RNA–Protein interactions for RNA: ENST00000567745.5

THSD4-204, Transcript of thrombospondin type 1 domain containing 4, humanhuman

TSL 2

Gene THSD4, Length 1,218 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD4-204ENST00000567745 RAPGEF4Q8WZA2 1011 aa18.81■□□□□ 0.6
THSD4-204ENST00000567745 U2AF1L5P0DN76 240 aaPredicted RBP18.8■□□□□ 0.6
THSD4-204ENST00000567745 U2AF1Q01081 240 aaKnown RBP eCLIP18.8■□□□□ 0.6
THSD4-204ENST00000567745 DLG5Q8TDM6 1919 aa18.8■□□□□ 0.6
THSD4-204ENST00000567745 CCDC184Q52MB2 194 aa18.79■□□□□ 0.6
THSD4-204ENST00000567745 TOGARAM1Q9Y4F4 1720 aa18.79■□□□□ 0.6
THSD4-204ENST00000567745 PLEKHG2Q9H7P9 1386 aa18.79■□□□□ 0.6
THSD4-204ENST00000567745 TATP17735 454 aaPredicted RBP18.78■□□□□ 0.6
THSD4-204ENST00000567745 CDCA7Q9BWT1 371 aaPredicted RBP18.78■□□□□ 0.6
THSD4-204ENST00000567745 MIER1Q8N108 512 aa18.77■□□□□ 0.6
THSD4-204ENST00000567745 SEPT12Q8IYM1 358 aa18.76■□□□□ 0.59
THSD4-204ENST00000567745 EP400Q96L91 3159 aa18.76■□□□□ 0.59
THSD4-204ENST00000567745 SBF2Q86WG5 1849 aa18.75■□□□□ 0.59
THSD4-204ENST00000567745 NHSQ6T4R5 1651 aa18.75■□□□□ 0.59
THSD4-204ENST00000567745 SCN11AQ9UI33 1791 aa18.74■□□□□ 0.59
THSD4-204ENST00000567745 CCER2I3L3R5 266 aa18.74■□□□□ 0.59
THSD4-204ENST00000567745 PRKAR2BP31323 418 aa18.74■□□□□ 0.59
THSD4-204ENST00000567745 DDB1Q16531 1140 aa18.74■□□□□ 0.59
THSD4-204ENST00000567745 RSPH6AQ9H0K4 717 aa18.74■□□□□ 0.59
THSD4-204ENST00000567745 PCDH11XQ9BZA7 1347 aa18.74■□□□□ 0.59
THSD4-204ENST00000567745 PCDH11YQ9BZA8 1340 aa18.74■□□□□ 0.59
THSD4-204ENST00000567745 MAPK8IP3Q9UPT6 1336 aa18.73■□□□□ 0.59
THSD4-204ENST00000567745 TNS1Q9HBL0 1735 aaKnown RBP18.72■□□□□ 0.59
THSD4-204ENST00000567745 ITGB4P16144 1822 aa18.72■□□□□ 0.59
THSD4-204ENST00000567745 ADAMTS7Q9UKP4 1686 aa18.71■□□□□ 0.59
THSD4-204ENST00000567745 SPG7Q9UQ90 795 aa18.7■□□□□ 0.58
THSD4-204ENST00000567745 KAT6BQ8WYB5 2073 aa18.7■□□□□ 0.58
THSD4-204ENST00000567745 ONECUT3O60422 494 aaPredicted RBP18.69■□□□□ 0.58
THSD4-204ENST00000567745 NEFMP07197 916 aa18.69■□□□□ 0.58
THSD4-204ENST00000567745 PDE3BQ13370 1112 aa18.69■□□□□ 0.58
THSD4-204ENST00000567745 ZNF530Q6P9A1 599 aaPredicted RBP18.69■□□□□ 0.58
THSD4-204ENST00000567745 CCDC146Q8IYE0 955 aa18.69■□□□□ 0.58
THSD4-204ENST00000567745 ZCRB1Q8TBF4 217 aaKnown RBP18.69■□□□□ 0.58
THSD4-204ENST00000567745 BTAF1O14981 1849 aa18.68■□□□□ 0.58
THSD4-204ENST00000567745 EXOC5O00471 708 aa18.68■□□□□ 0.58
THSD4-204ENST00000567745 FCHSD2O94868 740 aa18.68■□□□□ 0.58
THSD4-204ENST00000567745 KRT27Q7Z3Y8 459 aa18.68■□□□□ 0.58
THSD4-204ENST00000567745 MAP3K5Q99683 1374 aa18.68■□□□□ 0.58
THSD4-204ENST00000567745 PLEKHO1Q53GL0 409 aaPredicted RBP18.67■□□□□ 0.58
THSD4-204ENST00000567745 FAM9BQ8IZU0 186 aa18.67■□□□□ 0.58
THSD4-204ENST00000567745 PNISRQ8TF01 805 aaKnown RBP18.67■□□□□ 0.58
THSD4-204ENST00000567745 SIPA1L3O60292 1781 aaPredicted RBP18.67■□□□□ 0.58
THSD4-204ENST00000567745 MRC1P22897 1456 aa18.66■□□□□ 0.58
THSD4-204ENST00000567745 AMOTQ4VCS5 1084 aa18.66■□□□□ 0.58
THSD4-204ENST00000567745 C1orf141Q5JVX7 400 aa18.66■□□□□ 0.58
THSD4-204ENST00000567745 DDX54Q8TDD1 881 aaKnown RBP18.66■□□□□ 0.58
THSD4-204ENST00000567745 PNNQ9H307 717 aaKnown RBP18.66■□□□□ 0.58
THSD4-204ENST00000567745 ADAMTS8Q9UP79 889 aa18.66■□□□□ 0.58
THSD4-204ENST00000567745 KDM6AO15550 1401 aaPredicted RBP18.66■□□□□ 0.58
THSD4-204ENST00000567745 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.65■□□□□ 0.58
THSD4-204ENST00000567745 PAPPAQ13219 1627 aa18.64■□□□□ 0.57
THSD4-204ENST00000567745 FAM182BQ5T319 152 aa18.64■□□□□ 0.57
THSD4-204ENST00000567745 MARCH10Q8NA82 808 aaPredicted RBP18.64■□□□□ 0.57
THSD4-204ENST00000567745 GAS2L2Q8NHY3 880 aa18.64■□□□□ 0.57
THSD4-204ENST00000567745 CYP27B1O15528 508 aa18.63■□□□□ 0.57
THSD4-204ENST00000567745 MTHFSDQ2M296 383 aaKnown RBP18.63■□□□□ 0.57
THSD4-204ENST00000567745 PHACTR3Q96KR7 559 aa18.63■□□□□ 0.57
THSD4-204ENST00000567745 PLEKHF1Q96S99 279 aa18.63■□□□□ 0.57
THSD4-204ENST00000567745 PHKG2P15735 406 aa18.62■□□□□ 0.57
THSD4-204ENST00000567745 RUNDC1Q96C34 613 aa18.62■□□□□ 0.57
THSD4-204ENST00000567745 RGPD3A6NKT7 1758 aaPredicted RBP18.61■□□□□ 0.57
THSD4-204ENST00000567745 RGPD4Q7Z3J3 1758 aa18.61■□□□□ 0.57
THSD4-204ENST00000567745 BCL9O00512 1426 aa18.61■□□□□ 0.57
THSD4-204ENST00000567745 IFNL2Q8IZJ0 200 aa18.61■□□□□ 0.57
THSD4-204ENST00000567745 AKAP4Q5JQC9 854 aa18.6■□□□□ 0.57
THSD4-204ENST00000567745 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
THSD4-204ENST00000567745 KDM3BQ7LBC6 1761 aa18.58■□□□□ 0.57
THSD4-204ENST00000567745 HSP90AB1P08238 724 aaKnown RBP18.58■□□□□ 0.56
THSD4-204ENST00000567745 RRP7AQ9Y3A4 280 aaKnown RBP18.58■□□□□ 0.56
THSD4-204ENST00000567745 UBR2Q8IWV8 1755 aa18.57■□□□□ 0.56
THSD4-204ENST00000567745 SENP3-EIF4A1A0A087X0R7 540 aa18.56■□□□□ 0.56
THSD4-204ENST00000567745 GNAT3A8MTJ3 354 aa18.56■□□□□ 0.56
THSD4-204ENST00000567745 FAM196AQ6ZSG2 479 aa18.56■□□□□ 0.56
THSD4-204ENST00000567745 ACSBG1Q96GR2 724 aa18.56■□□□□ 0.56
THSD4-204ENST00000567745 MPRIPQ6WCQ1 1025 aa18.55■□□□□ 0.56
THSD4-204ENST00000567745 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
THSD4-204ENST00000567745 SYTL4Q96C24 671 aaPredicted RBP18.55■□□□□ 0.56
THSD4-204ENST00000567745 DCAF5Q96JK2 942 aa18.55■□□□□ 0.56
THSD4-204ENST00000567745 LY75O60449 1722 aa18.54■□□□□ 0.56
THSD4-204ENST00000567745 APAF1O14727 1248 aa18.54■□□□□ 0.56
THSD4-204ENST00000567745 TMPOP42166 694 aaKnown RBP18.54■□□□□ 0.56
THSD4-204ENST00000567745 LMOD3Q0VAK6 560 aa18.54■□□□□ 0.56
THSD4-204ENST00000567745 NEUROD2Q15784 382 aa18.54■□□□□ 0.56
THSD4-204ENST00000567745 RREB1Q92766 1687 aa18.54■□□□□ 0.56
THSD4-204ENST00000567745 NKX1-1Q15270 411 aaPredicted RBP18.53■□□□□ 0.56
THSD4-204ENST00000567745 RIPK4P57078 832 aa18.52■□□□□ 0.56
THSD4-204ENST00000567745 MCM10Q7L590 875 aa18.52■□□□□ 0.56
THSD4-204ENST00000567745 CEMIPQ8WUJ3 1361 aa18.52■□□□□ 0.55
THSD4-204ENST00000567745 LAMB4A4D0S4 1761 aa18.51■□□□□ 0.55
THSD4-204ENST00000567745 RNMTO43148 476 aaKnown RBP18.51■□□□□ 0.55
THSD4-204ENST00000567745 TMOD3Q9NYL9 352 aa18.51■□□□□ 0.55
THSD4-204ENST00000567745 C5P01031 1676 aa18.5■□□□□ 0.55
THSD4-204ENST00000567745 NUP188Q5SRE5 1749 aa18.5■□□□□ 0.55
THSD4-204ENST00000567745 TRIM37O94972 964 aa18.5■□□□□ 0.55
THSD4-204ENST00000567745 DCTN1Q14203 1278 aa18.5■□□□□ 0.55
THSD4-204ENST00000567745 UPF1Q92900 1129 aaKnown RBP eCLIP18.5■□□□□ 0.55
THSD4-204ENST00000567745 CICQ96RK0 1608 aaPredicted RBP18.49■□□□□ 0.55
THSD4-204ENST00000567745 TJP1Q07157 1748 aa18.49■□□□□ 0.55
THSD4-204ENST00000567745 PRIM1P49642 420 aaKnown RBP18.49■□□□□ 0.55
THSD4-204ENST00000567745 TEFQ10587 303 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 176.6 ms