RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 IL13P35225 146 aa17.24■□□□□ 0.35
CDT1-203ENST00000569140 SULT6B1Q6IMI4 303 aa17.24■□□□□ 0.35
CDT1-203ENST00000569140 DEFB132Q7Z7B7 95 aa17.24■□□□□ 0.35
CDT1-203ENST00000569140 ACSBG1Q96GR2 724 aa17.24■□□□□ 0.35
CDT1-203ENST00000569140 TNS1Q9HBL0 1735 aaKnown RBP17.24■□□□□ 0.35
CDT1-203ENST00000569140 PCDH11XQ9BZA7 1347 aa17.23■□□□□ 0.35
CDT1-203ENST00000569140 PCDH11YQ9BZA8 1340 aa17.23■□□□□ 0.35
CDT1-203ENST00000569140 APBA3O96018 575 aa17.23■□□□□ 0.35
CDT1-203ENST00000569140 SPG7Q9UQ90 795 aa17.23■□□□□ 0.35
CDT1-203ENST00000569140 SHANK3Q9BYB0 1731 aa17.23■□□□□ 0.35
CDT1-203ENST00000569140 PARD3Q8TEW0 1356 aa17.23■□□□□ 0.35
CDT1-203ENST00000569140 NCAPD2Q15021 1401 aa17.22■□□□□ 0.35
CDT1-203ENST00000569140 AEBP1Q8IUX7 1158 aa17.22■□□□□ 0.35
CDT1-203ENST00000569140 HMOX1P09601 288 aa17.21■□□□□ 0.35
CDT1-203ENST00000569140 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
CDT1-203ENST00000569140 SBF2Q86WG5 1849 aa17.21■□□□□ 0.35
CDT1-203ENST00000569140 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
CDT1-203ENST00000569140 EN1Q05925 392 aaPredicted RBP17.2■□□□□ 0.34
CDT1-203ENST00000569140 RALBP1Q15311 655 aa17.2■□□□□ 0.34
CDT1-203ENST00000569140 PKD1L3Q7Z443 1732 aa17.2■□□□□ 0.34
CDT1-203ENST00000569140 DOT1LQ8TEK3 1739 aa17.19■□□□□ 0.34
CDT1-203ENST00000569140 NHSQ6T4R5 1651 aa17.18■□□□□ 0.34
CDT1-203ENST00000569140 BCL11BQ9C0K0 894 aaPredicted RBP17.18■□□□□ 0.34
CDT1-203ENST00000569140 NUDCQ9Y266 331 aa17.18■□□□□ 0.34
CDT1-203ENST00000569140 BCL9O00512 1426 aa17.18■□□□□ 0.34
CDT1-203ENST00000569140 KCNQ2O43526 872 aa17.17■□□□□ 0.34
CDT1-203ENST00000569140 PLEKHO1Q53GL0 409 aaPredicted RBP17.17■□□□□ 0.34
CDT1-203ENST00000569140 PTF1AQ7RTS3 328 aa17.17■□□□□ 0.34
CDT1-203ENST00000569140 CYP27B1O15528 508 aa17.16■□□□□ 0.34
CDT1-203ENST00000569140 EZH2Q15910 746 aaKnown RBP17.16■□□□□ 0.34
CDT1-203ENST00000569140 ZNF530Q6P9A1 599 aaPredicted RBP17.16■□□□□ 0.34
CDT1-203ENST00000569140 MYBBP1AQ9BQG0 1328 aaKnown RBP17.16■□□□□ 0.34
CDT1-203ENST00000569140 U2AF1L5P0DN76 240 aaPredicted RBP17.15■□□□□ 0.34
CDT1-203ENST00000569140 U2AF1Q01081 240 aaKnown RBP eCLIP17.15■□□□□ 0.34
CDT1-203ENST00000569140 KAT6BQ8WYB5 2073 aa17.15■□□□□ 0.34
CDT1-203ENST00000569140 KDRP35968 1356 aa17.15■□□□□ 0.34
CDT1-203ENST00000569140 PRIM1P49642 420 aaKnown RBP17.14■□□□□ 0.33
CDT1-203ENST00000569140 AMOTQ4VCS5 1084 aa17.14■□□□□ 0.33
CDT1-203ENST00000569140 C1orf141Q5JVX7 400 aa17.14■□□□□ 0.33
CDT1-203ENST00000569140 IFNL2Q8IZJ0 200 aa17.14■□□□□ 0.33
CDT1-203ENST00000569140 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.14■□□□□ 0.33
CDT1-203ENST00000569140 PHKG2P15735 406 aa17.13■□□□□ 0.33
CDT1-203ENST00000569140 BTAF1O14981 1849 aa17.12■□□□□ 0.33
CDT1-203ENST00000569140 PRKRIP1Q9H875 184 aaPredicted RBP17.11■□□□□ 0.33
CDT1-203ENST00000569140 PLEKHG2Q9H7P9 1386 aa17.11■□□□□ 0.33
CDT1-203ENST00000569140 PRKAR2BP31323 418 aa17.1■□□□□ 0.33
CDT1-203ENST00000569140 MPRIPQ6WCQ1 1025 aa17.1■□□□□ 0.33
CDT1-203ENST00000569140 CAMKK2Q96RR4 588 aa17.1■□□□□ 0.33
CDT1-203ENST00000569140 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
CDT1-203ENST00000569140 HSP90AB1P08238 724 aaKnown RBP17.09■□□□□ 0.33
CDT1-203ENST00000569140 ANP32CO43423 234 aa17.08■□□□□ 0.32
CDT1-203ENST00000569140 NEFMP07197 916 aa17.08■□□□□ 0.32
CDT1-203ENST00000569140 TMOD3Q9NYL9 352 aa17.08■□□□□ 0.32
CDT1-203ENST00000569140 RGPD3A6NKT7 1758 aaPredicted RBP17.07■□□□□ 0.32
CDT1-203ENST00000569140 RGPD4Q7Z3J3 1758 aa17.07■□□□□ 0.32
CDT1-203ENST00000569140 RREB1Q92766 1687 aa17.07■□□□□ 0.32
CDT1-203ENST00000569140 PLSCR1O15162 318 aa17.07■□□□□ 0.32
CDT1-203ENST00000569140 MTHFSDQ2M296 383 aaKnown RBP17.07■□□□□ 0.32
CDT1-203ENST00000569140 RSPH6AQ9H0K4 717 aa17.07■□□□□ 0.32
CDT1-203ENST00000569140 NUP188Q5SRE5 1749 aa17.07■□□□□ 0.32
CDT1-203ENST00000569140 ITGB4P16144 1822 aa17.06■□□□□ 0.32
CDT1-203ENST00000569140 NKX1-1Q15270 411 aaPredicted RBP17.06■□□□□ 0.32
CDT1-203ENST00000569140 AKAP4Q5JQC9 854 aa17.06■□□□□ 0.32
CDT1-203ENST00000569140 DCAF5Q96JK2 942 aa17.06■□□□□ 0.32
CDT1-203ENST00000569140 WDR43Q15061 677 aaKnown RBP eCLIP17.05■□□□□ 0.32
CDT1-203ENST00000569140 TXNRD1Q16881 649 aa17.05■□□□□ 0.32
CDT1-203ENST00000569140 GAS2L2Q8NHY3 880 aa17.05■□□□□ 0.32
CDT1-203ENST00000569140 KDM6AO15550 1401 aaPredicted RBP17.04■□□□□ 0.32
CDT1-203ENST00000569140 PSDA5PKW4 1024 aaPredicted RBP17.04■□□□□ 0.32
CDT1-203ENST00000569140 FCHSD2O94868 740 aa17.04■□□□□ 0.32
CDT1-203ENST00000569140 CABP4P57796 275 aa17.04■□□□□ 0.32
CDT1-203ENST00000569140 NBPF14Q5TI25 921 aa17.04■□□□□ 0.32
CDT1-203ENST00000569140 PIGBQ92521 554 aa17.03■□□□□ 0.32
CDT1-203ENST00000569140 MAPK8IP3Q9UPT6 1336 aa17.02■□□□□ 0.32
CDT1-203ENST00000569140 PHACTR3Q96KR7 559 aa17.02■□□□□ 0.32
CDT1-203ENST00000569140 PALLDQ8WX93 1383 aa17.02■□□□□ 0.31
CDT1-203ENST00000569140 MAP3K5Q99683 1374 aa17.02■□□□□ 0.31
CDT1-203ENST00000569140 ERVV-2B6SEH9 535 aa17.01■□□□□ 0.31
CDT1-203ENST00000569140 KCNQ4P56696 695 aa17.01■□□□□ 0.31
CDT1-203ENST00000569140 R3HDM1Q15032 1099 aaKnown RBP17.01■□□□□ 0.31
CDT1-203ENST00000569140 PNNQ9H307 717 aaKnown RBP17.01■□□□□ 0.31
CDT1-203ENST00000569140 CCNL1Q9UK58 526 aaPredicted RBP17.01■□□□□ 0.31
CDT1-203ENST00000569140 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
CDT1-203ENST00000569140 GNAT3A8MTJ3 354 aa17■□□□□ 0.31
CDT1-203ENST00000569140 PROM2Q8N271 834 aa17■□□□□ 0.31
CDT1-203ENST00000569140 SMARCC1Q92922 1105 aaPredicted RBP17■□□□□ 0.31
CDT1-203ENST00000569140 VIRMAQ69YN4 1812 aaKnown RBP16.99■□□□□ 0.31
CDT1-203ENST00000569140 RNMTO43148 476 aaKnown RBP16.99■□□□□ 0.31
CDT1-203ENST00000569140 LGR6Q9HBX8 967 aa16.99■□□□□ 0.31
CDT1-203ENST00000569140 STK32BQ9NY57 414 aa16.99■□□□□ 0.31
CDT1-203ENST00000569140 SLC27A3Q5K4L6 730 aa16.98■□□□□ 0.31
CDT1-203ENST00000569140 CCDC146Q8IYE0 955 aa16.98■□□□□ 0.31
CDT1-203ENST00000569140 NFATC2IPQ8NCF5 419 aa16.98■□□□□ 0.31
CDT1-203ENST00000569140 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
CDT1-203ENST00000569140 ASAP1Q9ULH1 1129 aa16.98■□□□□ 0.31
CDT1-203ENST00000569140 LY75O60449 1722 aa16.98■□□□□ 0.31
CDT1-203ENST00000569140 RBM42Q9BTD8 480 aaKnown RBP16.97■□□□□ 0.31
CDT1-203ENST00000569140 ANO8Q9HCE9 1232 aaPredicted RBP16.97■□□□□ 0.31
CDT1-203ENST00000569140 TEFQ10587 303 aa16.96■□□□□ 0.31
CDT1-203ENST00000569140 SLC52A2Q9HAB3 445 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 153.8 ms