RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 POLKQ9UBT6 870 aa27.7■■■□□ 2.02
ABCA3-206ENST00000569062 BTAF1O14981 1849 aa27.69■■■□□ 2.02
ABCA3-206ENST00000569062 WASHC2AQ641Q2 1341 aa27.68■■■□□ 2.02
ABCA3-206ENST00000569062 PROM2Q8N271 834 aa27.68■■■□□ 2.02
ABCA3-206ENST00000569062 ZCRB1Q8TBF4 217 aaKnown RBP27.68■■■□□ 2.02
ABCA3-206ENST00000569062 NBPF14Q5TI25 921 aa27.67■■■□□ 2.02
ABCA3-206ENST00000569062 LRP5O75197 1615 aa27.67■■■□□ 2.02
ABCA3-206ENST00000569062 DOT1LQ8TEK3 1739 aa27.66■■■□□ 2.02
ABCA3-206ENST00000569062 NSD2O96028 1365 aa27.65■■■□□ 2.02
ABCA3-206ENST00000569062 RAPGEF4Q8WZA2 1011 aa27.65■■■□□ 2.02
ABCA3-206ENST00000569062 TATP17735 454 aaPredicted RBP27.63■■■□□ 2.01
ABCA3-206ENST00000569062 KNSTRNQ9Y448 316 aa27.63■■■□□ 2.01
ABCA3-206ENST00000569062 TXNRD1Q16881 649 aa27.62■■■□□ 2.01
ABCA3-206ENST00000569062 NCAPD2Q15021 1401 aa27.61■■■□□ 2.01
ABCA3-206ENST00000569062 MORC1Q86VD1 984 aa27.6■■■□□ 2.01
ABCA3-206ENST00000569062 ANO8Q9HCE9 1232 aaPredicted RBP27.6■■■□□ 2.01
ABCA3-206ENST00000569062 EYA1Q99502 592 aa27.59■■■□□ 2.01
ABCA3-206ENST00000569062 PKD1L3Q7Z443 1732 aa27.58■■■□□ 2.01
ABCA3-206ENST00000569062 EIF4A2Q14240 407 aaKnown RBP27.57■■■□□ 2
ABCA3-206ENST00000569062 AMER1Q5JTC6 1135 aaPredicted RBP27.57■■■□□ 2
ABCA3-206ENST00000569062 PRIM1P49642 420 aaKnown RBP27.56■■■□□ 2
ABCA3-206ENST00000569062 SYTL4Q96C24 671 aaPredicted RBP27.56■■■□□ 2
ABCA3-206ENST00000569062 PER1O15534 1290 aaPredicted RBP27.54■■■□□ 2
ABCA3-206ENST00000569062 PCDH11XQ9BZA7 1347 aa27.54■■■□□ 2
ABCA3-206ENST00000569062 PCDH11YQ9BZA8 1340 aa27.54■■■□□ 2
ABCA3-206ENST00000569062 CASZ1Q86V15 1759 aa27.51■■□□□ 1.99
ABCA3-206ENST00000569062 CYP27B1O15528 508 aa27.51■■□□□ 1.99
ABCA3-206ENST00000569062 PAPPAQ13219 1627 aa27.51■■□□□ 1.99
ABCA3-206ENST00000569062 TOGARAM1Q9Y4F4 1720 aa27.5■■□□□ 1.99
ABCA3-206ENST00000569062 LY75O60449 1722 aa27.5■■□□□ 1.99
ABCA3-206ENST00000569062 LRRC4BQ9NT99 713 aa27.49■■□□□ 1.99
ABCA3-206ENST00000569062 SLC15A2Q16348 729 aa27.48■■□□□ 1.99
ABCA3-206ENST00000569062 PDGFDQ9GZP0 370 aaPredicted RBP27.48■■□□□ 1.99
ABCA3-206ENST00000569062 STK32BQ9NY57 414 aa27.48■■□□□ 1.99
ABCA3-206ENST00000569062 ITGB4P16144 1822 aa27.48■■□□□ 1.99
ABCA3-206ENST00000569062 IGSF1Q8N6C5 1336 aa27.47■■□□□ 1.99
ABCA3-206ENST00000569062 CC2D1BQ5T0F9 858 aaKnown RBP27.46■■□□□ 1.99
ABCA3-206ENST00000569062 SPG7Q9UQ90 795 aa27.46■■□□□ 1.99
ABCA3-206ENST00000569062 KCNQ4P56696 695 aa27.43■■□□□ 1.98
ABCA3-206ENST00000569062 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.43■■□□□ 1.98
ABCA3-206ENST00000569062 SLC27A3Q5K4L6 730 aa27.42■■□□□ 1.98
ABCA3-206ENST00000569062 ZNF827Q17R98 1081 aa27.41■■□□□ 1.98
ABCA3-206ENST00000569062 CNGB1Q14028 1251 aaPredicted RBP27.4■■□□□ 1.98
ABCA3-206ENST00000569062 NKX1-1Q15270 411 aaPredicted RBP27.4■■□□□ 1.98
ABCA3-206ENST00000569062 MPRIPQ6WCQ1 1025 aa27.4■■□□□ 1.98
ABCA3-206ENST00000569062 SPON1Q9HCB6 807 aa27.4■■□□□ 1.98
ABCA3-206ENST00000569062 MTHFSP49914 203 aa27.39■■□□□ 1.98
ABCA3-206ENST00000569062 PHKG2P15735 406 aa27.38■■□□□ 1.97
ABCA3-206ENST00000569062 IL13P35225 146 aa27.38■■□□□ 1.97
ABCA3-206ENST00000569062 AEBP1Q8IUX7 1158 aa27.38■■□□□ 1.97
ABCA3-206ENST00000569062 NPC1L1Q9UHC9 1359 aa27.37■■□□□ 1.97
ABCA3-206ENST00000569062 ZBTB7AO95365 584 aa27.37■■□□□ 1.97
ABCA3-206ENST00000569062 IFNL2Q8IZJ0 200 aa27.37■■□□□ 1.97
ABCA3-206ENST00000569062 TUBGCP6Q96RT7 1819 aa27.37■■□□□ 1.97
ABCA3-206ENST00000569062 PLEKHG2Q9H7P9 1386 aa27.36■■□□□ 1.97
ABCA3-206ENST00000569062 AKT1S1Q96B36 256 aa27.36■■□□□ 1.97
ABCA3-206ENST00000569062 CCNL1Q9UK58 526 aaPredicted RBP27.35■■□□□ 1.97
ABCA3-206ENST00000569062 QSER1Q2KHR3 1735 aa27.35■■□□□ 1.97
ABCA3-206ENST00000569062 SULT6B1Q6IMI4 303 aa27.34■■□□□ 1.97
ABCA3-206ENST00000569062 PIGBQ92521 554 aa27.33■■□□□ 1.97
ABCA3-206ENST00000569062 PALLDQ8WX93 1383 aa27.33■■□□□ 1.97
ABCA3-206ENST00000569062 PLEKHO1Q53GL0 409 aaPredicted RBP27.32■■□□□ 1.96
ABCA3-206ENST00000569062 ATF5Q9Y2D1 282 aaPredicted RBP27.32■■□□□ 1.96
ABCA3-206ENST00000569062 C5P01031 1676 aa27.32■■□□□ 1.96
ABCA3-206ENST00000569062 KDRP35968 1356 aa27.32■■□□□ 1.96
ABCA3-206ENST00000569062 TAF1LQ8IZX4 1826 aa27.32■■□□□ 1.96
ABCA3-206ENST00000569062 PPP1R1BQ9UD71 204 aaPredicted RBP27.3■■□□□ 1.96
ABCA3-206ENST00000569062 PTGER2P43116 358 aa27.28■■□□□ 1.96
ABCA3-206ENST00000569062 AMOTQ4VCS5 1084 aa27.28■■□□□ 1.96
ABCA3-206ENST00000569062 ZNF530Q6P9A1 599 aaPredicted RBP27.28■■□□□ 1.96
ABCA3-206ENST00000569062 TMOD3Q9NYL9 352 aa27.28■■□□□ 1.96
ABCA3-206ENST00000569062 PNPLA7Q6ZV29 1317 aa27.27■■□□□ 1.96
ABCA3-206ENST00000569062 MTFR1LQ9H019 292 aa27.27■■□□□ 1.96
ABCA3-206ENST00000569062 TFCP2L1Q9NZI6 479 aa27.27■■□□□ 1.96
ABCA3-206ENST00000569062 DIAPH1O60610 1272 aaKnown RBP27.26■■□□□ 1.95
ABCA3-206ENST00000569062 SMARCC1Q92922 1105 aaPredicted RBP27.26■■□□□ 1.95
ABCA3-206ENST00000569062 COL3A1P02461 1466 aaPredicted RBP27.25■■□□□ 1.95
ABCA3-206ENST00000569062 HMOX1P09601 288 aa27.25■■□□□ 1.95
ABCA3-206ENST00000569062 KDM6AO15550 1401 aaPredicted RBP27.24■■□□□ 1.95
ABCA3-206ENST00000569062 DCAF5Q96JK2 942 aa27.24■■□□□ 1.95
ABCA3-206ENST00000569062 ASAP1Q9ULH1 1129 aa27.24■■□□□ 1.95
ABCA3-206ENST00000569062 HSP90AB1P08238 724 aaKnown RBP27.23■■□□□ 1.95
ABCA3-206ENST00000569062 C4BP0C0L5 1744 aa27.22■■□□□ 1.95
ABCA3-206ENST00000569062 SGIP1Q9BQI5 828 aa27.22■■□□□ 1.95
ABCA3-206ENST00000569062 ERVV-2B6SEH9 535 aa27.21■■□□□ 1.95
ABCA3-206ENST00000569062 C1orf141Q5JVX7 400 aa27.21■■□□□ 1.95
ABCA3-206ENST00000569062 ATG3Q9NT62 314 aa27.2■■□□□ 1.94
ABCA3-206ENST00000569062 SCN11AQ9UI33 1791 aa27.2■■□□□ 1.94
ABCA3-206ENST00000569062 COL24A1Q17RW2 1714 aa27.19■■□□□ 1.94
ABCA3-206ENST00000569062 VIRMAQ69YN4 1812 aaKnown RBP27.19■■□□□ 1.94
ABCA3-206ENST00000569062 LOC102724428A0A0B4J2F2 783 aa27.18■■□□□ 1.94
ABCA3-206ENST00000569062 SIK1P57059 783 aa27.18■■□□□ 1.94
ABCA3-206ENST00000569062 SLC16A10Q8TF71 515 aa27.18■■□□□ 1.94
ABCA3-206ENST00000569062 CABP4P57796 275 aa27.16■■□□□ 1.94
ABCA3-206ENST00000569062 COL23A1Q86Y22 540 aaPredicted RBP27.16■■□□□ 1.94
ABCA3-206ENST00000569062 UBR3Q6ZT12 1888 aa27.15■■□□□ 1.94
ABCA3-206ENST00000569062 U2SURPO15042 1029 aaKnown RBP27.15■■□□□ 1.94
ABCA3-206ENST00000569062 MSH5O43196 834 aa27.14■■□□□ 1.94
ABCA3-206ENST00000569062 PPP2R1AP30153 589 aa27.14■■□□□ 1.94
ABCA3-206ENST00000569062 ITPK1Q13572 414 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms