RNA–Protein interactions for RNA: ENST00000568968.1

CARHSP1-212, Transcript of calcium regulated heat stable protein 1, humanhuman

TSL 2

Gene CARHSP1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARHSP1-212ENST00000568968 USP47Q96K76 1375 aa20.33■□□□□ 0.84
CARHSP1-212ENST00000568968 MAP3K5Q99683 1374 aa20.33■□□□□ 0.84
CARHSP1-212ENST00000568968 TMF1P82094 1093 aa20.32■□□□□ 0.84
CARHSP1-212ENST00000568968 RRS1Q15050 365 aaKnown RBP20.32■□□□□ 0.84
CARHSP1-212ENST00000568968 ZCRB1Q8TBF4 217 aaKnown RBP20.32■□□□□ 0.84
CARHSP1-212ENST00000568968 SYTL4Q96C24 671 aaPredicted RBP20.32■□□□□ 0.84
CARHSP1-212ENST00000568968 GGNBP2Q9H3C7 697 aa20.32■□□□□ 0.84
CARHSP1-212ENST00000568968 NBPF6Q5VWK0 638 aa20.31■□□□□ 0.84
CARHSP1-212ENST00000568968 NBPF4Q96M43 638 aa20.31■□□□□ 0.84
CARHSP1-212ENST00000568968 LY75O60449 1722 aa20.3■□□□□ 0.84
CARHSP1-212ENST00000568968 PNPLA7Q6ZV29 1317 aa20.3■□□□□ 0.84
CARHSP1-212ENST00000568968 KCNQ4P56696 695 aa20.3■□□□□ 0.84
CARHSP1-212ENST00000568968 TUBGCP6Q96RT7 1819 aa20.3■□□□□ 0.84
CARHSP1-212ENST00000568968 SLC16A10Q8TF71 515 aa20.29■□□□□ 0.84
CARHSP1-212ENST00000568968 COL24A1Q17RW2 1714 aa20.29■□□□□ 0.84
CARHSP1-212ENST00000568968 USHBP1Q8N6Y0 703 aa20.28■□□□□ 0.84
CARHSP1-212ENST00000568968 SMG6Q86US8 1419 aaKnown RBP20.27■□□□□ 0.84
CARHSP1-212ENST00000568968 KIF20BQ96Q89 1820 aa20.27■□□□□ 0.84
CARHSP1-212ENST00000568968 CGNL1Q0VF96 1302 aa20.27■□□□□ 0.83
CARHSP1-212ENST00000568968 TFCP2L1Q9NZI6 479 aa20.26■□□□□ 0.83
CARHSP1-212ENST00000568968 GOLGB1Q14789 3259 aaKnown RBP20.26■□□□□ 0.83
CARHSP1-212ENST00000568968 INSRP06213 1382 aa20.25■□□□□ 0.83
CARHSP1-212ENST00000568968 ZNF784Q8NCA9 323 aaPredicted RBP20.25■□□□□ 0.83
CARHSP1-212ENST00000568968 RAPGEF4Q8WZA2 1011 aa20.25■□□□□ 0.83
CARHSP1-212ENST00000568968 CHD4Q14839 1912 aa20.25■□□□□ 0.83
CARHSP1-212ENST00000568968 FLT4P35916 1363 aa20.24■□□□□ 0.83
CARHSP1-212ENST00000568968 KIF24Q5T7B8 1368 aa20.24■□□□□ 0.83
CARHSP1-212ENST00000568968 CDCA8Q53HL2 280 aa20.24■□□□□ 0.83
CARHSP1-212ENST00000568968 HSP90AB2PQ58FF8 381 aa20.24■□□□□ 0.83
CARHSP1-212ENST00000568968 CCNL1Q9UK58 526 aaPredicted RBP20.24■□□□□ 0.83
CARHSP1-212ENST00000568968 POLD1P28340 1107 aa20.23■□□□□ 0.83
CARHSP1-212ENST00000568968 TATP17735 454 aaPredicted RBP20.22■□□□□ 0.83
CARHSP1-212ENST00000568968 TRIM26Q12899 539 aaPredicted RBP20.22■□□□□ 0.83
CARHSP1-212ENST00000568968 CARD14Q9BXL6 1004 aa20.21■□□□□ 0.83
CARHSP1-212ENST00000568968 PCDH11XQ9BZA7 1347 aa20.21■□□□□ 0.83
CARHSP1-212ENST00000568968 PCDH11YQ9BZA8 1340 aa20.21■□□□□ 0.83
CARHSP1-212ENST00000568968 KLHL34Q8N239 644 aa20.2■□□□□ 0.82
CARHSP1-212ENST00000568968 NSD3Q9BZ95 1437 aa20.19■□□□□ 0.82
CARHSP1-212ENST00000568968 EMILIN1Q9Y6C2 1016 aa20.18■□□□□ 0.82
CARHSP1-212ENST00000568968 C5P01031 1676 aa20.17■□□□□ 0.82
CARHSP1-212ENST00000568968 CYP27B1O15528 508 aa20.17■□□□□ 0.82
CARHSP1-212ENST00000568968 GPR162Q16538 588 aa20.17■□□□□ 0.82
CARHSP1-212ENST00000568968 COL23A1Q86Y22 540 aaPredicted RBP20.17■□□□□ 0.82
CARHSP1-212ENST00000568968 PKD1L3Q7Z443 1732 aa20.16■□□□□ 0.82
CARHSP1-212ENST00000568968 TOGARAM1Q9Y4F4 1720 aa20.16■□□□□ 0.82
CARHSP1-212ENST00000568968 NLGN2Q8NFZ4 835 aa20.16■□□□□ 0.82
CARHSP1-212ENST00000568968 NCAPD2Q15021 1401 aa20.16■□□□□ 0.82
CARHSP1-212ENST00000568968 ANKRD26Q9UPS8 1709 aa20.16■□□□□ 0.82
CARHSP1-212ENST00000568968 PALLDQ8WX93 1383 aa20.15■□□□□ 0.82
CARHSP1-212ENST00000568968 TAF1LQ8IZX4 1826 aa20.14■□□□□ 0.81
CARHSP1-212ENST00000568968 MSH5O43196 834 aa20.14■□□□□ 0.81
CARHSP1-212ENST00000568968 MPRIPQ6WCQ1 1025 aa20.14■□□□□ 0.81
CARHSP1-212ENST00000568968 ITGB4P16144 1822 aa20.13■□□□□ 0.81
CARHSP1-212ENST00000568968 PELP1Q8IZL8 1130 aaKnown RBP20.12■□□□□ 0.81
CARHSP1-212ENST00000568968 TIMELESSQ9UNS1 1208 aa20.12■□□□□ 0.81
CARHSP1-212ENST00000568968 WASHC2AQ641Q2 1341 aa20.11■□□□□ 0.81
CARHSP1-212ENST00000568968 PPM1GO15355 546 aaPredicted RBP20.11■□□□□ 0.81
CARHSP1-212ENST00000568968 MSL1Q68DK7 614 aa20.11■□□□□ 0.81
CARHSP1-212ENST00000568968 C4BP0C0L5 1744 aa20.1■□□□□ 0.81
CARHSP1-212ENST00000568968 HMGB2P26583 209 aaKnown RBP20.09■□□□□ 0.81
CARHSP1-212ENST00000568968 NKX1-1Q15270 411 aaPredicted RBP20.09■□□□□ 0.81
CARHSP1-212ENST00000568968 FLAD1Q8NFF5 587 aa20.09■□□□□ 0.81
CARHSP1-212ENST00000568968 SMARCC1Q92922 1105 aaPredicted RBP20.09■□□□□ 0.81
CARHSP1-212ENST00000568968 MAP2P11137 1827 aaKnown RBP20.09■□□□□ 0.81
CARHSP1-212ENST00000568968 PIGBQ92521 554 aa20.08■□□□□ 0.81
CARHSP1-212ENST00000568968 EYA1Q99502 592 aa20.08■□□□□ 0.81
CARHSP1-212ENST00000568968 SPG7Q9UQ90 795 aa20.08■□□□□ 0.81
CARHSP1-212ENST00000568968 YBX3P16989 372 aaKnown RBP eCLIP20.07■□□□□ 0.81e-7■□□□□ 10.8
CARHSP1-212ENST00000568968 AMIGO3Q86WK7 504 aa20.07■□□□□ 0.8
CARHSP1-212ENST00000568968 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.06■□□□□ 0.8
CARHSP1-212ENST00000568968 POLKQ9UBT6 870 aa20.06■□□□□ 0.8
CARHSP1-212ENST00000568968 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
CARHSP1-212ENST00000568968 C1QTNF8P60827 252 aa20.05■□□□□ 0.8
CARHSP1-212ENST00000568968 AK7Q96M32 723 aa20.05■□□□□ 0.8
CARHSP1-212ENST00000568968 GRIN3BO60391 1043 aa20.04■□□□□ 0.8
CARHSP1-212ENST00000568968 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
CARHSP1-212ENST00000568968 CD2APQ9Y5K6 639 aa20.03■□□□□ 0.8
CARHSP1-212ENST00000568968 LOC102724428A0A0B4J2F2 783 aa20.02■□□□□ 0.8
CARHSP1-212ENST00000568968 SIK1P57059 783 aa20.02■□□□□ 0.8
CARHSP1-212ENST00000568968 TMOD3Q9NYL9 352 aa20.02■□□□□ 0.8
CARHSP1-212ENST00000568968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.01■□□□□ 0.79
CARHSP1-212ENST00000568968 PHF14O94880 888 aa20.01■□□□□ 0.79
CARHSP1-212ENST00000568968 PHKG2P15735 406 aa20.01■□□□□ 0.79
CARHSP1-212ENST00000568968 EIF4A2Q14240 407 aaKnown RBP20.01■□□□□ 0.79
CARHSP1-212ENST00000568968 SMIM5Q71RC9 77 aa20.01■□□□□ 0.79
CARHSP1-212ENST00000568968 LINC00116Q8NCU8 138 aa20.01■□□□□ 0.79
CARHSP1-212ENST00000568968 SENP3-EIF4A1A0A087X0R7 540 aa20■□□□□ 0.79
CARHSP1-212ENST00000568968 TNNT2P45379 298 aaPredicted RBP20■□□□□ 0.79
CARHSP1-212ENST00000568968 IFNL2Q8IZJ0 200 aa20■□□□□ 0.79
CARHSP1-212ENST00000568968 POLR3GLQ9BT43 218 aa20■□□□□ 0.79
CARHSP1-212ENST00000568968 ASAP1Q9ULH1 1129 aa20■□□□□ 0.79
CARHSP1-212ENST00000568968 PLEKHG2Q9H7P9 1386 aa19.99■□□□□ 0.79
CARHSP1-212ENST00000568968 GIGYF1O75420 1035 aaPredicted RBP19.99■□□□□ 0.79
CARHSP1-212ENST00000568968 SSFA2P28290 1259 aa19.99■□□□□ 0.79
CARHSP1-212ENST00000568968 ITPK1Q13572 414 aa19.98■□□□□ 0.79
CARHSP1-212ENST00000568968 CEP350Q5VT06 3117 aa19.98■□□□□ 0.79
CARHSP1-212ENST00000568968 IGSF1Q8N6C5 1336 aa19.98■□□□□ 0.79
CARHSP1-212ENST00000568968 PCGF6Q9BYE7 350 aa19.97■□□□□ 0.79
CARHSP1-212ENST00000568968 ATG3Q9NT62 314 aa19.97■□□□□ 0.79
CARHSP1-212ENST00000568968 GNPATO15228 680 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms