RNA–Protein interactions for RNA: ENST00000571459.5

LITAF-207, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5 BASIC

Gene LITAF, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-207ENST00000571459 RGPD1P0DJD0 1748 aa13.76□□□□□ -0.21
LITAF-207ENST00000571459 MARCH10Q8NA82 808 aaPredicted RBP13.76□□□□□ -0.21
LITAF-207ENST00000571459 ZCRB1Q8TBF4 217 aaKnown RBP13.76□□□□□ -0.21
LITAF-207ENST00000571459 DDX54Q8TDD1 881 aaKnown RBP13.76□□□□□ -0.21
LITAF-207ENST00000571459 LRRC37A3O60309 1634 aa13.75□□□□□ -0.21
LITAF-207ENST00000571459 OVOS2A0A0G2JMS6 1433 aa13.75□□□□□ -0.21
LITAF-207ENST00000571459 U2AF1L5P0DN76 240 aaPredicted RBP13.75□□□□□ -0.21
LITAF-207ENST00000571459 U2AF1Q01081 240 aaKnown RBP eCLIP13.75□□□□□ -0.21
LITAF-207ENST00000571459 TNS2Q63HR2 1409 aa13.74□□□□□ -0.21
LITAF-207ENST00000571459 FAM196AQ6ZSG2 479 aa13.74□□□□□ -0.21
LITAF-207ENST00000571459 SPG7Q9UQ90 795 aa13.74□□□□□ -0.21
LITAF-207ENST00000571459 KDRP35968 1356 aa13.73□□□□□ -0.21
LITAF-207ENST00000571459 PLEKHO1Q53GL0 409 aaPredicted RBP13.72□□□□□ -0.21
LITAF-207ENST00000571459 DIEXFQ68CQ4 756 aaKnown RBP13.72□□□□□ -0.21
LITAF-207ENST00000571459 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.72□□□□□ -0.21
LITAF-207ENST00000571459 CYP27B1O15528 508 aa13.71□□□□□ -0.21
LITAF-207ENST00000571459 CCDC184Q52MB2 194 aa13.71□□□□□ -0.21
LITAF-207ENST00000571459 SHANK3Q9BYB0 1731 aa13.7□□□□□ -0.22
LITAF-207ENST00000571459 PCDH11XQ9BZA7 1347 aa13.7□□□□□ -0.22
LITAF-207ENST00000571459 PCDH11YQ9BZA8 1340 aa13.7□□□□□ -0.22
LITAF-207ENST00000571459 FCHSD2O94868 740 aa13.7□□□□□ -0.22
LITAF-207ENST00000571459 AMOTQ4VCS5 1084 aa13.7□□□□□ -0.22
LITAF-207ENST00000571459 RSPH6AQ9H0K4 717 aa13.7□□□□□ -0.22
LITAF-207ENST00000571459 TRIM37O94972 964 aa13.69□□□□□ -0.22
LITAF-207ENST00000571459 PRKAR2BP31323 418 aa13.69□□□□□ -0.22
LITAF-207ENST00000571459 ZNF530Q6P9A1 599 aaPredicted RBP13.69□□□□□ -0.22
LITAF-207ENST00000571459 UPF1Q92900 1129 aaKnown RBP eCLIP13.69□□□□□ -0.226e-7■■□□□ 13.5
LITAF-207ENST00000571459 PKD1L3Q7Z443 1732 aa13.69□□□□□ -0.22
LITAF-207ENST00000571459 WDR43Q15061 677 aaKnown RBP eCLIP13.68□□□□□ -0.22
LITAF-207ENST00000571459 IFNL2Q8IZJ0 200 aa13.68□□□□□ -0.22
LITAF-207ENST00000571459 PHACTR3Q96KR7 559 aa13.68□□□□□ -0.22
LITAF-207ENST00000571459 MRS2Q9HD23 443 aa13.68□□□□□ -0.22
LITAF-207ENST00000571459 SBF2Q86WG5 1849 aa13.68□□□□□ -0.22
LITAF-207ENST00000571459 PHKG2P15735 406 aa13.67□□□□□ -0.22
LITAF-207ENST00000571459 MTHFSDQ2M296 383 aaKnown RBP13.67□□□□□ -0.22
LITAF-207ENST00000571459 ACSBG1Q96GR2 724 aa13.67□□□□□ -0.22
LITAF-207ENST00000571459 PLEKHG2Q9H7P9 1386 aa13.67□□□□□ -0.22
LITAF-207ENST00000571459 C1orf141Q5JVX7 400 aa13.66□□□□□ -0.22
LITAF-207ENST00000571459 PTF1AQ7RTS3 328 aa13.66□□□□□ -0.22
LITAF-207ENST00000571459 CCDC125Q86Z20 511 aa13.66□□□□□ -0.22
LITAF-207ENST00000571459 PNNQ9H307 717 aaKnown RBP13.66□□□□□ -0.22
LITAF-207ENST00000571459 ADAMTS8Q9UP79 889 aa13.66□□□□□ -0.22
LITAF-207ENST00000571459 BCL9O00512 1426 aa13.65□□□□□ -0.22
LITAF-207ENST00000571459 KCNQ2O43526 872 aa13.65□□□□□ -0.22
LITAF-207ENST00000571459 NEFMP07197 916 aa13.65□□□□□ -0.22
LITAF-207ENST00000571459 PRIM1P49642 420 aaKnown RBP13.65□□□□□ -0.22
LITAF-207ENST00000571459 SF3B2Q13435 895 aaKnown RBP13.65□□□□□ -0.22
LITAF-207ENST00000571459 NKX1-1Q15270 411 aaPredicted RBP13.65□□□□□ -0.22
LITAF-207ENST00000571459 SYTL4Q96C24 671 aaPredicted RBP13.65□□□□□ -0.22
LITAF-207ENST00000571459 GAS2L2Q8NHY3 880 aa13.64□□□□□ -0.23
LITAF-207ENST00000571459 PLEKHF1Q96S99 279 aa13.64□□□□□ -0.23
LITAF-207ENST00000571459 BCL11BQ9C0K0 894 aaPredicted RBP13.64□□□□□ -0.23
LITAF-207ENST00000571459 APBA3O96018 575 aa13.63□□□□□ -0.23
LITAF-207ENST00000571459 HSP90AB1P08238 724 aaKnown RBP13.63□□□□□ -0.23
LITAF-207ENST00000571459 AKAP4Q5JQC9 854 aa13.63□□□□□ -0.23
LITAF-207ENST00000571459 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
LITAF-207ENST00000571459 CCDC146Q8IYE0 955 aa13.63□□□□□ -0.23
LITAF-207ENST00000571459 PNISRQ8TF01 805 aaKnown RBP13.63□□□□□ -0.23
LITAF-207ENST00000571459 MIER1Q8N108 512 aa13.62□□□□□ -0.23
LITAF-207ENST00000571459 DCAF5Q96JK2 942 aa13.62□□□□□ -0.23
LITAF-207ENST00000571459 MAPK8IP3Q9UPT6 1336 aa13.62□□□□□ -0.23
LITAF-207ENST00000571459 DOT1LQ8TEK3 1739 aa13.61□□□□□ -0.23
LITAF-207ENST00000571459 GNAT3A8MTJ3 354 aa13.61□□□□□ -0.23
LITAF-207ENST00000571459 DEFB132Q7Z7B7 95 aa13.61□□□□□ -0.23
LITAF-207ENST00000571459 ITGB4P16144 1822 aa13.6□□□□□ -0.23
LITAF-207ENST00000571459 BAG6P46379 1132 aa13.6□□□□□ -0.23
LITAF-207ENST00000571459 RUNDC1Q96C34 613 aa13.6□□□□□ -0.23
LITAF-207ENST00000571459 TNS1Q9HBL0 1735 aaKnown RBP13.6□□□□□ -0.23
LITAF-207ENST00000571459 LGR6Q9HBX8 967 aa13.6□□□□□ -0.23
LITAF-207ENST00000571459 VIRMAQ69YN4 1812 aaKnown RBP13.6□□□□□ -0.23
LITAF-207ENST00000571459 NHSQ6T4R5 1651 aa13.59□□□□□ -0.23
LITAF-207ENST00000571459 TOGARAM1Q9Y4F4 1720 aa13.59□□□□□ -0.23
LITAF-207ENST00000571459 KDM6AO15550 1401 aaPredicted RBP13.59□□□□□ -0.23
LITAF-207ENST00000571459 ERVV-2B6SEH9 535 aa13.59□□□□□ -0.23
LITAF-207ENST00000571459 EN1Q05925 392 aaPredicted RBP13.59□□□□□ -0.23
LITAF-207ENST00000571459 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
LITAF-207ENST00000571459 FAM9BQ8IZU0 186 aa13.59□□□□□ -0.23
LITAF-207ENST00000571459 BTAF1O14981 1849 aa13.59□□□□□ -0.23
LITAF-207ENST00000571459 MAP3K5Q99683 1374 aa13.58□□□□□ -0.23
LITAF-207ENST00000571459 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.23
LITAF-207ENST00000571459 CCER2I3L3R5 266 aa13.58□□□□□ -0.24
LITAF-207ENST00000571459 RNMTO43148 476 aaKnown RBP13.58□□□□□ -0.24
LITAF-207ENST00000571459 CABP4P57796 275 aa13.58□□□□□ -0.24
LITAF-207ENST00000571459 NFATC2IPQ8NCF5 419 aa13.58□□□□□ -0.24
LITAF-207ENST00000571459 IL17REQ8NFR9 667 aa13.58□□□□□ -0.24
LITAF-207ENST00000571459 PIGBQ92521 554 aa13.58□□□□□ -0.24
LITAF-207ENST00000571459 TMOD3Q9NYL9 352 aa13.58□□□□□ -0.24
LITAF-207ENST00000571459 DLG5Q8TDM6 1919 aa13.58□□□□□ -0.24
LITAF-207ENST00000571459 NEUROD2Q15784 382 aa13.57□□□□□ -0.24
LITAF-207ENST00000571459 RTF1Q92541 710 aaKnown RBP13.57□□□□□ -0.24
LITAF-207ENST00000571459 RRP7AQ9Y3A4 280 aaKnown RBP13.57□□□□□ -0.24
LITAF-207ENST00000571459 PLSCR1O15162 318 aa13.56□□□□□ -0.24
LITAF-207ENST00000571459 TMPOP42166 694 aaKnown RBP13.56□□□□□ -0.24
LITAF-207ENST00000571459 RIPK4P57078 832 aa13.56□□□□□ -0.24
LITAF-207ENST00000571459 DCTN1Q14203 1278 aa13.56□□□□□ -0.24
LITAF-207ENST00000571459 EZH2Q15910 746 aaKnown RBP13.56□□□□□ -0.24
LITAF-207ENST00000571459 MCM10Q7L590 875 aa13.56□□□□□ -0.24
LITAF-207ENST00000571459 APAF1O14727 1248 aa13.55□□□□□ -0.24
LITAF-207ENST00000571459 HTATSF1O43719 755 aaKnown RBP13.55□□□□□ -0.24
LITAF-207ENST00000571459 CAMKK2Q96RR4 588 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms