RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 TXNRD1Q16881 649 aa17.47■□□□□ 0.39
HERC2-206ENST00000564519 PROM2Q8N271 834 aa17.47■□□□□ 0.39
HERC2-206ENST00000564519 POLKQ9UBT6 870 aa17.47■□□□□ 0.39
HERC2-206ENST00000564519 SMG6Q86US8 1419 aaKnown RBP17.47■□□□□ 0.39
HERC2-206ENST00000564519 RGPD2P0DJD1 1756 aa17.46■□□□□ 0.39
HERC2-206ENST00000564519 ATF5Q9Y2D1 282 aaPredicted RBP17.45■□□□□ 0.38
HERC2-206ENST00000564519 ZCRB1Q8TBF4 217 aaKnown RBP17.44■□□□□ 0.38
HERC2-206ENST00000564519 WASHC2AQ641Q2 1341 aa17.44■□□□□ 0.38
HERC2-206ENST00000564519 SLC15A2Q16348 729 aa17.43■□□□□ 0.38
HERC2-206ENST00000564519 RGPD3A6NKT7 1758 aaPredicted RBP17.42■□□□□ 0.38
HERC2-206ENST00000564519 RGPD4Q7Z3J3 1758 aa17.42■□□□□ 0.38
HERC2-206ENST00000564519 NHSQ6T4R5 1651 aa17.42■□□□□ 0.38
HERC2-206ENST00000564519 RAPGEF4Q8WZA2 1011 aa17.41■□□□□ 0.38
HERC2-206ENST00000564519 PDGFDQ9GZP0 370 aaPredicted RBP17.41■□□□□ 0.38
HERC2-206ENST00000564519 ANKRD26Q9UPS8 1709 aa17.41■□□□□ 0.38
HERC2-206ENST00000564519 NSD2O96028 1365 aa17.4■□□□□ 0.38
HERC2-206ENST00000564519 TATP17735 454 aaPredicted RBP17.4■□□□□ 0.38
HERC2-206ENST00000564519 EYA1Q99502 592 aa17.4■□□□□ 0.38
HERC2-206ENST00000564519 MTFR1LQ9H019 292 aa17.4■□□□□ 0.38
HERC2-206ENST00000564519 KNSTRNQ9Y448 316 aa17.4■□□□□ 0.38
HERC2-206ENST00000564519 SHANK3Q9BYB0 1731 aa17.39■□□□□ 0.37
HERC2-206ENST00000564519 EIF4A2Q14240 407 aaKnown RBP17.39■□□□□ 0.37
HERC2-206ENST00000564519 AMER1Q5JTC6 1135 aaPredicted RBP17.39■□□□□ 0.37
HERC2-206ENST00000564519 MORC1Q86VD1 984 aa17.39■□□□□ 0.37
HERC2-206ENST00000564519 NCAPD2Q15021 1401 aa17.38■□□□□ 0.37
HERC2-206ENST00000564519 PRIM1P49642 420 aaKnown RBP17.38■□□□□ 0.37
HERC2-206ENST00000564519 PTGER2P43116 358 aa17.37■□□□□ 0.37
HERC2-206ENST00000564519 SYTL4Q96C24 671 aaPredicted RBP17.37■□□□□ 0.37
HERC2-206ENST00000564519 PER1O15534 1290 aaPredicted RBP17.36■□□□□ 0.37
HERC2-206ENST00000564519 FHDC1Q9C0D6 1143 aaPredicted RBP17.36■□□□□ 0.37
HERC2-206ENST00000564519 CYP27B1O15528 508 aa17.35■□□□□ 0.37
HERC2-206ENST00000564519 SYT17Q9BSW7 474 aa17.35■□□□□ 0.37
HERC2-206ENST00000564519 MAP2P11137 1827 aaKnown RBP17.35■□□□□ 0.37
HERC2-206ENST00000564519 PCDH11XQ9BZA7 1347 aa17.34■□□□□ 0.37
HERC2-206ENST00000564519 PCDH11YQ9BZA8 1340 aa17.34■□□□□ 0.37
HERC2-206ENST00000564519 LRRC4BQ9NT99 713 aa17.34■□□□□ 0.37
HERC2-206ENST00000564519 BTAF1O14981 1849 aa17.33■□□□□ 0.37
HERC2-206ENST00000564519 CASZ1Q86V15 1759 aa17.33■□□□□ 0.37
HERC2-206ENST00000564519 ARXQ96QS3 562 aa17.33■□□□□ 0.36
HERC2-206ENST00000564519 DOT1LQ8TEK3 1739 aa17.33■□□□□ 0.36
HERC2-206ENST00000564519 CC2D1BQ5T0F9 858 aaKnown RBP17.32■□□□□ 0.36
HERC2-206ENST00000564519 IGSF1Q8N6C5 1336 aa17.31■□□□□ 0.36
HERC2-206ENST00000564519 KCNQ4P56696 695 aa17.31■□□□□ 0.36
HERC2-206ENST00000564519 POLD1P28340 1107 aa17.3■□□□□ 0.36
HERC2-206ENST00000564519 ZNF827Q17R98 1081 aa17.3■□□□□ 0.36
HERC2-206ENST00000564519 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
HERC2-206ENST00000564519 KLHL34Q8N239 644 aa17.3■□□□□ 0.36
HERC2-206ENST00000564519 CNGB1Q14028 1251 aaPredicted RBP17.29■□□□□ 0.36
HERC2-206ENST00000564519 SPG7Q9UQ90 795 aa17.29■□□□□ 0.36
HERC2-206ENST00000564519 PAPPAQ13219 1627 aa17.29■□□□□ 0.36
HERC2-206ENST00000564519 PKD1L3Q7Z443 1732 aa17.28■□□□□ 0.36
HERC2-206ENST00000564519 GPR162Q16538 588 aa17.28■□□□□ 0.36
HERC2-206ENST00000564519 AEBP1Q8IUX7 1158 aa17.28■□□□□ 0.36
HERC2-206ENST00000564519 TFCP2L1Q9NZI6 479 aa17.28■□□□□ 0.36
HERC2-206ENST00000564519 IL13P35225 146 aa17.27■□□□□ 0.36
HERC2-206ENST00000564519 NKX1-1Q15270 411 aaPredicted RBP17.27■□□□□ 0.36
HERC2-206ENST00000564519 MPRIPQ6WCQ1 1025 aa17.27■□□□□ 0.36
HERC2-206ENST00000564519 ZNF784Q8NCA9 323 aaPredicted RBP17.27■□□□□ 0.36
HERC2-206ENST00000564519 SLC16A10Q8TF71 515 aa17.27■□□□□ 0.36
HERC2-206ENST00000564519 SGIP1Q9BQI5 828 aa17.27■□□□□ 0.36
HERC2-206ENST00000564519 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.27■□□□□ 0.362e-7■■■■■ 34
HERC2-206ENST00000564519 PHKG2P15735 406 aa17.26■□□□□ 0.35
HERC2-206ENST00000564519 MTHFSP49914 203 aa17.26■□□□□ 0.35
HERC2-206ENST00000564519 AKT1S1Q96B36 256 aa17.26■□□□□ 0.35
HERC2-206ENST00000564519 TOGARAM1Q9Y4F4 1720 aa17.25■□□□□ 0.35
HERC2-206ENST00000564519 PELP1Q8IZL8 1130 aaKnown RBP17.25■□□□□ 0.35
HERC2-206ENST00000564519 IFNL2Q8IZJ0 200 aa17.24■□□□□ 0.35
HERC2-206ENST00000564519 PIGBQ92521 554 aa17.24■□□□□ 0.35
HERC2-206ENST00000564519 CCNL1Q9UK58 526 aaPredicted RBP17.24■□□□□ 0.35
HERC2-206ENST00000564519 MSH5O43196 834 aa17.23■□□□□ 0.35
HERC2-206ENST00000564519 SULT6B1Q6IMI4 303 aa17.23■□□□□ 0.35
HERC2-206ENST00000564519 NPC1L1Q9UHC9 1359 aa17.23■□□□□ 0.35
HERC2-206ENST00000564519 UTRNP46939 3433 aa17.22■□□□□ 0.35
HERC2-206ENST00000564519 PALLDQ8WX93 1383 aa17.22■□□□□ 0.35
HERC2-206ENST00000564519 MAP3K5Q99683 1374 aa17.22■□□□□ 0.35
HERC2-206ENST00000564519 KAT6BQ8WYB5 2073 aa17.21■□□□□ 0.35
HERC2-206ENST00000564519 HMGB2P26583 209 aaKnown RBP17.21■□□□□ 0.35
HERC2-206ENST00000564519 LY75O60449 1722 aa17.21■□□□□ 0.35
HERC2-206ENST00000564519 KDRP35968 1356 aa17.2■□□□□ 0.34
HERC2-206ENST00000564519 PLEKHG2Q9H7P9 1386 aa17.2■□□□□ 0.34
HERC2-206ENST00000564519 PLEKHO1Q53GL0 409 aaPredicted RBP17.2■□□□□ 0.34
HERC2-206ENST00000564519 PNPLA7Q6ZV29 1317 aa17.2■□□□□ 0.34
HERC2-206ENST00000564519 ZNF530Q6P9A1 599 aaPredicted RBP17.19■□□□□ 0.34
HERC2-206ENST00000564519 HMOX1P09601 288 aa17.18■□□□□ 0.34
HERC2-206ENST00000564519 AMOTQ4VCS5 1084 aa17.18■□□□□ 0.34
HERC2-206ENST00000564519 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
HERC2-206ENST00000564519 SENP3-EIF4A1A0A087X0R7 540 aa17.17■□□□□ 0.34
HERC2-206ENST00000564519 KDM6AO15550 1401 aaPredicted RBP17.17■□□□□ 0.34
HERC2-206ENST00000564519 DIAPH1O60610 1272 aaKnown RBP17.17■□□□□ 0.34
HERC2-206ENST00000564519 SMARCC1Q92922 1105 aaPredicted RBP17.17■□□□□ 0.34
HERC2-206ENST00000564519 ASAP1Q9ULH1 1129 aa17.17■□□□□ 0.34
HERC2-206ENST00000564519 COL3A1P02461 1466 aaPredicted RBP17.17■□□□□ 0.34
HERC2-206ENST00000564519 ITGB4P16144 1822 aa17.15■□□□□ 0.34
HERC2-206ENST00000564519 HSP90AB1P08238 724 aaKnown RBP17.15■□□□□ 0.34
HERC2-206ENST00000564519 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
HERC2-206ENST00000564519 ATG3Q9NT62 314 aa17.15■□□□□ 0.34
HERC2-206ENST00000564519 LOC102724428A0A0B4J2F2 783 aa17.14■□□□□ 0.33
HERC2-206ENST00000564519 SIK1P57059 783 aa17.14■□□□□ 0.33
HERC2-206ENST00000564519 C1QTNF8P60827 252 aa17.14■□□□□ 0.33
HERC2-206ENST00000564519 COL23A1Q86Y22 540 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms