RNA–Protein interactions for RNA: ENST00000565248.1

THUMPD1-203, Transcript of THUMP domain containing 1, humanhuman

TSL 3

Gene THUMPD1, Length 1,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-203ENST00000565248 BCL9O00512 1426 aa21.78■■□□□ 1.08
THUMPD1-203ENST00000565248 WNK3Q9BYP7 1800 aa21.78■■□□□ 1.08
THUMPD1-203ENST00000565248 SLIT3O75094 1523 aa21.77■■□□□ 1.08
THUMPD1-203ENST00000565248 CENPBP07199 599 aaPredicted RBP21.77■■□□□ 1.08
THUMPD1-203ENST00000565248 MARCH10Q8NA82 808 aaPredicted RBP21.77■■□□□ 1.08
THUMPD1-203ENST00000565248 PDGFDQ9GZP0 370 aaPredicted RBP21.77■■□□□ 1.08
THUMPD1-203ENST00000565248 PROM2Q8N271 834 aa21.76■■□□□ 1.07
THUMPD1-203ENST00000565248 EXOC5O00471 708 aa21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 SOX12O15370 315 aa21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 DIAPH1O60610 1272 aaKnown RBP21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 CSB-PGBD3P0DP91 1061 aa21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 PTGER2P43116 358 aa21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 HNRNPUQ00839 825 aaKnown RBP eCLIP21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 RRS1Q15050 365 aaKnown RBP21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 SLC15A2Q16348 729 aa21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 TXNRD1Q16881 649 aa21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 PTF1AQ7RTS3 328 aa21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 EMILIN1Q9Y6C2 1016 aa21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 UTRNP46939 3433 aa21.75■■□□□ 1.07
THUMPD1-203ENST00000565248 SYT17Q9BSW7 474 aa21.74■■□□□ 1.07
THUMPD1-203ENST00000565248 MTFR1LQ9H019 292 aa21.74■■□□□ 1.07
THUMPD1-203ENST00000565248 COL18A1P39060 1754 aa21.74■■□□□ 1.07
THUMPD1-203ENST00000565248 KIF24Q5T7B8 1368 aa21.74■■□□□ 1.07
THUMPD1-203ENST00000565248 MAP2P11137 1827 aaKnown RBP21.73■■□□□ 1.07
THUMPD1-203ENST00000565248 CHD4Q14839 1912 aa21.73■■□□□ 1.07
THUMPD1-203ENST00000565248 CARD10Q9BWT7 1032 aa21.73■■□□□ 1.07
THUMPD1-203ENST00000565248 FHDC1Q9C0D6 1143 aaPredicted RBP21.73■■□□□ 1.07
THUMPD1-203ENST00000565248 AXIN2Q9Y2T1 843 aa21.73■■□□□ 1.07
THUMPD1-203ENST00000565248 FBLN1P23142 703 aa21.72■■□□□ 1.07
THUMPD1-203ENST00000565248 COL3A1P02461 1466 aaPredicted RBP21.71■■□□□ 1.07
THUMPD1-203ENST00000565248 AMPHP49418 695 aa21.71■■□□□ 1.07
THUMPD1-203ENST00000565248 ADAMTS8Q9UP79 889 aa21.71■■□□□ 1.07
THUMPD1-203ENST00000565248 FLT4P35916 1363 aa21.71■■□□□ 1.07
THUMPD1-203ENST00000565248 ARHGEF25Q86VW2 580 aa21.7■■□□□ 1.06
THUMPD1-203ENST00000565248 MAP3K19Q56UN5 1328 aa21.7■■□□□ 1.06
THUMPD1-203ENST00000565248 RTL1A6NKG5 1358 aa21.69■■□□□ 1.06
THUMPD1-203ENST00000565248 RGPD5Q99666 1765 aa21.69■■□□□ 1.06
THUMPD1-203ENST00000565248 SENP3-EIF4A1A0A087X0R7 540 aa21.68■■□□□ 1.06
THUMPD1-203ENST00000565248 U2SURPO15042 1029 aaKnown RBP21.68■■□□□ 1.06
THUMPD1-203ENST00000565248 U2AF1L5P0DN76 240 aaPredicted RBP21.68■■□□□ 1.06
THUMPD1-203ENST00000565248 U2AF1Q01081 240 aaKnown RBP eCLIP21.68■■□□□ 1.06
THUMPD1-203ENST00000565248 PNNQ9H307 717 aaKnown RBP21.68■■□□□ 1.06
THUMPD1-203ENST00000565248 NFAT5O94916 1531 aa21.67■■□□□ 1.06
THUMPD1-203ENST00000565248 ARXQ96QS3 562 aa21.66■■□□□ 1.06
THUMPD1-203ENST00000565248 C1QTNF8P60827 252 aa21.65■■□□□ 1.06
THUMPD1-203ENST00000565248 SGIP1Q9BQI5 828 aa21.64■■□□□ 1.05
THUMPD1-203ENST00000565248 ZBED9Q6R2W3 1325 aa21.63■■□□□ 1.05
THUMPD1-203ENST00000565248 IL13P35225 146 aa21.63■■□□□ 1.05
THUMPD1-203ENST00000565248 TNS2Q63HR2 1409 aa21.63■■□□□ 1.05
THUMPD1-203ENST00000565248 NHSQ6T4R5 1651 aa21.63■■□□□ 1.05
THUMPD1-203ENST00000565248 NEFMP07197 916 aa21.62■■□□□ 1.05
THUMPD1-203ENST00000565248 HOXC9P31274 260 aa21.62■■□□□ 1.05
THUMPD1-203ENST00000565248 GPR162Q16538 588 aa21.61■■□□□ 1.05
THUMPD1-203ENST00000565248 HSP90AB2PQ58FF8 381 aa21.61■■□□□ 1.05
THUMPD1-203ENST00000565248 NGEFQ8N5V2 710 aa21.61■■□□□ 1.05
THUMPD1-203ENST00000565248 IP6K1Q92551 441 aa21.61■■□□□ 1.05
THUMPD1-203ENST00000565248 RUNDC1Q96C34 613 aa21.61■■□□□ 1.05
THUMPD1-203ENST00000565248 MAP3K5Q99683 1374 aa21.61■■□□□ 1.05
THUMPD1-203ENST00000565248 ABCC6O95255 1503 aa21.6■■□□□ 1.05
THUMPD1-203ENST00000565248 EIF4A2Q14240 407 aaKnown RBP21.6■■□□□ 1.05
THUMPD1-203ENST00000565248 ACSBG1Q96GR2 724 aa21.6■■□□□ 1.05
THUMPD1-203ENST00000565248 KAT6BQ8WYB5 2073 aa21.59■■□□□ 1.05
THUMPD1-203ENST00000565248 FCHSD2O94868 740 aa21.59■■□□□ 1.05
THUMPD1-203ENST00000565248 CCDC146Q8IYE0 955 aa21.59■■□□□ 1.05
THUMPD1-203ENST00000565248 LTN1O94822 1766 aa21.59■■□□□ 1.05
THUMPD1-203ENST00000565248 MAPK8IP3Q9UPT6 1336 aa21.58■■□□□ 1.05
THUMPD1-203ENST00000565248 NLRP2Q9NX02 1062 aa21.57■■□□□ 1.04
THUMPD1-203ENST00000565248 IL2RBP14784 551 aa21.55■■□□□ 1.04
THUMPD1-203ENST00000565248 POLD1P28340 1107 aa21.55■■□□□ 1.04
THUMPD1-203ENST00000565248 SLC16A10Q8TF71 515 aa21.55■■□□□ 1.04
THUMPD1-203ENST00000565248 BTAF1O14981 1849 aa21.55■■□□□ 1.04
THUMPD1-203ENST00000565248 APAF1O14727 1248 aa21.54■■□□□ 1.04
THUMPD1-203ENST00000565248 GIGYF1O75420 1035 aaPredicted RBP21.54■■□□□ 1.04
THUMPD1-203ENST00000565248 PAPPAQ13219 1627 aa21.54■■□□□ 1.04
THUMPD1-203ENST00000565248 KLHL34Q8N239 644 aa21.53■■□□□ 1.04
THUMPD1-203ENST00000565248 ERBB3P21860 1342 aa21.53■■□□□ 1.04
THUMPD1-203ENST00000565248 HMOX1P09601 288 aa21.52■■□□□ 1.04
THUMPD1-203ENST00000565248 LTV1Q96GA3 475 aaPredicted RBP21.52■■□□□ 1.04
THUMPD1-203ENST00000565248 RSPH6AQ9H0K4 717 aa21.52■■□□□ 1.04
THUMPD1-203ENST00000565248 PRKAR2BP31323 418 aa21.51■■□□□ 1.03
THUMPD1-203ENST00000565248 ZNF827Q17R98 1081 aa21.51■■□□□ 1.03
THUMPD1-203ENST00000565248 NCBP3Q53F19 620 aaKnown RBP21.51■■□□□ 1.03
THUMPD1-203ENST00000565248 SLC27A3Q5K4L6 730 aa21.51■■□□□ 1.03
THUMPD1-203ENST00000565248 PELP1Q8IZL8 1130 aaKnown RBP21.51■■□□□ 1.03
THUMPD1-203ENST00000565248 SULT6B1Q6IMI4 303 aa21.5■■□□□ 1.03
THUMPD1-203ENST00000565248 SALL2Q9Y467 1007 aaPredicted RBP21.5■■□□□ 1.03
THUMPD1-203ENST00000565248 IGSF1Q8N6C5 1336 aa21.5■■□□□ 1.03
THUMPD1-203ENST00000565248 PLEKHF1Q96S99 279 aa21.49■■□□□ 1.03
THUMPD1-203ENST00000565248 LRRC4BQ9NT99 713 aa21.49■■□□□ 1.03
THUMPD1-203ENST00000565248 ANKRD24Q8TF21 1146 aa21.48■■□□□ 1.03
THUMPD1-203ENST00000565248 EYA1Q99502 592 aa21.48■■□□□ 1.03
THUMPD1-203ENST00000565248 QSER1Q2KHR3 1735 aa21.48■■□□□ 1.03
THUMPD1-203ENST00000565248 GOLGB1Q14789 3259 aaKnown RBP21.47■■□□□ 1.03
THUMPD1-203ENST00000565248 AKT1S1Q96B36 256 aa21.47■■□□□ 1.03
THUMPD1-203ENST00000565248 TFCP2L1Q9NZI6 479 aa21.47■■□□□ 1.03
THUMPD1-203ENST00000565248 KDRP35968 1356 aa21.46■■□□□ 1.03
THUMPD1-203ENST00000565248 IFFO2Q5TF58 517 aa21.45■■□□□ 1.02
THUMPD1-203ENST00000565248 CCDC27Q2M243 656 aa21.44■■□□□ 1.02
THUMPD1-203ENST00000565248 DDX54Q8TDD1 881 aaKnown RBP21.44■■□□□ 1.02
THUMPD1-203ENST00000565248 GRIN3BO60391 1043 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms