RNA–Protein interactions for RNA: ENST00000566200.1

ABCA3-204, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 3

Gene ABCA3, Length 1,232 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-204ENST00000566200 NBPF4Q96M43 638 aa26.35■■□□□ 1.81
ABCA3-204ENST00000566200 TUBGCP6Q96RT7 1819 aa26.35■■□□□ 1.81
ABCA3-204ENST00000566200 PRIM1P49642 420 aaKnown RBP26.33■■□□□ 1.81
ABCA3-204ENST00000566200 ZCRB1Q8TBF4 217 aaKnown RBP26.33■■□□□ 1.81
ABCA3-204ENST00000566200 AKT1S1Q96B36 256 aa26.33■■□□□ 1.81
ABCA3-204ENST00000566200 USHBP1Q8N6Y0 703 aa26.32■■□□□ 1.8
ABCA3-204ENST00000566200 CARD14Q9BXL6 1004 aa26.32■■□□□ 1.8
ABCA3-204ENST00000566200 FHDC1Q9C0D6 1143 aaPredicted RBP26.32■■□□□ 1.8
ABCA3-204ENST00000566200 KCNQ4P56696 695 aa26.3■■□□□ 1.8
ABCA3-204ENST00000566200 SLC27A3Q5K4L6 730 aa26.3■■□□□ 1.8
ABCA3-204ENST00000566200 SYT17Q9BSW7 474 aa26.3■■□□□ 1.8
ABCA3-204ENST00000566200 COL24A1Q17RW2 1714 aa26.3■■□□□ 1.8
ABCA3-204ENST00000566200 HSP90AB2PQ58FF8 381 aa26.29■■□□□ 1.8
ABCA3-204ENST00000566200 SYTL4Q96C24 671 aaPredicted RBP26.29■■□□□ 1.8
ABCA3-204ENST00000566200 INSRP06213 1382 aa26.29■■□□□ 1.8
ABCA3-204ENST00000566200 CDCA8Q53HL2 280 aa26.28■■□□□ 1.8
ABCA3-204ENST00000566200 DCAF8L1A6NGE4 600 aa26.27■■□□□ 1.8
ABCA3-204ENST00000566200 SMG6Q86US8 1419 aaKnown RBP26.27■■□□□ 1.8
ABCA3-204ENST00000566200 NSD3Q9BZ95 1437 aa26.26■■□□□ 1.79
ABCA3-204ENST00000566200 FLT4P35916 1363 aa26.26■■□□□ 1.79
ABCA3-204ENST00000566200 ANKRD26Q9UPS8 1709 aa26.25■■□□□ 1.79
ABCA3-204ENST00000566200 KIF24Q5T7B8 1368 aa26.25■■□□□ 1.79
ABCA3-204ENST00000566200 CGNL1Q0VF96 1302 aa26.25■■□□□ 1.79
ABCA3-204ENST00000566200 PNPLA7Q6ZV29 1317 aa26.25■■□□□ 1.79
ABCA3-204ENST00000566200 ARXQ96QS3 562 aa26.25■■□□□ 1.79
ABCA3-204ENST00000566200 RAPGEF4Q8WZA2 1011 aa26.23■■□□□ 1.79
ABCA3-204ENST00000566200 MAP3K5Q99683 1374 aa26.22■■□□□ 1.79
ABCA3-204ENST00000566200 TIMELESSQ9UNS1 1208 aa26.22■■□□□ 1.79
ABCA3-204ENST00000566200 EMILIN1Q9Y6C2 1016 aa26.22■■□□□ 1.79
ABCA3-204ENST00000566200 TOGARAM1Q9Y4F4 1720 aa26.22■■□□□ 1.79
ABCA3-204ENST00000566200 PKD1L3Q7Z443 1732 aa26.21■■□□□ 1.79
ABCA3-204ENST00000566200 UTRNP46939 3433 aa26.2■■□□□ 1.79
ABCA3-204ENST00000566200 TATP17735 454 aaPredicted RBP26.2■■□□□ 1.78
ABCA3-204ENST00000566200 NCAPD2Q15021 1401 aa26.2■■□□□ 1.78
ABCA3-204ENST00000566200 SLC16A10Q8TF71 515 aa26.19■■□□□ 1.78
ABCA3-204ENST00000566200 TFCP2L1Q9NZI6 479 aa26.18■■□□□ 1.78
ABCA3-204ENST00000566200 CCNL1Q9UK58 526 aaPredicted RBP26.18■■□□□ 1.78
ABCA3-204ENST00000566200 MAP2P11137 1827 aaKnown RBP26.18■■□□□ 1.78
ABCA3-204ENST00000566200 PCDH11XQ9BZA7 1347 aa26.17■■□□□ 1.78
ABCA3-204ENST00000566200 PCDH11YQ9BZA8 1340 aa26.17■■□□□ 1.78
ABCA3-204ENST00000566200 ITGB4P16144 1822 aa26.17■■□□□ 1.78
ABCA3-204ENST00000566200 C5P01031 1676 aa26.17■■□□□ 1.78
ABCA3-204ENST00000566200 CYP27B1O15528 508 aa26.16■■□□□ 1.78
ABCA3-204ENST00000566200 CLSPNQ9HAW4 1339 aa26.15■■□□□ 1.78
ABCA3-204ENST00000566200 TAF1LQ8IZX4 1826 aa26.15■■□□□ 1.78
ABCA3-204ENST00000566200 CHD4Q14839 1912 aa26.13■■□□□ 1.77
ABCA3-204ENST00000566200 PCGF6Q9BYE7 350 aa26.12■■□□□ 1.77
ABCA3-204ENST00000566200 WASHC2AQ641Q2 1341 aa26.11■■□□□ 1.77
ABCA3-204ENST00000566200 PPM1GO15355 546 aaPredicted RBP26.1■■□□□ 1.77
ABCA3-204ENST00000566200 COL23A1Q86Y22 540 aaPredicted RBP26.1■■□□□ 1.77
ABCA3-204ENST00000566200 PALLDQ8WX93 1383 aa26.09■■□□□ 1.77
ABCA3-204ENST00000566200 POLD1P28340 1107 aa26.09■■□□□ 1.77
ABCA3-204ENST00000566200 MPRIPQ6WCQ1 1025 aa26.08■■□□□ 1.77
ABCA3-204ENST00000566200 EYA1Q99502 592 aa26.08■■□□□ 1.77
ABCA3-204ENST00000566200 POLKQ9UBT6 870 aa26.08■■□□□ 1.77
ABCA3-204ENST00000566200 KLHL34Q8N239 644 aa26.06■■□□□ 1.76
ABCA3-204ENST00000566200 ZNF784Q8NCA9 323 aaPredicted RBP26.06■■□□□ 1.76
ABCA3-204ENST00000566200 C4BP0C0L5 1744 aa26.05■■□□□ 1.76
ABCA3-204ENST00000566200 NKX1-1Q15270 411 aaPredicted RBP26.05■■□□□ 1.76
ABCA3-204ENST00000566200 NLGN2Q8NFZ4 835 aa26.05■■□□□ 1.76
ABCA3-204ENST00000566200 POLR3GLQ9BT43 218 aa26.04■■□□□ 1.76
ABCA3-204ENST00000566200 MSH5O43196 834 aa26.03■■□□□ 1.76
ABCA3-204ENST00000566200 PIGBQ92521 554 aa26.03■■□□□ 1.76
ABCA3-204ENST00000566200 UBR3Q6ZT12 1888 aa26.02■■□□□ 1.76
ABCA3-204ENST00000566200 HSPA5P11021 654 aaKnown RBP26.01■■□□□ 1.75
ABCA3-204ENST00000566200 GPR162Q16538 588 aa26.01■■□□□ 1.75
ABCA3-204ENST00000566200 MSL1Q68DK7 614 aa26.01■■□□□ 1.75
ABCA3-204ENST00000566200 AMIGO3Q86WK7 504 aa26.01■■□□□ 1.75
ABCA3-204ENST00000566200 SPG7Q9UQ90 795 aa26.01■■□□□ 1.75
ABCA3-204ENST00000566200 TNNT2P45379 298 aaPredicted RBP26■■□□□ 1.75
ABCA3-204ENST00000566200 EIF4A2Q14240 407 aaKnown RBP26■■□□□ 1.75
ABCA3-204ENST00000566200 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26■■□□□ 1.75
ABCA3-204ENST00000566200 GOLGB1Q14789 3259 aaKnown RBP25.99■■□□□ 1.75
ABCA3-204ENST00000566200 SMARCC1Q92922 1105 aaPredicted RBP25.99■■□□□ 1.75
ABCA3-204ENST00000566200 EIF4G2P78344 907 aaKnown RBP eCLIP25.98■■□□□ 1.75
ABCA3-204ENST00000566200 PHKG2P15735 406 aa25.97■■□□□ 1.75
ABCA3-204ENST00000566200 SMIM5Q71RC9 77 aa25.96■■□□□ 1.75
ABCA3-204ENST00000566200 PANK3Q9H999 370 aa25.96■■□□□ 1.75
ABCA3-204ENST00000566200 PELP1Q8IZL8 1130 aaKnown RBP25.94■■□□□ 1.74
ABCA3-204ENST00000566200 FLAD1Q8NFF5 587 aa25.94■■□□□ 1.74
ABCA3-204ENST00000566200 IGSF1Q8N6C5 1336 aa25.93■■□□□ 1.74
ABCA3-204ENST00000566200 YBX3P16989 372 aaKnown RBP eCLIP25.93■■□□□ 1.74
ABCA3-204ENST00000566200 IFNL2Q8IZJ0 200 aa25.93■■□□□ 1.74
ABCA3-204ENST00000566200 ASAP1Q9ULH1 1129 aa25.93■■□□□ 1.74
ABCA3-204ENST00000566200 LOC102724428A0A0B4J2F2 783 aa25.92■■□□□ 1.74
ABCA3-204ENST00000566200 SIK1P57059 783 aa25.92■■□□□ 1.74
ABCA3-204ENST00000566200 LINC00116Q8NCU8 138 aa25.92■■□□□ 1.74
ABCA3-204ENST00000566200 AK7Q96M32 723 aa25.92■■□□□ 1.74
ABCA3-204ENST00000566200 TMOD3Q9NYL9 352 aa25.92■■□□□ 1.74
ABCA3-204ENST00000566200 PLEKHG2Q9H7P9 1386 aa25.92■■□□□ 1.74
ABCA3-204ENST00000566200 HMGB2P26583 209 aaKnown RBP25.91■■□□□ 1.74
ABCA3-204ENST00000566200 ITPK1Q13572 414 aa25.9■■□□□ 1.74
ABCA3-204ENST00000566200 PHF14O94880 888 aa25.89■■□□□ 1.74
ABCA3-204ENST00000566200 ATG3Q9NT62 314 aa25.89■■□□□ 1.74
ABCA3-204ENST00000566200 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.88■■□□□ 1.73
ABCA3-204ENST00000566200 KDRP35968 1356 aa25.87■■□□□ 1.73
ABCA3-204ENST00000566200 CD2APQ9Y5K6 639 aa25.87■■□□□ 1.73
ABCA3-204ENST00000566200 SSFA2P28290 1259 aa25.86■■□□□ 1.73
ABCA3-204ENST00000566200 ZNF831Q5JPB2 1677 aa25.86■■□□□ 1.73
ABCA3-204ENST00000566200 CCER1Q8TC90 406 aaPredicted RBP25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms