RNA–Protein interactions for RNA: ENST00000567111.1

E4F1-208, Transcript of E4F transcription factor 1, humanhuman

TSL 2

Gene E4F1, Length 691 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-208ENST00000567111 PLEKHO1Q53GL0 409 aaPredicted RBP30.18■■■□□ 2.42
E4F1-208ENST00000567111 WNK3Q9BYP7 1800 aa30.17■■■□□ 2.42
E4F1-208ENST00000567111 KDRP35968 1356 aa30.17■■■□□ 2.42
E4F1-208ENST00000567111 AMOTQ4VCS5 1084 aa30.17■■■□□ 2.42
E4F1-208ENST00000567111 PNNQ9H307 717 aaKnown RBP30.17■■■□□ 2.42
E4F1-208ENST00000567111 PLEKHG2Q9H7P9 1386 aa30.16■■■□□ 2.42
E4F1-208ENST00000567111 OVOS2A0A0G2JMS6 1433 aa30.16■■■□□ 2.42
E4F1-208ENST00000567111 FCHSD2O94868 740 aa30.16■■■□□ 2.42
E4F1-208ENST00000567111 DDX54Q8TDD1 881 aaKnown RBP30.16■■■□□ 2.42
E4F1-208ENST00000567111 MEGF6O75095 1541 aa30.16■■■□□ 2.42
E4F1-208ENST00000567111 RGPD1P0DJD0 1748 aa30.16■■■□□ 2.42
E4F1-208ENST00000567111 BRWD3Q6RI45 1802 aa30.15■■■□□ 2.42
E4F1-208ENST00000567111 WDR43Q15061 677 aaKnown RBP eCLIP30.15■■■□□ 2.42
E4F1-208ENST00000567111 TNS2Q63HR2 1409 aa30.13■■■□□ 2.41
E4F1-208ENST00000567111 NEFMP07197 916 aa30.13■■■□□ 2.41
E4F1-208ENST00000567111 FAM196AQ6ZSG2 479 aa30.13■■■□□ 2.41
E4F1-208ENST00000567111 MARCH10Q8NA82 808 aaPredicted RBP30.12■■■□□ 2.41
E4F1-208ENST00000567111 MRS2Q9HD23 443 aa30.11■■■□□ 2.41
E4F1-208ENST00000567111 PCDH11XQ9BZA7 1347 aa30.11■■■□□ 2.41
E4F1-208ENST00000567111 PCDH11YQ9BZA8 1340 aa30.11■■■□□ 2.41
E4F1-208ENST00000567111 LRRC37A3O60309 1634 aa30.1■■■□□ 2.41
E4F1-208ENST00000567111 PRKAR2BP31323 418 aa30.08■■■□□ 2.41
E4F1-208ENST00000567111 FAM182BQ5T319 152 aa30.08■■■□□ 2.41
E4F1-208ENST00000567111 RSPH6AQ9H0K4 717 aa30.08■■■□□ 2.41
E4F1-208ENST00000567111 IFNL2Q8IZJ0 200 aa30.07■■■□□ 2.4
E4F1-208ENST00000567111 C1orf141Q5JVX7 400 aa30.05■■■□□ 2.4
E4F1-208ENST00000567111 ZNF530Q6P9A1 599 aaPredicted RBP30.05■■■□□ 2.4
E4F1-208ENST00000567111 CCDC184Q52MB2 194 aa30.04■■■□□ 2.4
E4F1-208ENST00000567111 CYP27B1O15528 508 aa30.03■■■□□ 2.4
E4F1-208ENST00000567111 HSP90AB1P08238 724 aaKnown RBP30.03■■■□□ 2.4
E4F1-208ENST00000567111 GAS2L2Q8NHY3 880 aa30.02■■■□□ 2.4
E4F1-208ENST00000567111 ADAMTS8Q9UP79 889 aa30.02■■■□□ 2.4
E4F1-208ENST00000567111 PHKG2P15735 406 aa30.01■■■□□ 2.39
E4F1-208ENST00000567111 CCDC125Q86Z20 511 aa30.01■■■□□ 2.39
E4F1-208ENST00000567111 PKD1L3Q7Z443 1732 aa30■■■□□ 2.39
E4F1-208ENST00000567111 CCER2I3L3R5 266 aa30■■■□□ 2.39
E4F1-208ENST00000567111 MTHFSDQ2M296 383 aaKnown RBP30■■■□□ 2.39
E4F1-208ENST00000567111 MAPK8IP3Q9UPT6 1336 aa29.99■■■□□ 2.39
E4F1-208ENST00000567111 BCL9O00512 1426 aa29.99■■■□□ 2.39
E4F1-208ENST00000567111 NKX1-1Q15270 411 aaPredicted RBP29.99■■■□□ 2.39
E4F1-208ENST00000567111 PNISRQ8TF01 805 aaKnown RBP29.99■■■□□ 2.39
E4F1-208ENST00000567111 AKAP4Q5JQC9 854 aa29.98■■■□□ 2.39
E4F1-208ENST00000567111 PHACTR3Q96KR7 559 aa29.98■■■□□ 2.39
E4F1-208ENST00000567111 SF3B2Q13435 895 aaKnown RBP29.97■■■□□ 2.39
E4F1-208ENST00000567111 KAT6BQ8WYB5 2073 aa29.96■■■□□ 2.39
E4F1-208ENST00000567111 PLEKHF1Q96S99 279 aa29.96■■■□□ 2.39
E4F1-208ENST00000567111 TRIM37O94972 964 aa29.95■■■□□ 2.39
E4F1-208ENST00000567111 MIER1Q8N108 512 aa29.95■■■□□ 2.39
E4F1-208ENST00000567111 DCAF5Q96JK2 942 aa29.95■■■□□ 2.39
E4F1-208ENST00000567111 RUNDC1Q96C34 613 aa29.94■■■□□ 2.38
E4F1-208ENST00000567111 ACSBG1Q96GR2 724 aa29.93■■■□□ 2.38
E4F1-208ENST00000567111 BCL11BQ9C0K0 894 aaPredicted RBP29.93■■■□□ 2.38
E4F1-208ENST00000567111 SHANK3Q9BYB0 1731 aa29.93■■■□□ 2.38
E4F1-208ENST00000567111 UPF1Q92900 1129 aaKnown RBP eCLIP29.92■■■□□ 2.38
E4F1-208ENST00000567111 GNAT3A8MTJ3 354 aa29.91■■■□□ 2.38
E4F1-208ENST00000567111 PRIM1P49642 420 aaKnown RBP29.91■■■□□ 2.38
E4F1-208ENST00000567111 SYTL4Q96C24 671 aaPredicted RBP29.9■■■□□ 2.38
E4F1-208ENST00000567111 ERVV-2B6SEH9 535 aa29.89■■■□□ 2.38
E4F1-208ENST00000567111 MPRIPQ6WCQ1 1025 aa29.89■■■□□ 2.38
E4F1-208ENST00000567111 CCDC146Q8IYE0 955 aa29.89■■■□□ 2.38
E4F1-208ENST00000567111 RTF1Q92541 710 aaKnown RBP29.89■■■□□ 2.38
E4F1-208ENST00000567111 NFE2L2Q16236 605 aa29.88■■■□□ 2.37
E4F1-208ENST00000567111 FAM9BQ8IZU0 186 aa29.88■■■□□ 2.37
E4F1-208ENST00000567111 KCNQ2O43526 872 aa29.87■■■□□ 2.37
E4F1-208ENST00000567111 HTATSF1O43719 755 aaKnown RBP29.87■■■□□ 2.37
E4F1-208ENST00000567111 MAP3K5Q99683 1374 aa29.86■■■□□ 2.37
E4F1-208ENST00000567111 APBA3O96018 575 aa29.85■■■□□ 2.37
E4F1-208ENST00000567111 RNMTO43148 476 aaKnown RBP29.84■■■□□ 2.37
E4F1-208ENST00000567111 CABP4P57796 275 aa29.84■■■□□ 2.37
E4F1-208ENST00000567111 TMOD3Q9NYL9 352 aa29.84■■■□□ 2.37
E4F1-208ENST00000567111 SBF2Q86WG5 1849 aa29.84■■■□□ 2.37
E4F1-208ENST00000567111 BAG6P46379 1132 aa29.83■■■□□ 2.37
E4F1-208ENST00000567111 TMPOP42166 694 aaKnown RBP29.82■■■□□ 2.36
E4F1-208ENST00000567111 RIPK4P57078 832 aa29.82■■■□□ 2.36
E4F1-208ENST00000567111 LGR6Q9HBX8 967 aa29.82■■■□□ 2.36
E4F1-208ENST00000567111 LMOD3Q0VAK6 560 aa29.81■■■□□ 2.36
E4F1-208ENST00000567111 IL17REQ8NFR9 667 aa29.79■■■□□ 2.36
E4F1-208ENST00000567111 APAF1O14727 1248 aa29.78■■■□□ 2.36
E4F1-208ENST00000567111 TEFQ10587 303 aa29.78■■■□□ 2.36
E4F1-208ENST00000567111 NEUROD2Q15784 382 aa29.78■■■□□ 2.36
E4F1-208ENST00000567111 PTF1AQ7RTS3 328 aa29.78■■■□□ 2.36
E4F1-208ENST00000567111 KDM6AO15550 1401 aaPredicted RBP29.78■■■□□ 2.36
E4F1-208ENST00000567111 NHSQ6T4R5 1651 aa29.77■■■□□ 2.36
E4F1-208ENST00000567111 PLSCR1O15162 318 aa29.77■■■□□ 2.36
E4F1-208ENST00000567111 NFATC2IPQ8NCF5 419 aa29.77■■■□□ 2.36
E4F1-208ENST00000567111 PIGBQ92521 554 aa29.77■■■□□ 2.36
E4F1-208ENST00000567111 DOT1LQ8TEK3 1739 aa29.76■■■□□ 2.36
E4F1-208ENST00000567111 SMARCC1Q92922 1105 aaPredicted RBP29.76■■■□□ 2.35
E4F1-208ENST00000567111 SLC52A2Q9HAB3 445 aa29.76■■■□□ 2.35
E4F1-208ENST00000567111 RRP7AQ9Y3A4 280 aaKnown RBP29.75■■■□□ 2.35
E4F1-208ENST00000567111 SCN11AQ9UI33 1791 aa29.73■■■□□ 2.35
E4F1-208ENST00000567111 MCM10Q7L590 875 aa29.73■■■□□ 2.35
E4F1-208ENST00000567111 ITGB4P16144 1822 aa29.72■■■□□ 2.35
E4F1-208ENST00000567111 EN1Q05925 392 aaPredicted RBP29.71■■■□□ 2.35
E4F1-208ENST00000567111 DEFB132Q7Z7B7 95 aa29.71■■■□□ 2.35
E4F1-208ENST00000567111 CEMIPQ8WUJ3 1361 aa29.7■■■□□ 2.35
E4F1-208ENST00000567111 EP400Q96L91 3159 aa29.7■■■□□ 2.35
E4F1-208ENST00000567111 DCTN1Q14203 1278 aa29.7■■■□□ 2.35
E4F1-208ENST00000567111 TOGARAM1Q9Y4F4 1720 aa29.69■■■□□ 2.34
E4F1-208ENST00000567111 HMGB2P26583 209 aaKnown RBP29.69■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms