDM6AO15550 1401 aaPredicted RBP28.25■■■□□ 2.11
ABR-213ENST00000571543 GOLGB1Q14789 3259 aaKnown RBP28.24■■■□□ 2.11
ABR-213ENST00000571543 ATG3Q9NT62 314 aa28.24■■■□□ 2.11
ABR-213ENST00000571543 COL3A1P02461 1466 aaPredicted RBP28.23■■■□□ 2.11
ABR-213ENST00000571543 LOC102724428A0A0B4J2F2 783 aa28.23■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms