RNA–Protein interactions for RNA: ENST00000567212.5

UBFD1-207, Transcript of ubiquitin family domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBFD1, Length 4,727 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-207ENST00000567212 FILIP1LQ4L180 1135 aa15.68■□□□□ 0.1
UBFD1-207ENST00000567212 PRM3Q9NNZ6 103 aa15.68■□□□□ 0.1
UBFD1-207ENST00000567212 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
UBFD1-207ENST00000567212 ZNF396Q96N95 335 aaPredicted RBP15.67■□□□□ 0.1
UBFD1-207ENST00000567212 CARMIL2Q6F5E8 1435 aa15.67■□□□□ 0.1
UBFD1-207ENST00000567212 RIOK3O14730 519 aaKnown RBP15.67■□□□□ 0.1
UBFD1-207ENST00000567212 PHACTR2O75167 634 aa15.67■□□□□ 0.1
UBFD1-207ENST00000567212 PTGS1P23219 599 aa15.67■□□□□ 0.1
UBFD1-207ENST00000567212 ZGPATQ8N5A5 531 aaKnown RBP15.67■□□□□ 0.1
UBFD1-207ENST00000567212 BIN1O00499 593 aa15.67■□□□□ 0.1
UBFD1-207ENST00000567212 SAFBQ15424 915 aaKnown RBP eCLIP15.67■□□□□ 0.1
UBFD1-207ENST00000567212 HS1BP3Q53T59 392 aa15.67■□□□□ 0.1
UBFD1-207ENST00000567212 RALYLQ86SE5 291 aaKnown RBP15.67■□□□□ 0.1
UBFD1-207ENST00000567212 SMARCE1Q969G3 411 aa15.67■□□□□ 0.1
UBFD1-207ENST00000567212 NCOA2Q15596 1464 aa15.67■□□□□ 0.1
UBFD1-207ENST00000567212 MYOM3Q5VTT5 1437 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 SHTN1A0MZ66 631 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 PPFIA3O75145 1194 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 SKILP12757 684 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 TRIM27P14373 513 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 CT47A1Q5JQC4 288 aaPredicted RBP15.66■□□□□ 0.1
UBFD1-207ENST00000567212 TSHZ3Q63HK5 1081 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 TAX1BP1Q86VP1 789 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 WASHC4Q2M389 1173 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 GAS2L3Q86XJ1 694 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 FAM107BQ9H098 131 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 NINLQ9Y2I6 1382 aa15.66■□□□□ 0.1
UBFD1-207ENST00000567212 AIMP1Q12904 312 aaKnown RBP15.65■□□□□ 0.1
UBFD1-207ENST00000567212 VPS53Q5VIR6 699 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 ISM2Q6H9L7 571 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 BLOC1S2Q6QNY1 142 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 TMC6Q7Z403 805 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 USP48Q86UV5 1035 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 TXLNBQ8N3L3 684 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 RASSF4Q9H2L5 321 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 GNAI2P04899 355 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 CAPN2P17655 700 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 CPLX3Q8WVH0 158 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 SMARCC1Q92922 1105 aaPredicted RBP15.65■□□□□ 0.1
UBFD1-207ENST00000567212 DNAI1Q9UI46 699 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 LIG1P18858 919 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 TEFQ10587 303 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 NUTM1Q86Y26 1132 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 GOLGA6L10A6NI86 522 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 FEZ1Q99689 392 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 CNPY2Q9Y2B0 182 aa15.65■□□□□ 0.1
UBFD1-207ENST00000567212 GNAI3P08754 354 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 CASQ1P31415 396 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 EFCAB2Q5VUJ9 269 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 MICALL1Q8N3F8 863 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 NGDNQ8NEJ9 315 aaKnown RBP15.64■□□□□ 0.09
UBFD1-207ENST00000567212 UVSSAQ2YD98 709 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 HSP90AB4PQ58FF6 505 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 CCDC181Q5TID7 509 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 MYRIPQ8NFW9 859 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 SIL1Q9H173 461 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 RAI14Q9P0K7 980 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 CFAP45Q9UL16 551 aa15.64■□□□□ 0.09
UBFD1-207ENST00000567212 GUCY1B3Q02153 619 aa15.63■□□□□ 0.09
UBFD1-207ENST00000567212 DYDC1Q8WWB3 177 aa15.63■□□□□ 0.09
UBFD1-207ENST00000567212 TMX3Q96JJ7 454 aa15.63■□□□□ 0.09
UBFD1-207ENST00000567212 BMP2KLQ5H9B9 411 aa15.63■□□□□ 0.09
UBFD1-207ENST00000567212 GNG11P61952 73 aa15.63■□□□□ 0.09
UBFD1-207ENST00000567212 CASKIN1Q8WXD9 1431 aa15.63■□□□□ 0.09
UBFD1-207ENST00000567212 CSB-PGBD3P0DP91 1061 aa15.62■□□□□ 0.09
UBFD1-207ENST00000567212 PPP6R1Q9UPN7 881 aa15.62■□□□□ 0.09
UBFD1-207ENST00000567212 EPB41L2O43491 1005 aaKnown RBP15.62■□□□□ 0.09
UBFD1-207ENST00000567212 DRC1Q96MC2 740 aa15.62■□□□□ 0.09
UBFD1-207ENST00000567212 STX6O43752 255 aa15.62■□□□□ 0.09
UBFD1-207ENST00000567212 ATP2C2O75185 946 aa15.62■□□□□ 0.09
UBFD1-207ENST00000567212 PRPF40BQ6NWY9 871 aaKnown RBP15.62■□□□□ 0.09
UBFD1-207ENST00000567212 NEXNQ0ZGT2 675 aa15.61■□□□□ 0.09
UBFD1-207ENST00000567212 KRBA2Q6ZNG9 492 aa15.61■□□□□ 0.09
UBFD1-207ENST00000567212 BCL2L12Q9HB09 334 aa15.61■□□□□ 0.09
UBFD1-207ENST00000567212 ARFGAP3Q9NP61 516 aa15.61■□□□□ 0.09
UBFD1-207ENST00000567212 ZSCAN12O43309 604 aa15.61■□□□□ 0.09
UBFD1-207ENST00000567212 ZNF397Q8NF99 534 aaPredicted RBP15.61■□□□□ 0.09
UBFD1-207ENST00000567212 HMGXB3Q12766 1538 aa15.61■□□□□ 0.09
UBFD1-207ENST00000567212 NKTRP30414 1462 aaKnown RBP15.61■□□□□ 0.09
UBFD1-207ENST00000567212 CBFA2T2O43439 604 aa15.61■□□□□ 0.09
UBFD1-207ENST00000567212 SLU7O95391 586 aaKnown RBP15.61■□□□□ 0.09
UBFD1-207ENST00000567212 UBE2HP62256 183 aa15.61■□□□□ 0.09
UBFD1-207ENST00000567212 TOP1P11387 765 aaKnown RBP15.6■□□□□ 0.09
UBFD1-207ENST00000567212 SMC5Q8IY18 1101 aa15.6■□□□□ 0.09
UBFD1-207ENST00000567212 SCAND2PQ9GZW5 306 aaPredicted RBP15.6■□□□□ 0.09
UBFD1-207ENST00000567212 ANO10Q9NW15 660 aa15.6■□□□□ 0.09
UBFD1-207ENST00000567212 NCOA1Q15788 1441 aa15.6■□□□□ 0.09
UBFD1-207ENST00000567212 ANO6Q4KMQ2 910 aa15.6■□□□□ 0.09
UBFD1-207ENST00000567212 HSP90AA4PQ58FG1 418 aa15.6■□□□□ 0.09
UBFD1-207ENST00000567212 CCDC47Q96A33 483 aaKnown RBP15.6■□□□□ 0.09
UBFD1-207ENST00000567212 DNA2P51530 1060 aa15.59■□□□□ 0.09
UBFD1-207ENST00000567212 TTC31Q49AM3 519 aaPredicted RBP15.59■□□□□ 0.09
UBFD1-207ENST00000567212 RLBP1P12271 317 aa15.59■□□□□ 0.09
UBFD1-207ENST00000567212 KLHL10Q6JEL2 608 aa15.59■□□□□ 0.09
UBFD1-207ENST00000567212 GBP3Q9H0R5 595 aa15.59■□□□□ 0.09
UBFD1-207ENST00000567212 DTNBO60941 627 aa15.59■□□□□ 0.09
UBFD1-207ENST00000567212 PTPRGP23470 1445 aa15.58■□□□□ 0.09
UBFD1-207ENST00000567212 PRG4Q92954 1404 aaPredicted RBP15.58■□□□□ 0.09
UBFD1-207ENST00000567212 MX1P20591 662 aa15.58■□□□□ 0.08
UBFD1-207ENST00000567212 TMPOP42166 694 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms