RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 MTHFSDQ2M296 383 aaKnown RBP14.08□□□□□ -0.16
CDH1-210ENST00000566612 MRE11P49959 708 aa14.08□□□□□ -0.16
CDH1-210ENST00000566612 UPF3BQ9BZI7 483 aaKnown RBP14.08□□□□□ -0.16
CDH1-210ENST00000566612 SYNMO15061 1565 aa14.07□□□□□ -0.16
CDH1-210ENST00000566612 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
CDH1-210ENST00000566612 MYOM2P54296 1465 aa14.07□□□□□ -0.16
CDH1-210ENST00000566612 EVA1CP58658 441 aa14.07□□□□□ -0.16
CDH1-210ENST00000566612 PLEKHF1Q96S99 279 aa14.07□□□□□ -0.16
CDH1-210ENST00000566612 GLIPR1L2Q4G1C9 344 aa14.06□□□□□ -0.16
CDH1-210ENST00000566612 DRC7Q8IY82 874 aa14.06□□□□□ -0.16
CDH1-210ENST00000566612 CNTROBQ8N137 903 aa14.06□□□□□ -0.16
CDH1-210ENST00000566612 RNF214Q8ND24 703 aa14.06□□□□□ -0.16
CDH1-210ENST00000566612 NEUROD6Q96NK8 337 aa14.05□□□□□ -0.16
CDH1-210ENST00000566612 SMC3Q9UQE7 1217 aa14.05□□□□□ -0.16
CDH1-210ENST00000566612 MAP3K19Q56UN5 1328 aa14.05□□□□□ -0.16
CDH1-210ENST00000566612 MX1P20591 662 aa14.05□□□□□ -0.16
CDH1-210ENST00000566612 SSFA2P28290 1259 aa14.05□□□□□ -0.16
CDH1-210ENST00000566612 TNPO1Q92973 898 aaKnown RBP14.05□□□□□ -0.16
CDH1-210ENST00000566612 EYA1Q99502 592 aa14.05□□□□□ -0.16
CDH1-210ENST00000566612 PTPRCP08575 1304 aa14.04□□□□□ -0.16
CDH1-210ENST00000566612 CWC27Q6UX04 472 aaKnown RBP14.04□□□□□ -0.16
CDH1-210ENST00000566612 NPHP1O15259 732 aa14.04□□□□□ -0.16
CDH1-210ENST00000566612 SDSP20132 328 aa14.04□□□□□ -0.16
CDH1-210ENST00000566612 G2E3Q7L622 706 aa14.04□□□□□ -0.16
CDH1-210ENST00000566612 ANKRD44Q8N8A2 993 aa14.04□□□□□ -0.16
CDH1-210ENST00000566612 ARID3AQ99856 593 aa14.04□□□□□ -0.16
CDH1-210ENST00000566612 FSD1Q9BTV5 496 aa14.04□□□□□ -0.16
CDH1-210ENST00000566612 MLH3Q9UHC1 1453 aa14.04□□□□□ -0.16
CDH1-210ENST00000566612 NASPP49321 788 aaPredicted RBP14.03□□□□□ -0.16
CDH1-210ENST00000566612 TTC22Q5TAA0 569 aa14.03□□□□□ -0.16
CDH1-210ENST00000566612 ZFYVE9O95405 1425 aa14.03□□□□□ -0.16
CDH1-210ENST00000566612 NEO1Q92859 1461 aa14.03□□□□□ -0.16
CDH1-210ENST00000566612 OTUD7AQ8TE49 926 aaPredicted RBP14.03□□□□□ -0.16
CDH1-210ENST00000566612 SYTL4Q96C24 671 aaPredicted RBP14.03□□□□□ -0.16
CDH1-210ENST00000566612 CIZ1Q9ULV3 898 aaPredicted RBP14.02□□□□□ -0.16
CDH1-210ENST00000566612 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.02□□□□□ -0.17
CDH1-210ENST00000566612 KCNA6P17658 529 aa14.02□□□□□ -0.17
CDH1-210ENST00000566612 DDX54Q8TDD1 881 aaKnown RBP14.02□□□□□ -0.17
CDH1-210ENST00000566612 TET3O43151 1660 aa14.02□□□□□ -0.17
CDH1-210ENST00000566612 PI4KAP2A4QPH2 592 aa14.02□□□□□ -0.17
CDH1-210ENST00000566612 LTKP29376 864 aa14.02□□□□□ -0.17
CDH1-210ENST00000566612 PI4KAP1Q8N8J0 262 aa14.02□□□□□ -0.17
CDH1-210ENST00000566612 TATP17735 454 aaPredicted RBP14.01□□□□□ -0.17
CDH1-210ENST00000566612 FOSBP53539 338 aa14.01□□□□□ -0.17
CDH1-210ENST00000566612 LARP6Q9BRS8 491 aaKnown RBP14.01□□□□□ -0.17
CDH1-210ENST00000566612 GRPEL1Q9HAV7 217 aa14.01□□□□□ -0.17
CDH1-210ENST00000566612 KIAA2012Q0VF49 1180 aa14.01□□□□□ -0.17
CDH1-210ENST00000566612 ATP6V1DQ9Y5K8 247 aa14.01□□□□□ -0.17
CDH1-210ENST00000566612 METP08581 1390 aa14.01□□□□□ -0.17
CDH1-210ENST00000566612 E9PCH4 1651 aa14.01□□□□□ -0.17
CDH1-210ENST00000566612 AACSQ86V21 672 aa14□□□□□ -0.17
CDH1-210ENST00000566612 KCNH5Q8NCM2 988 aa14□□□□□ -0.17
CDH1-210ENST00000566612 DCTPP1Q9H773 170 aa14□□□□□ -0.17
CDH1-210ENST00000566612 EFCAB6Q5THR3 1501 aa14□□□□□ -0.17
CDH1-210ENST00000566612 H3BQV1 296 aa14□□□□□ -0.17
CDH1-210ENST00000566612 IFFO2Q5TF58 517 aa14□□□□□ -0.17
CDH1-210ENST00000566612 CEP85Q6P2H3 762 aa14□□□□□ -0.17
CDH1-210ENST00000566612 DNAJC2Q99543 621 aaKnown RBP14□□□□□ -0.17
CDH1-210ENST00000566612 KIF1BO60333 1816 aa14□□□□□ -0.17
CDH1-210ENST00000566612 PHF14O94880 888 aa14□□□□□ -0.17
CDH1-210ENST00000566612 GNL2Q13823 731 aaKnown RBP14□□□□□ -0.17
CDH1-210ENST00000566612 FAM184AQ8NB25 1140 aa14□□□□□ -0.17
CDH1-210ENST00000566612 EDC4Q6P2E9 1401 aaKnown RBP14□□□□□ -0.17
CDH1-210ENST00000566612 PLEKHM2Q8IWE5 1019 aa14□□□□□ -0.17
CDH1-210ENST00000566612 LRRC59Q96AG4 307 aaKnown RBP14□□□□□ -0.17
CDH1-210ENST00000566612 MADDQ8WXG6 1647 aa13.99□□□□□ -0.17
CDH1-210ENST00000566612 PPP1R42Q7Z4L9 355 aa13.99□□□□□ -0.17
CDH1-210ENST00000566612 DNAAF4Q8WXU2 420 aa13.99□□□□□ -0.17
CDH1-210ENST00000566612 RNF20Q5VTR2 975 aa13.99□□□□□ -0.17
CDH1-210ENST00000566612 STRN4Q9NRL3 753 aa13.99□□□□□ -0.17
CDH1-210ENST00000566612 MAP3K4Q9Y6R4 1608 aa13.99□□□□□ -0.17
CDH1-210ENST00000566612 CWC22Q9HCG8 908 aaKnown RBP13.99□□□□□ -0.17
CDH1-210ENST00000566612 MCM2P49736 904 aa13.98□□□□□ -0.17
CDH1-210ENST00000566612 CSPP1Q1MSJ5 1256 aa13.98□□□□□ -0.17
CDH1-210ENST00000566612 TTC21AQ8NDW8 1320 aa13.98□□□□□ -0.17
CDH1-210ENST00000566612 KIF1BPQ96EK5 621 aa13.98□□□□□ -0.17
CDH1-210ENST00000566612 CHL1O00533 1208 aa13.98□□□□□ -0.17
CDH1-210ENST00000566612 FIBPO43427 364 aa13.98□□□□□ -0.17
CDH1-210ENST00000566612 PDE1AP54750 535 aa13.98□□□□□ -0.17
CDH1-210ENST00000566612 MPNDQ8N594 471 aa13.97□□□□□ -0.17
CDH1-210ENST00000566612 ANO8Q9HCE9 1232 aaPredicted RBP13.97□□□□□ -0.17
CDH1-210ENST00000566612 TOMM22Q9NS69 142 aa13.97□□□□□ -0.17
CDH1-210ENST00000566612 CHPF2Q9P2E5 772 aa13.97□□□□□ -0.17
CDH1-210ENST00000566612 SPHKAPQ2M3C7 1700 aa13.97□□□□□ -0.17
CDH1-210ENST00000566612 ABCC3O15438 1527 aa13.97□□□□□ -0.17
CDH1-210ENST00000566612 CABP4P57796 275 aa13.96□□□□□ -0.17
CDH1-210ENST00000566612 SHROOM2Q13796 1616 aa13.96□□□□□ -0.17
CDH1-210ENST00000566612 RNF17Q9BXT8 1623 aaKnown RBP13.96□□□□□ -0.17
CDH1-210ENST00000566612 JARID2Q92833 1246 aaPredicted RBP13.96□□□□□ -0.17
CDH1-210ENST00000566612 PHAXQ9H814 394 aaKnown RBP13.96□□□□□ -0.17
CDH1-210ENST00000566612 FLT4P35916 1363 aa13.96□□□□□ -0.17
CDH1-210ENST00000566612 CCDC8Q9H0W5 538 aaPredicted RBP13.96□□□□□ -0.17
CDH1-210ENST00000566612 SPG7Q9UQ90 795 aa13.96□□□□□ -0.17
CDH1-210ENST00000566612 STK3Q13188 491 aa13.95□□□□□ -0.18
CDH1-210ENST00000566612 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.95□□□□□ -0.18
CDH1-210ENST00000566612 TOM1L2Q6ZVM7 507 aa13.95□□□□□ -0.18
CDH1-210ENST00000566612 ERC1Q8IUD2 1116 aa13.95□□□□□ -0.18
CDH1-210ENST00000566612 DBF4Q9UBU7 674 aaPredicted RBP13.95□□□□□ -0.18
CDH1-210ENST00000566612 HTATSF1O43719 755 aaKnown RBP13.95□□□□□ -0.18
CDH1-210ENST00000566612 NCBP3Q53F19 620 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms