RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 SYTL4Q96C24 671 aaPredicted RBP17.74■□□□□ 0.43
SNX29-207ENST00000568949 DOT1LQ8TEK3 1739 aa17.73■□□□□ 0.43
SNX29-207ENST00000568949 PUS7Q96PZ0 661 aaKnown RBP17.73■□□□□ 0.43
SNX29-207ENST00000568949 NSD2O96028 1365 aa17.73■□□□□ 0.43
SNX29-207ENST00000568949 A0A1W2PP64 1363 aa17.72■□□□□ 0.43
SNX29-207ENST00000568949 YBX3P16989 372 aaKnown RBP eCLIP17.72■□□□□ 0.43
SNX29-207ENST00000568949 LTV1Q96GA3 475 aaPredicted RBP17.72■□□□□ 0.43
SNX29-207ENST00000568949 CCNL1Q9UK58 526 aaPredicted RBP17.72■□□□□ 0.43
SNX29-207ENST00000568949 ZCRB1Q8TBF4 217 aaKnown RBP17.71■□□□□ 0.43
SNX29-207ENST00000568949 NEUROD1Q13562 356 aa17.7■□□□□ 0.42
SNX29-207ENST00000568949 COL23A1Q86Y22 540 aaPredicted RBP17.7■□□□□ 0.42
SNX29-207ENST00000568949 CARD11Q9BXL7 1154 aa17.7■□□□□ 0.42
SNX29-207ENST00000568949 MSH5O43196 834 aa17.69■□□□□ 0.42
SNX29-207ENST00000568949 HMGB2P26583 209 aaKnown RBP17.69■□□□□ 0.42
SNX29-207ENST00000568949 MAP3K19Q56UN5 1328 aa17.69■□□□□ 0.42
SNX29-207ENST00000568949 USP47Q96K76 1375 aa17.68■□□□□ 0.42
SNX29-207ENST00000568949 HOXC9P31274 260 aa17.68■□□□□ 0.42
SNX29-207ENST00000568949 ATP10DQ9P241 1426 aa17.67■□□□□ 0.42
SNX29-207ENST00000568949 COG3Q96JB2 828 aa17.67■□□□□ 0.42
SNX29-207ENST00000568949 CD2APQ9Y5K6 639 aa17.67■□□□□ 0.42
SNX29-207ENST00000568949 MEGF6O75095 1541 aa17.67■□□□□ 0.42
SNX29-207ENST00000568949 RGPD2P0DJD1 1756 aa17.66■□□□□ 0.42
SNX29-207ENST00000568949 AMPHP49418 695 aa17.66■□□□□ 0.42
SNX29-207ENST00000568949 CGNL1Q0VF96 1302 aa17.66■□□□□ 0.42
SNX29-207ENST00000568949 FLAD1Q8NFF5 587 aa17.65■□□□□ 0.42
SNX29-207ENST00000568949 MSL1Q68DK7 614 aa17.64■□□□□ 0.41
SNX29-207ENST00000568949 RTL1A6NKG5 1358 aa17.64■□□□□ 0.41
SNX29-207ENST00000568949 GPBP1L1Q9HC44 474 aaPredicted RBP17.63■□□□□ 0.41
SNX29-207ENST00000568949 C5P01031 1676 aa17.63■□□□□ 0.41
SNX29-207ENST00000568949 GOLGB1Q14789 3259 aaKnown RBP17.62■□□□□ 0.41
SNX29-207ENST00000568949 ADCY9O60503 1353 aa17.62■□□□□ 0.41
SNX29-207ENST00000568949 FBLN1P23142 703 aa17.61■□□□□ 0.41
SNX29-207ENST00000568949 NBPF6Q5VWK0 638 aa17.61■□□□□ 0.41
SNX29-207ENST00000568949 RAPGEF4Q8WZA2 1011 aa17.61■□□□□ 0.41
SNX29-207ENST00000568949 NBPF4Q96M43 638 aa17.61■□□□□ 0.41
SNX29-207ENST00000568949 TAF1LQ8IZX4 1826 aa17.61■□□□□ 0.41
SNX29-207ENST00000568949 HSPA6P17066 643 aa17.6■□□□□ 0.41
SNX29-207ENST00000568949 PALLDQ8WX93 1383 aa17.59■□□□□ 0.41
SNX29-207ENST00000568949 SLC24A1O60721 1099 aa17.59■□□□□ 0.41
SNX29-207ENST00000568949 CEP350Q5VT06 3117 aa17.59■□□□□ 0.41
SNX29-207ENST00000568949 SMG6Q86US8 1419 aaKnown RBP17.58■□□□□ 0.41
SNX29-207ENST00000568949 PCDH11XQ9BZA7 1347 aa17.58■□□□□ 0.4
SNX29-207ENST00000568949 PCDH11YQ9BZA8 1340 aa17.58■□□□□ 0.4
SNX29-207ENST00000568949 TATP17735 454 aaPredicted RBP17.58■□□□□ 0.4
SNX29-207ENST00000568949 TESK2Q96S53 571 aa17.57■□□□□ 0.4
SNX29-207ENST00000568949 RRS1Q15050 365 aaKnown RBP17.56■□□□□ 0.4
SNX29-207ENST00000568949 USHBP1Q8N6Y0 703 aa17.56■□□□□ 0.4
SNX29-207ENST00000568949 SMARCC1Q92922 1105 aaPredicted RBP17.56■□□□□ 0.4
SNX29-207ENST00000568949 NSD3Q9BZ95 1437 aa17.55■□□□□ 0.4
SNX29-207ENST00000568949 C4BP0C0L5 1744 aa17.55■□□□□ 0.4
SNX29-207ENST00000568949 AK7Q96M32 723 aa17.55■□□□□ 0.4
SNX29-207ENST00000568949 FYB1O15117 783 aa17.54■□□□□ 0.4
SNX29-207ENST00000568949 MPRIPQ6WCQ1 1025 aa17.54■□□□□ 0.4
SNX29-207ENST00000568949 ZNF526Q8TF50 670 aaPredicted RBP17.54■□□□□ 0.4
SNX29-207ENST00000568949 INSRP06213 1382 aa17.53■□□□□ 0.4
SNX29-207ENST00000568949 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
SNX29-207ENST00000568949 UBR3Q6ZT12 1888 aa17.53■□□□□ 0.4
SNX29-207ENST00000568949 ITGB4P16144 1822 aa17.53■□□□□ 0.4
SNX29-207ENST00000568949 KIF24Q5T7B8 1368 aa17.53■□□□□ 0.4
SNX29-207ENST00000568949 TOGARAM1Q9Y4F4 1720 aa17.52■□□□□ 0.4
SNX29-207ENST00000568949 ST20-MTHFSA0A0A6YYL1 179 aa17.52■□□□□ 0.4
SNX29-207ENST00000568949 CYP27B1O15528 508 aa17.52■□□□□ 0.4
SNX29-207ENST00000568949 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.51■□□□□ 0.39
SNX29-207ENST00000568949 SSFA2P28290 1259 aa17.51■□□□□ 0.39
SNX29-207ENST00000568949 HSP90AB2PQ58FF8 381 aa17.51■□□□□ 0.39
SNX29-207ENST00000568949 AMIGO3Q86WK7 504 aa17.51■□□□□ 0.39
SNX29-207ENST00000568949 GGNBP2Q9H3C7 697 aa17.51■□□□□ 0.39
SNX29-207ENST00000568949 TONSLQ96HA7 1378 aa17.51■□□□□ 0.39
SNX29-207ENST00000568949 KIF3CO14782 793 aa17.5■□□□□ 0.39
SNX29-207ENST00000568949 FLT4P35916 1363 aa17.5■□□□□ 0.39
SNX29-207ENST00000568949 PHF14O94880 888 aa17.49■□□□□ 0.39
SNX29-207ENST00000568949 NKX1-1Q15270 411 aaPredicted RBP17.49■□□□□ 0.39
SNX29-207ENST00000568949 PIGBQ92521 554 aa17.49■□□□□ 0.39
SNX29-207ENST00000568949 MAP2P11137 1827 aaKnown RBP17.49■□□□□ 0.39
SNX29-207ENST00000568949 CICQ96RK0 1608 aaPredicted RBP17.48■□□□□ 0.39
SNX29-207ENST00000568949 PKD1L3Q7Z443 1732 aa17.48■□□□□ 0.39
SNX29-207ENST00000568949 LOC102724428A0A0B4J2F2 783 aa17.47■□□□□ 0.39
SNX29-207ENST00000568949 SIK1P57059 783 aa17.47■□□□□ 0.39
SNX29-207ENST00000568949 SMIM5Q71RC9 77 aa17.46■□□□□ 0.39
SNX29-207ENST00000568949 WWC3Q9ULE0 1092 aa17.46■□□□□ 0.39
SNX29-207ENST00000568949 NCAPD2Q15021 1401 aa17.46■□□□□ 0.39
SNX29-207ENST00000568949 KIF20BQ96Q89 1820 aa17.45■□□□□ 0.38
SNX29-207ENST00000568949 APLP1P51693 650 aa17.45■□□□□ 0.38
SNX29-207ENST00000568949 LINC00116Q8NCU8 138 aa17.45■□□□□ 0.38
SNX29-207ENST00000568949 SPG7Q9UQ90 795 aa17.45■□□□□ 0.38
SNX29-207ENST00000568949 TMF1P82094 1093 aa17.44■□□□□ 0.38
SNX29-207ENST00000568949 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
SNX29-207ENST00000568949 GNPATO15228 680 aa17.43■□□□□ 0.38
SNX29-207ENST00000568949 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNX29-207ENST00000568949 TOMM70O94826 608 aa17.42■□□□□ 0.38
SNX29-207ENST00000568949 MMP10P09238 476 aa17.42■□□□□ 0.38
SNX29-207ENST00000568949 TGFB2P61812 414 aa17.42■□□□□ 0.38
SNX29-207ENST00000568949 TMOD3Q9NYL9 352 aa17.42■□□□□ 0.38
SNX29-207ENST00000568949 PXDNLA1KZ92 1463 aa17.42■□□□□ 0.38
SNX29-207ENST00000568949 ITPK1Q13572 414 aa17.41■□□□□ 0.38
SNX29-207ENST00000568949 ASAP1Q9ULH1 1129 aa17.41■□□□□ 0.38
SNX29-207ENST00000568949 ATP6V1AP38606 617 aa17.4■□□□□ 0.38
SNX29-207ENST00000568949 CDCA8Q53HL2 280 aa17.4■□□□□ 0.38
SNX29-207ENST00000568949 DNAJC5GQ8N7S2 189 aa17.4■□□□□ 0.38
SNX29-207ENST00000568949 EMILIN1Q9Y6C2 1016 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms