RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 DDX54Q8TDD1 881 aaKnown RBP18.13■□□□□ 0.49
RNF40-208ENST00000565995 SENP3-EIF4A1A0A087X0R7 540 aa18.12■□□□□ 0.49
RNF40-208ENST00000565995 CARD11Q9BXL7 1154 aa18.12■□□□□ 0.49
RNF40-208ENST00000565995 TFCP2L1Q9NZI6 479 aa18.12■□□□□ 0.49
RNF40-208ENST00000565995 PRIM1P49642 420 aaKnown RBP18.11■□□□□ 0.49
RNF40-208ENST00000565995 HOXC9P31274 260 aa18.1■□□□□ 0.49
RNF40-208ENST00000565995 UBR3Q6ZT12 1888 aa18.09■□□□□ 0.49
RNF40-208ENST00000565995 ZCRB1Q8TBF4 217 aaKnown RBP18.09■□□□□ 0.49
RNF40-208ENST00000565995 MEGF6O75095 1541 aa18.08■□□□□ 0.49
RNF40-208ENST00000565995 MAP3K19Q56UN5 1328 aa18.08■□□□□ 0.49
RNF40-208ENST00000565995 KIF20BQ96Q89 1820 aa18.08■□□□□ 0.48
RNF40-208ENST00000565995 NLGN2Q8NFZ4 835 aa18.08■□□□□ 0.48
RNF40-208ENST00000565995 CGNL1Q0VF96 1302 aa18.07■□□□□ 0.48
RNF40-208ENST00000565995 KCNQ4P56696 695 aa18.07■□□□□ 0.48
RNF40-208ENST00000565995 RTL1A6NKG5 1358 aa18.06■□□□□ 0.48
RNF40-208ENST00000565995 GRIN3BO60391 1043 aa18.06■□□□□ 0.48
RNF40-208ENST00000565995 GIGYF1O75420 1035 aaPredicted RBP18.06■□□□□ 0.48
RNF40-208ENST00000565995 LTV1Q96GA3 475 aaPredicted RBP18.06■□□□□ 0.48
RNF40-208ENST00000565995 COG3Q96JB2 828 aa18.06■□□□□ 0.48
RNF40-208ENST00000565995 TESK2Q96S53 571 aa18.06■□□□□ 0.48
RNF40-208ENST00000565995 MAP2P11137 1827 aaKnown RBP18.05■□□□□ 0.48
RNF40-208ENST00000565995 SLC24A1O60721 1099 aa18.05■□□□□ 0.48
RNF40-208ENST00000565995 HMGB2P26583 209 aaKnown RBP18.05■□□□□ 0.48
RNF40-208ENST00000565995 COL23A1Q86Y22 540 aaPredicted RBP18.05■□□□□ 0.48
RNF40-208ENST00000565995 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
RNF40-208ENST00000565995 CCNL1Q9UK58 526 aaPredicted RBP18.05■□□□□ 0.48
RNF40-208ENST00000565995 PKD1L3Q7Z443 1732 aa18.05■□□□□ 0.48
RNF40-208ENST00000565995 TOGARAM1Q9Y4F4 1720 aa18.05■□□□□ 0.48
RNF40-208ENST00000565995 YBX3P16989 372 aaKnown RBP eCLIP18.04■□□□□ 0.48
RNF40-208ENST00000565995 USP47Q96K76 1375 aa18.04■□□□□ 0.48
RNF40-208ENST00000565995 C4BP0C0L5 1744 aa18.03■□□□□ 0.48
RNF40-208ENST00000565995 AMPHP49418 695 aa18.03■□□□□ 0.48
RNF40-208ENST00000565995 KLHL34Q8N239 644 aa18.03■□□□□ 0.48
RNF40-208ENST00000565995 FBLN1P23142 703 aa18.02■□□□□ 0.48
RNF40-208ENST00000565995 NBPF6Q5VWK0 638 aa18.02■□□□□ 0.48
RNF40-208ENST00000565995 NBPF4Q96M43 638 aa18.02■□□□□ 0.48
RNF40-208ENST00000565995 PELP1Q8IZL8 1130 aaKnown RBP18.01■□□□□ 0.47
RNF40-208ENST00000565995 CD2APQ9Y5K6 639 aa18.01■□□□□ 0.47
RNF40-208ENST00000565995 FLAD1Q8NFF5 587 aa18■□□□□ 0.47
RNF40-208ENST00000565995 ANKRD26Q9UPS8 1709 aa18■□□□□ 0.47
RNF40-208ENST00000565995 KIF13BQ9NQT8 1826 aa18■□□□□ 0.47
RNF40-208ENST00000565995 KIF24Q5T7B8 1368 aa17.99■□□□□ 0.47
RNF40-208ENST00000565995 ST20-MTHFSA0A0A6YYL1 179 aa17.98■□□□□ 0.47
RNF40-208ENST00000565995 FYB1O15117 783 aa17.98■□□□□ 0.47
RNF40-208ENST00000565995 INSRP06213 1382 aa17.97■□□□□ 0.47
RNF40-208ENST00000565995 IFFO2Q5TF58 517 aa17.97■□□□□ 0.47
RNF40-208ENST00000565995 SMG6Q86US8 1419 aaKnown RBP17.97■□□□□ 0.47
RNF40-208ENST00000565995 ADCY9O60503 1353 aa17.96■□□□□ 0.47
RNF40-208ENST00000565995 RRS1Q15050 365 aaKnown RBP17.96■□□□□ 0.47
RNF40-208ENST00000565995 RAPGEF4Q8WZA2 1011 aa17.96■□□□□ 0.47
RNF40-208ENST00000565995 PCDH11XQ9BZA7 1347 aa17.96■□□□□ 0.46
RNF40-208ENST00000565995 PCDH11YQ9BZA8 1340 aa17.96■□□□□ 0.46
RNF40-208ENST00000565995 TONSLQ96HA7 1378 aa17.95■□□□□ 0.46
RNF40-208ENST00000565995 MSH5O43196 834 aa17.95■□□□□ 0.46
RNF40-208ENST00000565995 TATP17735 454 aaPredicted RBP17.95■□□□□ 0.46
RNF40-208ENST00000565995 NCAPD2Q15021 1401 aa17.95■□□□□ 0.46
RNF40-208ENST00000565995 ATP10DQ9P241 1426 aa17.95■□□□□ 0.46
RNF40-208ENST00000565995 PALLDQ8WX93 1383 aa17.94■□□□□ 0.46
RNF40-208ENST00000565995 KIAA1551Q9HCM1 1747 aa17.94■□□□□ 0.46
RNF40-208ENST00000565995 ZNF831Q5JPB2 1677 aa17.93■□□□□ 0.46
RNF40-208ENST00000565995 USHBP1Q8N6Y0 703 aa17.93■□□□□ 0.46
RNF40-208ENST00000565995 FLT4P35916 1363 aa17.92■□□□□ 0.46
RNF40-208ENST00000565995 CYP27B1O15528 508 aa17.92■□□□□ 0.46
RNF40-208ENST00000565995 NKX1-1Q15270 411 aaPredicted RBP17.92■□□□□ 0.46
RNF40-208ENST00000565995 HSP90AB2PQ58FF8 381 aa17.92■□□□□ 0.46
RNF40-208ENST00000565995 MSL1Q68DK7 614 aa17.92■□□□□ 0.46
RNF40-208ENST00000565995 SMARCC1Q92922 1105 aaPredicted RBP17.92■□□□□ 0.46
RNF40-208ENST00000565995 GGNBP2Q9H3C7 697 aa17.92■□□□□ 0.46
RNF40-208ENST00000565995 BRCA1P38398 1863 aaKnown RBP17.92■□□□□ 0.46
RNF40-208ENST00000565995 CICQ96RK0 1608 aaPredicted RBP17.91■□□□□ 0.46
RNF40-208ENST00000565995 NSD3Q9BZ95 1437 aa17.91■□□□□ 0.46
RNF40-208ENST00000565995 N4BP2Q86UW6 1770 aaPredicted RBP17.9■□□□□ 0.46
RNF40-208ENST00000565995 MPRIPQ6WCQ1 1025 aa17.9■□□□□ 0.46
RNF40-208ENST00000565995 AMIGO3Q86WK7 504 aa17.89■□□□□ 0.45
RNF40-208ENST00000565995 GPBP1L1Q9HC44 474 aaPredicted RBP17.89■□□□□ 0.45
RNF40-208ENST00000565995 COL5A3P25940 1745 aaPredicted RBP17.88■□□□□ 0.45
RNF40-208ENST00000565995 ARFGEF1Q9Y6D6 1849 aa17.87■□□□□ 0.45
RNF40-208ENST00000565995 SSFA2P28290 1259 aa17.87■□□□□ 0.45
RNF40-208ENST00000565995 TMF1P82094 1093 aa17.87■□□□□ 0.45
RNF40-208ENST00000565995 PIGBQ92521 554 aa17.87■□□□□ 0.45
RNF40-208ENST00000565995 HSPA6P17066 643 aa17.86■□□□□ 0.45
RNF40-208ENST00000565995 AK7Q96M32 723 aa17.86■□□□□ 0.45
RNF40-208ENST00000565995 MYH14Q7Z406 1995 aaKnown RBP17.85■□□□□ 0.45
RNF40-208ENST00000565995 IGSF1Q8N6C5 1336 aa17.85■□□□□ 0.45
RNF40-208ENST00000565995 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.85■□□□□ 0.453e-14■□□□□ 9.3
RNF40-208ENST00000565995 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.84■□□□□ 0.45
RNF40-208ENST00000565995 LOC102724428A0A0B4J2F2 783 aa17.83■□□□□ 0.44
RNF40-208ENST00000565995 SIK1P57059 783 aa17.83■□□□□ 0.44
RNF40-208ENST00000565995 SPG7Q9UQ90 795 aa17.83■□□□□ 0.44
RNF40-208ENST00000565995 PLEKHG2Q9H7P9 1386 aa17.82■□□□□ 0.44
RNF40-208ENST00000565995 WASHC2AQ641Q2 1341 aa17.82■□□□□ 0.44
RNF40-208ENST00000565995 CDCA8Q53HL2 280 aa17.82■□□□□ 0.44
RNF40-208ENST00000565995 LINC00116Q8NCU8 138 aa17.82■□□□□ 0.44
RNF40-208ENST00000565995 CARD14Q9BXL6 1004 aa17.82■□□□□ 0.44
RNF40-208ENST00000565995 SBF1O95248 1867 aa17.82■□□□□ 0.44
RNF40-208ENST00000565995 C4AP0C0L4 1744 aa17.81■□□□□ 0.44
RNF40-208ENST00000565995 EMILIN1Q9Y6C2 1016 aa17.81■□□□□ 0.44
RNF40-208ENST00000565995 KIF3CO14782 793 aa17.8■□□□□ 0.44
RNF40-208ENST00000565995 VIRMAQ69YN4 1812 aaKnown RBP17.79■□□□□ 0.44
RNF40-208ENST00000565995 PHF14O94880 888 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms