RNA–Protein interactions for RNA: ENST00000567806.1

GTF3C1-207, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 4

Gene GTF3C1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-207ENST00000567806 SGIP1Q9BQI5 828 aa26.19■■□□□ 1.78
GTF3C1-207ENST00000567806 SMG6Q86US8 1419 aaKnown RBP26.19■■□□□ 1.78
GTF3C1-207ENST00000567806 CGNL1Q0VF96 1302 aa26.18■■□□□ 1.78
GTF3C1-207ENST00000567806 USHBP1Q8N6Y0 703 aa26.18■■□□□ 1.78
GTF3C1-207ENST00000567806 AKT1S1Q96B36 256 aa26.18■■□□□ 1.78
GTF3C1-207ENST00000567806 TATP17735 454 aaPredicted RBP26.17■■□□□ 1.78
GTF3C1-207ENST00000567806 TIMELESSQ9UNS1 1208 aa26.17■■□□□ 1.78
GTF3C1-207ENST00000567806 MYOM1P52179 1685 aa26.16■■□□□ 1.78
GTF3C1-207ENST00000567806 HSP90AB2PQ58FF8 381 aa26.16■■□□□ 1.78
GTF3C1-207ENST00000567806 SLC16A10Q8TF71 515 aa26.16■■□□□ 1.78
GTF3C1-207ENST00000567806 TFCP2L1Q9NZI6 479 aa26.16■■□□□ 1.78
GTF3C1-207ENST00000567806 MEGF6O75095 1541 aa26.15■■□□□ 1.78
GTF3C1-207ENST00000567806 KCNQ4P56696 695 aa26.15■■□□□ 1.78
GTF3C1-207ENST00000567806 PAPPAQ13219 1627 aa26.14■■□□□ 1.78
GTF3C1-207ENST00000567806 CARD14Q9BXL6 1004 aa26.14■■□□□ 1.78
GTF3C1-207ENST00000567806 INSRP06213 1382 aa26.14■■□□□ 1.78
GTF3C1-207ENST00000567806 FLT4P35916 1363 aa26.12■■□□□ 1.77
GTF3C1-207ENST00000567806 CCNL1Q9UK58 526 aaPredicted RBP26.12■■□□□ 1.77
GTF3C1-207ENST00000567806 KIF24Q5T7B8 1368 aa26.11■■□□□ 1.77
GTF3C1-207ENST00000567806 RGPD2P0DJD1 1756 aa26.11■■□□□ 1.77
GTF3C1-207ENST00000567806 POLD1P28340 1107 aa26.11■■□□□ 1.77
GTF3C1-207ENST00000567806 NSD2O96028 1365 aa26.09■■□□□ 1.77
GTF3C1-207ENST00000567806 PCGF6Q9BYE7 350 aa26.09■■□□□ 1.77
GTF3C1-207ENST00000567806 PNPLA7Q6ZV29 1317 aa26.09■■□□□ 1.77
GTF3C1-207ENST00000567806 PPM1GO15355 546 aaPredicted RBP26.08■■□□□ 1.77
GTF3C1-207ENST00000567806 PCDH11XQ9BZA7 1347 aa26.08■■□□□ 1.77
GTF3C1-207ENST00000567806 PCDH11YQ9BZA8 1340 aa26.08■■□□□ 1.77
GTF3C1-207ENST00000567806 NSD3Q9BZ95 1437 aa26.07■■□□□ 1.76
GTF3C1-207ENST00000567806 EMILIN1Q9Y6C2 1016 aa26.07■■□□□ 1.76
GTF3C1-207ENST00000567806 MSH5O43196 834 aa26.06■■□□□ 1.76
GTF3C1-207ENST00000567806 HMGB2P26583 209 aaKnown RBP26.06■■□□□ 1.76
GTF3C1-207ENST00000567806 KLHL34Q8N239 644 aa26.06■■□□□ 1.76
GTF3C1-207ENST00000567806 DOT1LQ8TEK3 1739 aa26.05■■□□□ 1.76
GTF3C1-207ENST00000567806 CLSPNQ9HAW4 1339 aa26.05■■□□□ 1.76
GTF3C1-207ENST00000567806 MAP3K5Q99683 1374 aa26.05■■□□□ 1.76
GTF3C1-207ENST00000567806 POLR3GLQ9BT43 218 aa26.04■■□□□ 1.76
GTF3C1-207ENST00000567806 KIF20BQ96Q89 1820 aa26.03■■□□□ 1.76
GTF3C1-207ENST00000567806 MPRIPQ6WCQ1 1025 aa26.03■■□□□ 1.76
GTF3C1-207ENST00000567806 SHANK3Q9BYB0 1731 aa26.02■■□□□ 1.76
GTF3C1-207ENST00000567806 GPR162Q16538 588 aa26.02■■□□□ 1.76
GTF3C1-207ENST00000567806 CYP27B1O15528 508 aa26.01■■□□□ 1.75
GTF3C1-207ENST00000567806 WASHC2AQ641Q2 1341 aa25.99■■□□□ 1.75
GTF3C1-207ENST00000567806 COL23A1Q86Y22 540 aaPredicted RBP25.99■■□□□ 1.75
GTF3C1-207ENST00000567806 SPG7Q9UQ90 795 aa25.99■■□□□ 1.75
GTF3C1-207ENST00000567806 LY75O60449 1722 aa25.99■■□□□ 1.75
GTF3C1-207ENST00000567806 QSER1Q2KHR3 1735 aa25.98■■□□□ 1.75
GTF3C1-207ENST00000567806 SMARCC1Q92922 1105 aaPredicted RBP25.98■■□□□ 1.75
GTF3C1-207ENST00000567806 ZNF784Q8NCA9 323 aaPredicted RBP25.97■■□□□ 1.75
GTF3C1-207ENST00000567806 PELP1Q8IZL8 1130 aaKnown RBP25.96■■□□□ 1.75
GTF3C1-207ENST00000567806 PALLDQ8WX93 1383 aa25.95■■□□□ 1.75
GTF3C1-207ENST00000567806 FLAD1Q8NFF5 587 aa25.95■■□□□ 1.74
GTF3C1-207ENST00000567806 EYA1Q99502 592 aa25.95■■□□□ 1.74
GTF3C1-207ENST00000567806 POLKQ9UBT6 870 aa25.95■■□□□ 1.74
GTF3C1-207ENST00000567806 NKX1-1Q15270 411 aaPredicted RBP25.94■■□□□ 1.74
GTF3C1-207ENST00000567806 TNNT2P45379 298 aaPredicted RBP25.93■■□□□ 1.74
GTF3C1-207ENST00000567806 EIF4G2P78344 907 aaKnown RBP eCLIP25.93■■□□□ 1.74
GTF3C1-207ENST00000567806 PIGBQ92521 554 aa25.92■■□□□ 1.74
GTF3C1-207ENST00000567806 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.92■■□□□ 1.74
GTF3C1-207ENST00000567806 MSL1Q68DK7 614 aa25.91■■□□□ 1.74
GTF3C1-207ENST00000567806 NLGN2Q8NFZ4 835 aa25.9■■□□□ 1.74
GTF3C1-207ENST00000567806 AK7Q96M32 723 aa25.9■■□□□ 1.74
GTF3C1-207ENST00000567806 TUBGCP6Q96RT7 1819 aa25.9■■□□□ 1.74
GTF3C1-207ENST00000567806 NCAPD2Q15021 1401 aa25.88■■□□□ 1.73
GTF3C1-207ENST00000567806 UTRNP46939 3433 aa25.88■■□□□ 1.73
GTF3C1-207ENST00000567806 HSPA5P11021 654 aaKnown RBP25.88■■□□□ 1.73
GTF3C1-207ENST00000567806 IFNL2Q8IZJ0 200 aa25.88■■□□□ 1.73
GTF3C1-207ENST00000567806 TMOD3Q9NYL9 352 aa25.88■■□□□ 1.73
GTF3C1-207ENST00000567806 EIF4A2Q14240 407 aaKnown RBP25.87■■□□□ 1.73
GTF3C1-207ENST00000567806 PANK3Q9H999 370 aa25.87■■□□□ 1.73
GTF3C1-207ENST00000567806 COL24A1Q17RW2 1714 aa25.87■■□□□ 1.73
GTF3C1-207ENST00000567806 MAP2P11137 1827 aaKnown RBP25.86■■□□□ 1.73
GTF3C1-207ENST00000567806 PHKG2P15735 406 aa25.85■■□□□ 1.73
GTF3C1-207ENST00000567806 LOC102724428A0A0B4J2F2 783 aa25.84■■□□□ 1.73
GTF3C1-207ENST00000567806 SIK1P57059 783 aa25.84■■□□□ 1.73
GTF3C1-207ENST00000567806 CHD4Q14839 1912 aa25.84■■□□□ 1.73
GTF3C1-207ENST00000567806 PKD1L3Q7Z443 1732 aa25.83■■□□□ 1.73
GTF3C1-207ENST00000567806 GRIN3BO60391 1043 aa25.83■■□□□ 1.73
GTF3C1-207ENST00000567806 CCER1Q8TC90 406 aaPredicted RBP25.83■■□□□ 1.73
GTF3C1-207ENST00000567806 C5P01031 1676 aa25.83■■□□□ 1.73
GTF3C1-207ENST00000567806 PHF14O94880 888 aa25.82■■□□□ 1.72
GTF3C1-207ENST00000567806 ASAP1Q9ULH1 1129 aa25.82■■□□□ 1.72
GTF3C1-207ENST00000567806 CD2APQ9Y5K6 639 aa25.82■■□□□ 1.72
GTF3C1-207ENST00000567806 ANKRD26Q9UPS8 1709 aa25.81■■□□□ 1.72
GTF3C1-207ENST00000567806 ITGB4P16144 1822 aa25.8■■□□□ 1.72
GTF3C1-207ENST00000567806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.8■■□□□ 1.72
GTF3C1-207ENST00000567806 TOGARAM1Q9Y4F4 1720 aa25.8■■□□□ 1.72
GTF3C1-207ENST00000567806 ATP6V1AP38606 617 aa25.79■■□□□ 1.72
GTF3C1-207ENST00000567806 SSFA2P28290 1259 aa25.78■■□□□ 1.72
GTF3C1-207ENST00000567806 PLEKHO1Q53GL0 409 aaPredicted RBP25.78■■□□□ 1.72
GTF3C1-207ENST00000567806 SMIM5Q71RC9 77 aa25.78■■□□□ 1.72
GTF3C1-207ENST00000567806 MORC1Q86VD1 984 aa25.78■■□□□ 1.72
GTF3C1-207ENST00000567806 LINC00116Q8NCU8 138 aa25.78■■□□□ 1.72
GTF3C1-207ENST00000567806 HSP90AB1P08238 724 aaKnown RBP25.77■■□□□ 1.72
GTF3C1-207ENST00000567806 YBX3P16989 372 aaKnown RBP eCLIP25.77■■□□□ 1.72
GTF3C1-207ENST00000567806 AMIGO3Q86WK7 504 aa25.77■■□□□ 1.72
GTF3C1-207ENST00000567806 ATG3Q9NT62 314 aa25.77■■□□□ 1.72
GTF3C1-207ENST00000567806 C4BP0C0L5 1744 aa25.77■■□□□ 1.72
GTF3C1-207ENST00000567806 TAF1LQ8IZX4 1826 aa25.77■■□□□ 1.72
GTF3C1-207ENST00000567806 IGSF1Q8N6C5 1336 aa25.76■■□□□ 1.71
GTF3C1-207ENST00000567806 ERVV-2B6SEH9 535 aa25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms