RNA–Protein interactions for RNA: ENST00000566480.5

SCAMP2-207, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 2,476 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-207ENST00000566480 HDAC1Q13547 482 aaPredicted RBP15.48■□□□□ 0.07
SCAMP2-207ENST00000566480 PIK3C2AO00443 1686 aa15.48■□□□□ 0.07
SCAMP2-207ENST00000566480 PLCB2Q00722 1185 aa15.48■□□□□ 0.07
SCAMP2-207ENST00000566480 ZNF428Q96B54 188 aa15.48■□□□□ 0.07
SCAMP2-207ENST00000566480 FLT4P35916 1363 aa15.47■□□□□ 0.07
SCAMP2-207ENST00000566480 ZBTB7BO15156 539 aaPredicted RBP15.47■□□□□ 0.07
SCAMP2-207ENST00000566480 PROSER2Q86WR7 435 aaPredicted RBP15.46■□□□□ 0.07
SCAMP2-207ENST00000566480 SBNO1A3KN83 1393 aa15.46■□□□□ 0.07
SCAMP2-207ENST00000566480 ZBTB7CA1YPR0 619 aa15.46■□□□□ 0.07
SCAMP2-207ENST00000566480 BRPF1P55201 1214 aaPredicted RBP15.46■□□□□ 0.07
SCAMP2-207ENST00000566480 LNPKQ9C0E8 428 aa15.46■□□□□ 0.07
SCAMP2-207ENST00000566480 VIRMAQ69YN4 1812 aaKnown RBP15.45■□□□□ 0.06
SCAMP2-207ENST00000566480 USHBP1Q8N6Y0 703 aa15.45■□□□□ 0.06
SCAMP2-207ENST00000566480 CHL1O00533 1208 aa15.44■□□□□ 0.06
SCAMP2-207ENST00000566480 SMC5Q8IY18 1101 aa15.44■□□□□ 0.06
SCAMP2-207ENST00000566480 RGPD1P0DJD0 1748 aa15.44■□□□□ 0.06
SCAMP2-207ENST00000566480 XPCQ01831 940 aaPredicted RBP15.44■□□□□ 0.06
SCAMP2-207ENST00000566480 ESCO1Q5FWF5 840 aa15.44■□□□□ 0.06
SCAMP2-207ENST00000566480 PHF8Q9UPP1 1060 aa15.44■□□□□ 0.06
SCAMP2-207ENST00000566480 HOXC9P31274 260 aa15.43■□□□□ 0.06
SCAMP2-207ENST00000566480 RTF1Q92541 710 aaKnown RBP15.43■□□□□ 0.06
SCAMP2-207ENST00000566480 ARHGAP45Q92619 1136 aa15.43■□□□□ 0.06
SCAMP2-207ENST00000566480 FMN2Q9NZ56 1722 aa15.43■□□□□ 0.06
SCAMP2-207ENST00000566480 PIK3R4Q99570 1358 aa15.43■□□□□ 0.06
SCAMP2-207ENST00000566480 ABCC4O15439 1325 aa15.43■□□□□ 0.06
SCAMP2-207ENST00000566480 ARHGEF10O15013 1369 aa15.42■□□□□ 0.06
SCAMP2-207ENST00000566480 PIP4K2BP78356 416 aa15.42■□□□□ 0.06
SCAMP2-207ENST00000566480 SIRT2Q8IXJ6 389 aa15.42■□□□□ 0.06
SCAMP2-207ENST00000566480 IGSF1Q8N6C5 1336 aa15.42■□□□□ 0.06
SCAMP2-207ENST00000566480 RTL5Q5HYW3 569 aaPredicted RBP15.41■□□□□ 0.06
SCAMP2-207ENST00000566480 ANKARQ7Z5J8 1434 aa15.41■□□□□ 0.06
SCAMP2-207ENST00000566480 TSPYL4Q9UJ04 414 aa15.41■□□□□ 0.06
SCAMP2-207ENST00000566480 ANKRD45Q5TZF3 282 aa15.41■□□□□ 0.06
SCAMP2-207ENST00000566480 CRB1P82279 1406 aa15.4■□□□□ 0.06
SCAMP2-207ENST00000566480 NUCB1Q02818 461 aa15.4■□□□□ 0.06
SCAMP2-207ENST00000566480 PSME1Q06323 249 aa15.4■□□□□ 0.06
SCAMP2-207ENST00000566480 NECTIN2Q92692 538 aa15.4■□□□□ 0.06
SCAMP2-207ENST00000566480 API5Q9BZZ5 524 aaKnown RBP15.4■□□□□ 0.06
SCAMP2-207ENST00000566480 UBAP1LF5GYI3 381 aa15.39■□□□□ 0.05
SCAMP2-207ENST00000566480 SLC4A2P04920 1241 aa15.39■□□□□ 0.05
SCAMP2-207ENST00000566480 ORAI2Q96SN7 254 aa15.39■□□□□ 0.05
SCAMP2-207ENST00000566480 KDRP35968 1356 aa15.39■□□□□ 0.05
SCAMP2-207ENST00000566480 MFAP1P55081 439 aaKnown RBP15.39■□□□□ 0.05
SCAMP2-207ENST00000566480 CHD1LQ86WJ1 897 aa15.39■□□□□ 0.05
SCAMP2-207ENST00000566480 MARF1Q9Y4F3 1742 aaKnown RBP15.38■□□□□ 0.05
SCAMP2-207ENST00000566480 LMOD2Q6P5Q4 547 aa15.38■□□□□ 0.05
SCAMP2-207ENST00000566480 ILDR1Q86SU0 546 aaPredicted RBP15.38■□□□□ 0.05
SCAMP2-207ENST00000566480 DEKP35659 375 aaKnown RBP15.38■□□□□ 0.05
SCAMP2-207ENST00000566480 G2E3Q7L622 706 aa15.38■□□□□ 0.05
SCAMP2-207ENST00000566480 DDX17Q92841 729 aaKnown RBP15.37■□□□□ 0.05
SCAMP2-207ENST00000566480 UPF2Q9HAU5 1272 aaKnown RBP15.37■□□□□ 0.05
SCAMP2-207ENST00000566480 F6X3S4 739 aa15.37■□□□□ 0.05
SCAMP2-207ENST00000566480 GAS2L2Q8NHY3 880 aa15.37■□□□□ 0.05
SCAMP2-207ENST00000566480 ROBO1Q9Y6N7 1651 aa15.36■□□□□ 0.05
SCAMP2-207ENST00000566480 HAP1P54257 671 aaPredicted RBP15.36■□□□□ 0.05
SCAMP2-207ENST00000566480 SLC4A10Q6U841 1118 aa15.36■□□□□ 0.05
SCAMP2-207ENST00000566480 TBC1D32Q96NH3 1257 aa15.36■□□□□ 0.05
SCAMP2-207ENST00000566480 RGS12O14924 1447 aa15.35■□□□□ 0.05
SCAMP2-207ENST00000566480 GNAT3A8MTJ3 354 aa15.35■□□□□ 0.05
SCAMP2-207ENST00000566480 IL17REQ8NFR9 667 aa15.35■□□□□ 0.05
SCAMP2-207ENST00000566480 KIAA0232Q92628 1395 aa15.34■□□□□ 0.05
SCAMP2-207ENST00000566480 APBB1O00213 710 aa15.34■□□□□ 0.05
SCAMP2-207ENST00000566480 LRRC59Q96AG4 307 aaKnown RBP15.34■□□□□ 0.05
SCAMP2-207ENST00000566480 MEIS3Q99687 375 aa15.34■□□□□ 0.05
SCAMP2-207ENST00000566480 MSH6P52701 1360 aa15.34■□□□□ 0.05
SCAMP2-207ENST00000566480 NBPF6Q5VWK0 638 aa15.34■□□□□ 0.05
SCAMP2-207ENST00000566480 NBPF4Q96M43 638 aa15.34■□□□□ 0.05
SCAMP2-207ENST00000566480 ADGRL3Q9HAR2 1447 aa15.34■□□□□ 0.05
SCAMP2-207ENST00000566480 INTS3Q68E01 1043 aaKnown RBP15.33■□□□□ 0.04
SCAMP2-207ENST00000566480 SLKQ9H2G2 1235 aaPredicted RBP15.33■□□□□ 0.04
SCAMP2-207ENST00000566480 CHMP4BQ9H444 224 aaKnown RBP15.33■□□□□ 0.04
SCAMP2-207ENST00000566480 GCC1Q96CN9 775 aa15.33■□□□□ 0.04
SCAMP2-207ENST00000566480 NFKBIBQ15653 356 aa15.32■□□□□ 0.04
SCAMP2-207ENST00000566480 SPRYD3Q8NCJ5 442 aa15.32■□□□□ 0.04
SCAMP2-207ENST00000566480 LTN1O94822 1766 aa15.32■□□□□ 0.04
SCAMP2-207ENST00000566480 C22orf23Q9BZE7 217 aa15.31■□□□□ 0.04
SCAMP2-207ENST00000566480 C16orf71Q8IYS4 520 aaPredicted RBP15.31■□□□□ 0.04
SCAMP2-207ENST00000566480 IP6K1Q92551 441 aa15.31■□□□□ 0.04
SCAMP2-207ENST00000566480 MST1RQ04912 1400 aa15.3■□□□□ 0.04
SCAMP2-207ENST00000566480 MAP3K5Q99683 1374 aa15.3■□□□□ 0.04
SCAMP2-207ENST00000566480 PTPRCP08575 1304 aa15.29■□□□□ 0.04
SCAMP2-207ENST00000566480 TBC1D2Q9BYX2 928 aa15.29■□□□□ 0.04
SCAMP2-207ENST00000566480 LGR6Q9HBX8 967 aa15.29■□□□□ 0.04
SCAMP2-207ENST00000566480 SMARCA5O60264 1052 aaPredicted RBP15.28■□□□□ 0.04
SCAMP2-207ENST00000566480 CEP85Q6P2H3 762 aa15.28■□□□□ 0.04
SCAMP2-207ENST00000566480 GCP02774 474 aa15.28■□□□□ 0.04
SCAMP2-207ENST00000566480 BECN1Q14457 450 aa15.28■□□□□ 0.04
SCAMP2-207ENST00000566480 OTUD7AQ8TE49 926 aaPredicted RBP15.28■□□□□ 0.04
SCAMP2-207ENST00000566480 STK31Q9BXU1 1019 aa15.28■□□□□ 0.04
SCAMP2-207ENST00000566480 KIF24Q5T7B8 1368 aa15.28■□□□□ 0.04
SCAMP2-207ENST00000566480 ATP10DQ9P241 1426 aa15.28■□□□□ 0.04
SCAMP2-207ENST00000566480 FKBP5Q13451 457 aaPredicted RBP15.27■□□□□ 0.04
SCAMP2-207ENST00000566480 HOMEZQ8IX15 550 aa15.27■□□□□ 0.04
SCAMP2-207ENST00000566480 RTL1A6NKG5 1358 aa15.27■□□□□ 0.04
SCAMP2-207ENST00000566480 RGPD2P0DJD1 1756 aa15.27■□□□□ 0.04
SCAMP2-207ENST00000566480 FRAT2O75474 233 aaPredicted RBP15.27■□□□□ 0.03
SCAMP2-207ENST00000566480 TAF7Q15545 349 aaPredicted RBP15.27■□□□□ 0.03
SCAMP2-207ENST00000566480 FBXO41Q8TF61 875 aa15.27■□□□□ 0.03
SCAMP2-207ENST00000566480 NFAT5O94916 1531 aa15.26■□□□□ 0.03
SCAMP2-207ENST00000566480 FLIIQ13045 1269 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms