RNA–Protein interactions for RNA: ENST00000569997.1

COX4I1-217, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

Gene COX4I1, Length 3,946 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-217ENST00000569997 KCNA6P17658 529 aa11.65□□□□□ -0.54
COX4I1-217ENST00000569997 ARHGEF28Q8N1W1 1705 aaKnown RBP11.65□□□□□ -0.54
COX4I1-217ENST00000569997 GOLGA6L3A6NEY3 463 aa11.65□□□□□ -0.54
COX4I1-217ENST00000569997 CHL1O00533 1208 aa11.65□□□□□ -0.55
COX4I1-217ENST00000569997 PTMSP20962 102 aa11.65□□□□□ -0.55
COX4I1-217ENST00000569997 EYA1Q99502 592 aa11.65□□□□□ -0.55
COX4I1-217ENST00000569997 HDAC5Q9UQL6 1122 aa11.65□□□□□ -0.55
COX4I1-217ENST00000569997 PLEKHG1Q9ULL1 1385 aa11.65□□□□□ -0.55
COX4I1-217ENST00000569997 USHBP1Q8N6Y0 703 aa11.64□□□□□ -0.55
COX4I1-217ENST00000569997 RICTORQ6R327 1708 aa11.64□□□□□ -0.55
COX4I1-217ENST00000569997 BRPF1P55201 1214 aaPredicted RBP11.64□□□□□ -0.55
COX4I1-217ENST00000569997 TAF7Q15545 349 aaPredicted RBP11.64□□□□□ -0.55
COX4I1-217ENST00000569997 PKNOX2Q96KN3 472 aa11.64□□□□□ -0.55
COX4I1-217ENST00000569997 CDK12Q9NYV4 1490 aaPredicted RBP11.64□□□□□ -0.55
COX4I1-217ENST00000569997 PLEKHO1Q53GL0 409 aaPredicted RBP11.64□□□□□ -0.55
COX4I1-217ENST00000569997 CLTCQ00610 1675 aaKnown RBP11.63□□□□□ -0.55
COX4I1-217ENST00000569997 ZNF853P0CG23 659 aa11.63□□□□□ -0.55
COX4I1-217ENST00000569997 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.63□□□□□ -0.55
COX4I1-217ENST00000569997 DLC1Q96QB1 1528 aa11.63□□□□□ -0.55
COX4I1-217ENST00000569997 SMARCA5O60264 1052 aaPredicted RBP11.63□□□□□ -0.55
COX4I1-217ENST00000569997 TBC1D9Q6ZT07 1266 aa11.63□□□□□ -0.55
COX4I1-217ENST00000569997 MEIS3Q99687 375 aa11.63□□□□□ -0.55
COX4I1-217ENST00000569997 ZNF530Q6P9A1 599 aaPredicted RBP11.63□□□□□ -0.55
COX4I1-217ENST00000569997 KIAA1211Q6ZU35 1233 aa11.63□□□□□ -0.55
COX4I1-217ENST00000569997 ANKRD44Q8N8A2 993 aa11.63□□□□□ -0.55
COX4I1-217ENST00000569997 CPSF1Q10570 1443 aaKnown RBP11.63□□□□□ -0.55
COX4I1-217ENST00000569997 USP32Q8NFA0 1604 aa11.62□□□□□ -0.55
COX4I1-217ENST00000569997 DIP2BQ9P265 1576 aa11.62□□□□□ -0.55
COX4I1-217ENST00000569997 KCNH5Q8NCM2 988 aa11.62□□□□□ -0.55
COX4I1-217ENST00000569997 SIGLEC1Q9BZZ2 1709 aa11.62□□□□□ -0.55
COX4I1-217ENST00000569997 XPCQ01831 940 aaPredicted RBP11.62□□□□□ -0.55
COX4I1-217ENST00000569997 PROSER2Q86WR7 435 aaPredicted RBP11.62□□□□□ -0.55
COX4I1-217ENST00000569997 FLIIQ13045 1269 aa11.62□□□□□ -0.55
COX4I1-217ENST00000569997 ABCC4O15439 1325 aa11.62□□□□□ -0.55
COX4I1-217ENST00000569997 SBNO1A3KN83 1393 aa11.61□□□□□ -0.55
COX4I1-217ENST00000569997 CD163L1Q9NR16 1453 aa11.61□□□□□ -0.55
COX4I1-217ENST00000569997 RABEP1Q15276 862 aa11.61□□□□□ -0.55
COX4I1-217ENST00000569997 TRIM44Q96DX7 344 aaPredicted RBP11.61□□□□□ -0.55
COX4I1-217ENST00000569997 C9orf78Q9NZ63 289 aaPredicted RBP11.61□□□□□ -0.55
COX4I1-217ENST00000569997 EXOC6BQ9Y2D4 811 aa11.61□□□□□ -0.55
COX4I1-217ENST00000569997 LRRCC1Q9C099 1032 aa11.61□□□□□ -0.55
COX4I1-217ENST00000569997 DCTPP1Q9H773 170 aa11.61□□□□□ -0.55
COX4I1-217ENST00000569997 MCM4P33991 863 aa11.61□□□□□ -0.55
COX4I1-217ENST00000569997 K7ELQ4 463 aaPredicted RBP11.6□□□□□ -0.55
COX4I1-217ENST00000569997 HTATSF1O43719 755 aaKnown RBP11.6□□□□□ -0.55
COX4I1-217ENST00000569997 KCNJ4P48050 445 aa11.6□□□□□ -0.55
COX4I1-217ENST00000569997 IL27Q8NEV9 243 aa11.6□□□□□ -0.55
COX4I1-217ENST00000569997 ANO2Q9NQ90 1003 aa11.6□□□□□ -0.55
COX4I1-217ENST00000569997 PIK3R4Q99570 1358 aa11.6□□□□□ -0.55
COX4I1-217ENST00000569997 USP6P35125 1406 aa11.6□□□□□ -0.55
COX4I1-217ENST00000569997 SURF6O75683 361 aaKnown RBP11.6□□□□□ -0.55
COX4I1-217ENST00000569997 SRCIN1Q9C0H9 1055 aa11.6□□□□□ -0.55
COX4I1-217ENST00000569997 LRRC7Q96NW7 1537 aa11.6□□□□□ -0.55
COX4I1-217ENST00000569997 NLRP1Q9C000 1473 aa11.59□□□□□ -0.55
COX4I1-217ENST00000569997 TRAK2O60296 914 aa11.59□□□□□ -0.55
COX4I1-217ENST00000569997 HOXC9P31274 260 aa11.59□□□□□ -0.55
COX4I1-217ENST00000569997 NOL8Q76FK4 1167 aaKnown RBP11.59□□□□□ -0.55
COX4I1-217ENST00000569997 RAPGEF4Q8WZA2 1011 aa11.59□□□□□ -0.55
COX4I1-217ENST00000569997 CEP85Q6P2H3 762 aa11.59□□□□□ -0.55
COX4I1-217ENST00000569997 GPATCH3Q96I76 525 aa11.59□□□□□ -0.55
COX4I1-217ENST00000569997 SPATA31D1Q6ZQQ2 1576 aa11.59□□□□□ -0.55
COX4I1-217ENST00000569997 TTC22Q5TAA0 569 aa11.59□□□□□ -0.55
COX4I1-217ENST00000569997 NLRP2Q9NX02 1062 aa11.59□□□□□ -0.55
COX4I1-217ENST00000569997 USP19O94966 1318 aa11.58□□□□□ -0.55
COX4I1-217ENST00000569997 ERC2O15083 957 aa11.58□□□□□ -0.56
COX4I1-217ENST00000569997 ATF3P18847 181 aa11.58□□□□□ -0.56
COX4I1-217ENST00000569997 SKOR2Q2VWA4 1001 aaPredicted RBP11.58□□□□□ -0.56
COX4I1-217ENST00000569997 BTBD11A6QL63 1104 aa11.58□□□□□ -0.56
COX4I1-217ENST00000569997 HSP90AB4PQ58FF6 505 aa11.58□□□□□ -0.56
COX4I1-217ENST00000569997 C16orf71Q8IYS4 520 aaPredicted RBP11.58□□□□□ -0.56
COX4I1-217ENST00000569997 COL3A1P02461 1466 aaPredicted RBP11.58□□□□□ -0.56
COX4I1-217ENST00000569997 ARHGEF10O15013 1369 aa11.58□□□□□ -0.56
COX4I1-217ENST00000569997 BRPF3Q9ULD4 1205 aa11.58□□□□□ -0.56
COX4I1-217ENST00000569997 CIZ1Q9ULV3 898 aaPredicted RBP11.58□□□□□ -0.56
COX4I1-217ENST00000569997 KIAA0232Q92628 1395 aa11.58□□□□□ -0.56
COX4I1-217ENST00000569997 DDX58O95786 925 aaKnown RBP11.57□□□□□ -0.56
COX4I1-217ENST00000569997 G2E3Q7L622 706 aa11.57□□□□□ -0.56
COX4I1-217ENST00000569997 PLEKHM2Q8IWE5 1019 aa11.57□□□□□ -0.56
COX4I1-217ENST00000569997 NUCB2P80303 420 aa11.56□□□□□ -0.56
COX4I1-217ENST00000569997 DDX49Q9Y6V7 483 aaKnown RBP11.56□□□□□ -0.56
COX4I1-217ENST00000569997 LRRFIP2Q9Y608 721 aaKnown RBP11.56□□□□□ -0.56
COX4I1-217ENST00000569997 NEXNQ0ZGT2 675 aa11.56□□□□□ -0.56
COX4I1-217ENST00000569997 AIMP1Q12904 312 aaKnown RBP11.56□□□□□ -0.56
COX4I1-217ENST00000569997 MSH6P52701 1360 aa11.56□□□□□ -0.56
COX4I1-217ENST00000569997 KIF24Q5T7B8 1368 aa11.56□□□□□ -0.56
COX4I1-217ENST00000569997 SHPRHQ149N8 1683 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 RBM25P49756 843 aaKnown RBP11.55□□□□□ -0.56
COX4I1-217ENST00000569997 MPRIPQ6WCQ1 1025 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 IL1RAPL2Q9NP60 686 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 SRGAP3O43295 1099 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 AMOTQ4VCS5 1084 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 MAP3K5Q99683 1374 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 SDSP20132 328 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 FOXD4L5Q5VV16 416 aaPredicted RBP11.55□□□□□ -0.56
COX4I1-217ENST00000569997 TTC5Q8N0Z6 440 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 FOXD4L4Q8WXT5 416 aaPredicted RBP11.55□□□□□ -0.56
COX4I1-217ENST00000569997 SNX21Q969T3 373 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 PTCH1Q13635 1447 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 CPS1P31327 1500 aa11.55□□□□□ -0.56
COX4I1-217ENST00000569997 IFIT2P09913 472 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 271.5 ms