RNA–Protein interactions for RNA: ENST00000564396.5

KLHDC4-212, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-212ENST00000564396 DDX54Q8TDD1 881 aaKnown RBP20.27■□□□□ 0.84
KLHDC4-212ENST00000564396 SYT17Q9BSW7 474 aa20.27■□□□□ 0.84
KLHDC4-212ENST00000564396 MAP3K5Q99683 1374 aa20.26■□□□□ 0.83
KLHDC4-212ENST00000564396 PKD1L3Q7Z443 1732 aa20.25■□□□□ 0.83
KLHDC4-212ENST00000564396 TOGARAM1Q9Y4F4 1720 aa20.25■□□□□ 0.83
KLHDC4-212ENST00000564396 AMPHP49418 695 aa20.25■□□□□ 0.83
KLHDC4-212ENST00000564396 RRS1Q15050 365 aaKnown RBP20.25■□□□□ 0.83
KLHDC4-212ENST00000564396 TMF1P82094 1093 aa20.24■□□□□ 0.83
KLHDC4-212ENST00000564396 SLC27A3Q5K4L6 730 aa20.24■□□□□ 0.83
KLHDC4-212ENST00000564396 NBPF6Q5VWK0 638 aa20.24■□□□□ 0.83
KLHDC4-212ENST00000564396 NBPF4Q96M43 638 aa20.24■□□□□ 0.83
KLHDC4-212ENST00000564396 GGNBP2Q9H3C7 697 aa20.24■□□□□ 0.83
KLHDC4-212ENST00000564396 TAF1LQ8IZX4 1826 aa20.24■□□□□ 0.83
KLHDC4-212ENST00000564396 GOLGB1Q14789 3259 aaKnown RBP20.24■□□□□ 0.83
KLHDC4-212ENST00000564396 C5P01031 1676 aa20.23■□□□□ 0.83
KLHDC4-212ENST00000564396 PNPLA7Q6ZV29 1317 aa20.23■□□□□ 0.83
KLHDC4-212ENST00000564396 ITGB4P16144 1822 aa20.23■□□□□ 0.83
KLHDC4-212ENST00000564396 PRIM1P49642 420 aaKnown RBP20.22■□□□□ 0.83
KLHDC4-212ENST00000564396 ZCRB1Q8TBF4 217 aaKnown RBP20.22■□□□□ 0.83
KLHDC4-212ENST00000564396 INSRP06213 1382 aa20.21■□□□□ 0.83
KLHDC4-212ENST00000564396 DCAF8L1A6NGE4 600 aa20.21■□□□□ 0.83
KLHDC4-212ENST00000564396 NCAPD2Q15021 1401 aa20.2■□□□□ 0.82
KLHDC4-212ENST00000564396 KCNQ4P56696 695 aa20.2■□□□□ 0.82
KLHDC4-212ENST00000564396 ARXQ96QS3 562 aa20.2■□□□□ 0.82
KLHDC4-212ENST00000564396 KIF24Q5T7B8 1368 aa20.2■□□□□ 0.82
KLHDC4-212ENST00000564396 TRIM26Q12899 539 aaPredicted RBP20.19■□□□□ 0.82
KLHDC4-212ENST00000564396 USHBP1Q8N6Y0 703 aa20.19■□□□□ 0.82
KLHDC4-212ENST00000564396 CGNL1Q0VF96 1302 aa20.19■□□□□ 0.82
KLHDC4-212ENST00000564396 SMG6Q86US8 1419 aaKnown RBP20.19■□□□□ 0.82
KLHDC4-212ENST00000564396 MAP2P11137 1827 aaKnown RBP20.18■□□□□ 0.82
KLHDC4-212ENST00000564396 HSP90AB2PQ58FF8 381 aa20.18■□□□□ 0.82
KLHDC4-212ENST00000564396 SYTL4Q96C24 671 aaPredicted RBP20.18■□□□□ 0.82
KLHDC4-212ENST00000564396 CARD14Q9BXL6 1004 aa20.18■□□□□ 0.82
KLHDC4-212ENST00000564396 FLT4P35916 1363 aa20.18■□□□□ 0.82
KLHDC4-212ENST00000564396 SLC16A10Q8TF71 515 aa20.17■□□□□ 0.82
KLHDC4-212ENST00000564396 NSD3Q9BZ95 1437 aa20.16■□□□□ 0.82
KLHDC4-212ENST00000564396 CDCA8Q53HL2 280 aa20.13■□□□□ 0.81
KLHDC4-212ENST00000564396 PCDH11XQ9BZA7 1347 aa20.12■□□□□ 0.81
KLHDC4-212ENST00000564396 PCDH11YQ9BZA8 1340 aa20.12■□□□□ 0.81
KLHDC4-212ENST00000564396 RAPGEF4Q8WZA2 1011 aa20.12■□□□□ 0.81
KLHDC4-212ENST00000564396 TFCP2L1Q9NZI6 479 aa20.12■□□□□ 0.81
KLHDC4-212ENST00000564396 CCNL1Q9UK58 526 aaPredicted RBP20.12■□□□□ 0.81
KLHDC4-212ENST00000564396 EMILIN1Q9Y6C2 1016 aa20.12■□□□□ 0.81
KLHDC4-212ENST00000564396 C4BP0C0L5 1744 aa20.12■□□□□ 0.81
KLHDC4-212ENST00000564396 UBR3Q6ZT12 1888 aa20.11■□□□□ 0.81
KLHDC4-212ENST00000564396 CYP27B1O15528 508 aa20.11■□□□□ 0.81
KLHDC4-212ENST00000564396 TATP17735 454 aaPredicted RBP20.11■□□□□ 0.81
KLHDC4-212ENST00000564396 ZNF784Q8NCA9 323 aaPredicted RBP20.11■□□□□ 0.81
KLHDC4-212ENST00000564396 COL23A1Q86Y22 540 aaPredicted RBP20.08■□□□□ 0.81
KLHDC4-212ENST00000564396 PALLDQ8WX93 1383 aa20.08■□□□□ 0.8
KLHDC4-212ENST00000564396 POLD1P28340 1107 aa20.07■□□□□ 0.8
KLHDC4-212ENST00000564396 NLGN2Q8NFZ4 835 aa20.07■□□□□ 0.8
KLHDC4-212ENST00000564396 TIMELESSQ9UNS1 1208 aa20.07■□□□□ 0.8
KLHDC4-212ENST00000564396 WASHC2AQ641Q2 1341 aa20.05■□□□□ 0.8
KLHDC4-212ENST00000564396 NKX1-1Q15270 411 aaPredicted RBP20.04■□□□□ 0.8
KLHDC4-212ENST00000564396 CLSPNQ9HAW4 1339 aa20.03■□□□□ 0.8
KLHDC4-212ENST00000564396 AMIGO3Q86WK7 504 aa20.03■□□□□ 0.8
KLHDC4-212ENST00000564396 MPRIPQ6WCQ1 1025 aa20.02■□□□□ 0.8
KLHDC4-212ENST00000564396 KLHL34Q8N239 644 aa20.01■□□□□ 0.79
KLHDC4-212ENST00000564396 EYA1Q99502 592 aa20.01■□□□□ 0.79
KLHDC4-212ENST00000564396 POLKQ9UBT6 870 aa20.01■□□□□ 0.79
KLHDC4-212ENST00000564396 ZNF831Q5JPB2 1677 aa20■□□□□ 0.79
KLHDC4-212ENST00000564396 GPR162Q16538 588 aa20■□□□□ 0.79
KLHDC4-212ENST00000564396 PIGBQ92521 554 aa20■□□□□ 0.79
KLHDC4-212ENST00000564396 PLEKHG2Q9H7P9 1386 aa19.99■□□□□ 0.79
KLHDC4-212ENST00000564396 MSL1Q68DK7 614 aa19.99■□□□□ 0.79
KLHDC4-212ENST00000564396 PPM1GO15355 546 aaPredicted RBP19.98■□□□□ 0.79
KLHDC4-212ENST00000564396 YBX3P16989 372 aaKnown RBP eCLIP19.98■□□□□ 0.79
KLHDC4-212ENST00000564396 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.98■□□□□ 0.79
KLHDC4-212ENST00000564396 COL5A3P25940 1745 aaPredicted RBP19.98■□□□□ 0.79
KLHDC4-212ENST00000564396 SMARCC1Q92922 1105 aaPredicted RBP19.97■□□□□ 0.79
KLHDC4-212ENST00000564396 MSH5O43196 834 aa19.96■□□□□ 0.79
KLHDC4-212ENST00000564396 SPG7Q9UQ90 795 aa19.96■□□□□ 0.79
KLHDC4-212ENST00000564396 PHKG2P15735 406 aa19.95■□□□□ 0.78
KLHDC4-212ENST00000564396 EIF4A2Q14240 407 aaKnown RBP19.95■□□□□ 0.78
KLHDC4-212ENST00000564396 FLAD1Q8NFF5 587 aa19.95■□□□□ 0.78
KLHDC4-212ENST00000564396 KIAA1551Q9HCM1 1747 aa19.95■□□□□ 0.78
KLHDC4-212ENST00000564396 SMIM5Q71RC9 77 aa19.94■□□□□ 0.78
KLHDC4-212ENST00000564396 LINC00116Q8NCU8 138 aa19.94■□□□□ 0.78
KLHDC4-212ENST00000564396 KIF13BQ9NQT8 1826 aa19.94■□□□□ 0.78
KLHDC4-212ENST00000564396 IGSF1Q8N6C5 1336 aa19.94■□□□□ 0.78
KLHDC4-212ENST00000564396 KDRP35968 1356 aa19.94■□□□□ 0.78
KLHDC4-212ENST00000564396 PELP1Q8IZL8 1130 aaKnown RBP19.93■□□□□ 0.78
KLHDC4-212ENST00000564396 LOC102724428A0A0B4J2F2 783 aa19.92■□□□□ 0.78
KLHDC4-212ENST00000564396 HMGB2P26583 209 aaKnown RBP19.92■□□□□ 0.78
KLHDC4-212ENST00000564396 SIK1P57059 783 aa19.92■□□□□ 0.78
KLHDC4-212ENST00000564396 ITPK1Q13572 414 aa19.92■□□□□ 0.78
KLHDC4-212ENST00000564396 ASAP1Q9ULH1 1129 aa19.92■□□□□ 0.78
KLHDC4-212ENST00000564396 CD2APQ9Y5K6 639 aa19.92■□□□□ 0.78
KLHDC4-212ENST00000564396 IFNL2Q8IZJ0 200 aa19.91■□□□□ 0.78
KLHDC4-212ENST00000564396 AK7Q96M32 723 aa19.91■□□□□ 0.78
KLHDC4-212ENST00000564396 HSPA5P11021 654 aaKnown RBP19.9■□□□□ 0.78
KLHDC4-212ENST00000564396 SSFA2P28290 1259 aa19.9■□□□□ 0.78
KLHDC4-212ENST00000564396 C1QTNF8P60827 252 aa19.9■□□□□ 0.78
KLHDC4-212ENST00000564396 TMOD3Q9NYL9 352 aa19.9■□□□□ 0.78
KLHDC4-212ENST00000564396 CICQ96RK0 1608 aaPredicted RBP19.9■□□□□ 0.78
KLHDC4-212ENST00000564396 C4AP0C0L4 1744 aa19.9■□□□□ 0.78
KLHDC4-212ENST00000564396 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.89■□□□□ 0.77
KLHDC4-212ENST00000564396 KDM6AO15550 1401 aaPredicted RBP19.89■□□□□ 0.77
KLHDC4-212ENST00000564396 ATG3Q9NT62 314 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms