RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 ZCCHC11Q5TAX3 1644 aaKnown RBP30.38■■■□□ 2.45
FANCA-221ENST00000566889 RPAP2Q8IXW5 612 aaPredicted RBP30.37■■■□□ 2.45
FANCA-221ENST00000566889 C16orf71Q8IYS4 520 aaPredicted RBP30.37■■■□□ 2.45
FANCA-221ENST00000566889 CABP2Q9NPB3 220 aa30.37■■■□□ 2.45
FANCA-221ENST00000566889 DIAPH3Q9NSV4 1193 aa30.37■■■□□ 2.45
FANCA-221ENST00000566889 CHGAP10645 457 aaKnown RBP30.36■■■□□ 2.45
FANCA-221ENST00000566889 TSPYL6Q8N831 410 aa30.36■■■□□ 2.45
FANCA-221ENST00000566889 ASXL2Q76L83 1435 aa30.36■■■□□ 2.45
FANCA-221ENST00000566889 UHRF1BP1LA0JNW5 1464 aa30.35■■■□□ 2.45
FANCA-221ENST00000566889 NFE2L2Q16236 605 aa30.35■■■□□ 2.45
FANCA-221ENST00000566889 ATP2B3Q16720 1220 aa30.35■■■□□ 2.45
FANCA-221ENST00000566889 BCL2L12Q9HB09 334 aa30.35■■■□□ 2.45
FANCA-221ENST00000566889 FYB1O15117 783 aa30.35■■■□□ 2.45
FANCA-221ENST00000566889 NEK4P51957 841 aa30.35■■■□□ 2.45
FANCA-221ENST00000566889 FOXD4L5Q5VV16 416 aaPredicted RBP30.35■■■□□ 2.45
FANCA-221ENST00000566889 FOXD4L4Q8WXT5 416 aaPredicted RBP30.35■■■□□ 2.45
FANCA-221ENST00000566889 ZNF853P0CG23 659 aa30.34■■■□□ 2.45
FANCA-221ENST00000566889 PDCL2Q8N4E4 241 aa30.34■■■□□ 2.45
FANCA-221ENST00000566889 TSC1Q92574 1164 aa30.34■■■□□ 2.45
FANCA-221ENST00000566889 JARID2Q92833 1246 aaPredicted RBP30.34■■■□□ 2.45
FANCA-221ENST00000566889 ADCY5O95622 1261 aa30.33■■■□□ 2.45
FANCA-221ENST00000566889 PRKAR2BP31323 418 aa30.33■■■□□ 2.45
FANCA-221ENST00000566889 FGD1P98174 961 aa30.33■■■□□ 2.45
FANCA-221ENST00000566889 TWISTNBQ3B726 338 aaPredicted RBP30.33■■■□□ 2.45
FANCA-221ENST00000566889 TERF2IPQ9NYB0 399 aa30.33■■■□□ 2.45
FANCA-221ENST00000566889 USP25Q9UHP3 1055 aa30.32■■■□□ 2.45
FANCA-221ENST00000566889 TPM3P06753 285 aa30.32■■■□□ 2.44
FANCA-221ENST00000566889 CHAF1AQ13111 956 aaPredicted RBP30.32■■■□□ 2.44
FANCA-221ENST00000566889 TAF3Q5VWG9 929 aa30.32■■■□□ 2.44
FANCA-221ENST00000566889 ATP10DQ9P241 1426 aa30.32■■■□□ 2.44
FANCA-221ENST00000566889 ZNF830Q96NB3 372 aaPredicted RBP30.31■■■□□ 2.44
FANCA-221ENST00000566889 CCDC183Q5T5S1 534 aa30.31■■■□□ 2.44
FANCA-221ENST00000566889 TTC12Q9H892 705 aaPredicted RBP30.31■■■□□ 2.44
FANCA-221ENST00000566889 OTUD7AQ8TE49 926 aaPredicted RBP30.3■■■□□ 2.44
FANCA-221ENST00000566889 TMEM87AQ8NBN3 555 aa30.3■■■□□ 2.44
FANCA-221ENST00000566889 ANKRD7Q92527 254 aa30.3■■■□□ 2.44
FANCA-221ENST00000566889 MBIPQ9NS73 344 aa30.3■■■□□ 2.44
FANCA-221ENST00000566889 ATAD2Q6PL18 1390 aa30.29■■■□□ 2.44
FANCA-221ENST00000566889 MCCP23508 829 aa30.28■■■□□ 2.44
FANCA-221ENST00000566889 ANAPC15P60006 121 aa30.28■■■□□ 2.44
FANCA-221ENST00000566889 WDR33Q9C0J8 1336 aaKnown RBP30.28■■■□□ 2.44
FANCA-221ENST00000566889 FEZ1Q99689 392 aa30.27■■■□□ 2.44
FANCA-221ENST00000566889 OSBPL3Q9H4L5 887 aa30.27■■■□□ 2.44
FANCA-221ENST00000566889 USP48Q86UV5 1035 aa30.27■■■□□ 2.44
FANCA-221ENST00000566889 CEP85Q6P2H3 762 aa30.26■■■□□ 2.43
FANCA-221ENST00000566889 RTL1A6NKG5 1358 aa30.26■■■□□ 2.43
FANCA-221ENST00000566889 ZBTB7CA1YPR0 619 aa30.26■■■□□ 2.43
FANCA-221ENST00000566889 ABCA9Q8IUA7 1624 aa30.25■■■□□ 2.43
FANCA-221ENST00000566889 KDM4AO75164 1064 aa30.25■■■□□ 2.43
FANCA-221ENST00000566889 GADD45BO75293 160 aaPredicted RBP30.25■■■□□ 2.43
FANCA-221ENST00000566889 MX1P20591 662 aa30.24■■■□□ 2.43
FANCA-221ENST00000566889 ELL2O00472 640 aaPredicted RBP30.24■■■□□ 2.43
FANCA-221ENST00000566889 CTIFO43310 598 aaKnown RBP30.24■■■□□ 2.43
FANCA-221ENST00000566889 KIAA1524Q8TCG1 905 aa30.24■■■□□ 2.43
FANCA-221ENST00000566889 LMOD3Q0VAK6 560 aa30.23■■■□□ 2.43
FANCA-221ENST00000566889 SRPK2P78362 688 aaKnown RBP30.23■■■□□ 2.43
FANCA-221ENST00000566889 IL17RAQ96F46 866 aa30.23■■■□□ 2.43
FANCA-221ENST00000566889 CAMSAP1Q5T5Y3 1602 aa30.22■■■□□ 2.43
FANCA-221ENST00000566889 C17orf53Q8N3J3 647 aaPredicted RBP30.22■■■□□ 2.43
FANCA-221ENST00000566889 FRMPD1Q5SYB0 1578 aa30.22■■■□□ 2.43
FANCA-221ENST00000566889 CD163L1Q9NR16 1453 aa30.21■■■□□ 2.43
FANCA-221ENST00000566889 THUMPD2Q9BTF0 503 aaKnown RBP30.21■■■□□ 2.43
FANCA-221ENST00000566889 RGS12O14924 1447 aa30.21■■■□□ 2.43
FANCA-221ENST00000566889 MPNDQ8N594 471 aa30.2■■■□□ 2.43
FANCA-221ENST00000566889 C8orf58Q8NAV2 365 aa30.2■■■□□ 2.43
FANCA-221ENST00000566889 RIOK3O14730 519 aaKnown RBP30.2■■■□□ 2.42
FANCA-221ENST00000566889 PHACTR3Q96KR7 559 aa30.2■■■□□ 2.42
FANCA-221ENST00000566889 VGFO15240 615 aaPredicted RBP30.19■■■□□ 2.42
FANCA-221ENST00000566889 SMARCA5O60264 1052 aaPredicted RBP30.19■■■□□ 2.42
FANCA-221ENST00000566889 HAP1P54257 671 aaPredicted RBP30.19■■■□□ 2.42
FANCA-221ENST00000566889 ARHGEF40Q8TER5 1519 aa30.19■■■□□ 2.42
FANCA-221ENST00000566889 HCLS1P14317 486 aaPredicted RBP30.19■■■□□ 2.42
FANCA-221ENST00000566889 SYCP1Q15431 976 aa30.19■■■□□ 2.42
FANCA-221ENST00000566889 KIF20BQ96Q89 1820 aa30.19■■■□□ 2.42
FANCA-221ENST00000566889 SSH2Q76I76 1423 aa30.18■■■□□ 2.42
FANCA-221ENST00000566889 NPATQ14207 1427 aa30.18■■■□□ 2.42
FANCA-221ENST00000566889 FAM177BA6PVY3 158 aa30.18■■■□□ 2.42
FANCA-221ENST00000566889 GOLGA6L6A8MZA4 724 aa30.18■■■□□ 2.42
FANCA-221ENST00000566889 HDGFL2Q7Z4V5 671 aaPredicted RBP30.18■■■□□ 2.42
FANCA-221ENST00000566889 OGFRQ9NZT2 677 aa30.18■■■□□ 2.42
FANCA-221ENST00000566889 SPDYE4A6NLX3 237 aa30.17■■■□□ 2.42
FANCA-221ENST00000566889 ESYT1Q9BSJ8 1104 aa30.17■■■□□ 2.42
FANCA-221ENST00000566889 GDPD2Q9HCC8 539 aa30.17■■■□□ 2.42
FANCA-221ENST00000566889 CPSF1Q10570 1443 aaKnown RBP30.17■■■□□ 2.42
FANCA-221ENST00000566889 CLTCQ00610 1675 aaKnown RBP30.17■■■□□ 2.42
FANCA-221ENST00000566889 HMMRO75330 724 aa30.16■■■□□ 2.42
FANCA-221ENST00000566889 PDE1AP54750 535 aa30.16■■■□□ 2.42
FANCA-221ENST00000566889 UBE2HP62256 183 aa30.16■■■□□ 2.42
FANCA-221ENST00000566889 RPAP1Q9BWH6 1393 aaPredicted RBP30.15■■■□□ 2.42
FANCA-221ENST00000566889 ERCC6L2Q5T890 1561 aa30.14■■■□□ 2.42
FANCA-221ENST00000566889 U2AF2P26368 475 aaKnown RBP eCLIP30.14■■■□□ 2.421e-22■■■■■ 37.1
FANCA-221ENST00000566889 EPB41L2O43491 1005 aaKnown RBP30.13■■■□□ 2.41
FANCA-221ENST00000566889 GABPB1Q06547 395 aaPredicted RBP30.12■■■□□ 2.41
FANCA-221ENST00000566889 ABCC3O15438 1527 aa30.12■■■□□ 2.41
FANCA-221ENST00000566889 FUCA2Q9BTY2 467 aa30.12■■■□□ 2.41
FANCA-221ENST00000566889 CHD1O14646 1710 aa30.12■■■□□ 2.41
FANCA-221ENST00000566889 SRCIN1Q9C0H9 1055 aa30.11■■■□□ 2.41
FANCA-221ENST00000566889 KCNF1Q9H3M0 494 aa30.11■■■□□ 2.41
FANCA-221ENST00000566889 POLKQ9UBT6 870 aa30.11■■■□□ 2.41
FANCA-221ENST00000566889 RIMS2Q9UQ26 1411 aa30.11■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms