RNA–Protein interactions for RNA: ENST00000563009.5

EDC3-206, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 3

Gene EDC3, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-206ENST00000563009 SULT6B1Q6IMI4 303 aa20.46■□□□□ 0.87
EDC3-206ENST00000563009 AEBP1Q8IUX7 1158 aa20.46■□□□□ 0.87
EDC3-206ENST00000563009 ANP32CO43423 234 aa20.44■□□□□ 0.86
EDC3-206ENST00000563009 MARCH10Q8NA82 808 aaPredicted RBP20.44■□□□□ 0.86
EDC3-206ENST00000563009 ZCRB1Q8TBF4 217 aaKnown RBP20.44■□□□□ 0.86
EDC3-206ENST00000563009 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.44■□□□□ 0.862e-7■■□□□ 14.4
EDC3-206ENST00000563009 NUDCQ9Y266 331 aa20.44■□□□□ 0.86
EDC3-206ENST00000563009 BCL9O00512 1426 aa20.44■□□□□ 0.86
EDC3-206ENST00000563009 U2SURPO15042 1029 aaKnown RBP20.42■□□□□ 0.86
EDC3-206ENST00000563009 FAM182BQ5T319 152 aa20.42■□□□□ 0.86
EDC3-206ENST00000563009 HMOX1P09601 288 aa20.41■□□□□ 0.86
EDC3-206ENST00000563009 FAM196AQ6ZSG2 479 aa20.41■□□□□ 0.86
EDC3-206ENST00000563009 PCDH11XQ9BZA7 1347 aa20.39■□□□□ 0.85
EDC3-206ENST00000563009 PCDH11YQ9BZA8 1340 aa20.39■□□□□ 0.85
EDC3-206ENST00000563009 SPG7Q9UQ90 795 aa20.39■□□□□ 0.85
EDC3-206ENST00000563009 DDX54Q8TDD1 881 aaKnown RBP20.38■□□□□ 0.85
EDC3-206ENST00000563009 SBF2Q86WG5 1849 aa20.37■□□□□ 0.85
EDC3-206ENST00000563009 CYP27B1O15528 508 aa20.37■□□□□ 0.85
EDC3-206ENST00000563009 U2AF1L5P0DN76 240 aaPredicted RBP20.37■□□□□ 0.85
EDC3-206ENST00000563009 U2AF1Q01081 240 aaKnown RBP eCLIP20.37■□□□□ 0.85
EDC3-206ENST00000563009 AMOTQ4VCS5 1084 aa20.37■□□□□ 0.85
EDC3-206ENST00000563009 RSPH6AQ9H0K4 717 aa20.37■□□□□ 0.85
EDC3-206ENST00000563009 FCHSD2O94868 740 aa20.36■□□□□ 0.85
EDC3-206ENST00000563009 PLEKHO1Q53GL0 409 aaPredicted RBP20.36■□□□□ 0.85
EDC3-206ENST00000563009 UPF1Q92900 1129 aaKnown RBP eCLIP20.36■□□□□ 0.85
EDC3-206ENST00000563009 NKX1-1Q15270 411 aaPredicted RBP20.33■□□□□ 0.85
EDC3-206ENST00000563009 CCDC125Q86Z20 511 aa20.33■□□□□ 0.85
EDC3-206ENST00000563009 TNS1Q9HBL0 1735 aaKnown RBP20.33■□□□□ 0.84
EDC3-206ENST00000563009 NHSQ6T4R5 1651 aa20.32■□□□□ 0.84
EDC3-206ENST00000563009 PHKG2P15735 406 aa20.32■□□□□ 0.84
EDC3-206ENST00000563009 PRKAR2BP31323 418 aa20.32■□□□□ 0.84
EDC3-206ENST00000563009 CCDC184Q52MB2 194 aa20.32■□□□□ 0.84
EDC3-206ENST00000563009 IFNL2Q8IZJ0 200 aa20.32■□□□□ 0.84
EDC3-206ENST00000563009 DOT1LQ8TEK3 1739 aa20.3■□□□□ 0.84
EDC3-206ENST00000563009 TRIM37O94972 964 aa20.3■□□□□ 0.84
EDC3-206ENST00000563009 ZNF530Q6P9A1 599 aaPredicted RBP20.3■□□□□ 0.84
EDC3-206ENST00000563009 MTHFSDQ2M296 383 aaKnown RBP20.29■□□□□ 0.84
EDC3-206ENST00000563009 DIEXFQ68CQ4 756 aaKnown RBP20.29■□□□□ 0.84
EDC3-206ENST00000563009 PHACTR3Q96KR7 559 aa20.29■□□□□ 0.84
EDC3-206ENST00000563009 PLEKHF1Q96S99 279 aa20.29■□□□□ 0.84
EDC3-206ENST00000563009 BCL11BQ9C0K0 894 aaPredicted RBP20.29■□□□□ 0.84
EDC3-206ENST00000563009 TOGARAM1Q9Y4F4 1720 aa20.29■□□□□ 0.84
EDC3-206ENST00000563009 WDR43Q15061 677 aaKnown RBP eCLIP20.28■□□□□ 0.84
EDC3-206ENST00000563009 HSP90AB1P08238 724 aaKnown RBP20.27■□□□□ 0.84
EDC3-206ENST00000563009 AKAP4Q5JQC9 854 aa20.27■□□□□ 0.84
EDC3-206ENST00000563009 C1orf141Q5JVX7 400 aa20.27■□□□□ 0.84
EDC3-206ENST00000563009 ACSBG1Q96GR2 724 aa20.27■□□□□ 0.84
EDC3-206ENST00000563009 PNNQ9H307 717 aaKnown RBP20.27■□□□□ 0.84
EDC3-206ENST00000563009 KCNQ2O43526 872 aa20.26■□□□□ 0.83
EDC3-206ENST00000563009 PTF1AQ7RTS3 328 aa20.26■□□□□ 0.83
EDC3-206ENST00000563009 GAS2L2Q8NHY3 880 aa20.26■□□□□ 0.83
EDC3-206ENST00000563009 DCAF5Q96JK2 942 aa20.26■□□□□ 0.83
EDC3-206ENST00000563009 MRS2Q9HD23 443 aa20.26■□□□□ 0.83
EDC3-206ENST00000563009 KDM6AO15550 1401 aaPredicted RBP20.26■□□□□ 0.83
EDC3-206ENST00000563009 SF3B2Q13435 895 aaKnown RBP20.25■□□□□ 0.83
EDC3-206ENST00000563009 ADAMTS8Q9UP79 889 aa20.25■□□□□ 0.83
EDC3-206ENST00000563009 ADAMTS7Q9UKP4 1686 aa20.25■□□□□ 0.83
EDC3-206ENST00000563009 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
EDC3-206ENST00000563009 PNISRQ8TF01 805 aaKnown RBP20.24■□□□□ 0.83
EDC3-206ENST00000563009 BTAF1O14981 1849 aa20.24■□□□□ 0.83
EDC3-206ENST00000563009 ITGB4P16144 1822 aa20.24■□□□□ 0.83
EDC3-206ENST00000563009 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
EDC3-206ENST00000563009 KAT6BQ8WYB5 2073 aa20.23■□□□□ 0.83
EDC3-206ENST00000563009 MAP3K5Q99683 1374 aa20.22■□□□□ 0.83
EDC3-206ENST00000563009 RGPD3A6NKT7 1758 aaPredicted RBP20.22■□□□□ 0.83
EDC3-206ENST00000563009 RGPD4Q7Z3J3 1758 aa20.22■□□□□ 0.83
EDC3-206ENST00000563009 NEFMP07197 916 aa20.22■□□□□ 0.83
EDC3-206ENST00000563009 VIRMAQ69YN4 1812 aaKnown RBP20.21■□□□□ 0.83
EDC3-206ENST00000563009 ERVV-2B6SEH9 535 aa20.21■□□□□ 0.83
EDC3-206ENST00000563009 APBA3O96018 575 aa20.21■□□□□ 0.83
EDC3-206ENST00000563009 MPRIPQ6WCQ1 1025 aa20.21■□□□□ 0.83
EDC3-206ENST00000563009 GNAT3A8MTJ3 354 aa20.2■□□□□ 0.82
EDC3-206ENST00000563009 BAG6P46379 1132 aa20.2■□□□□ 0.82
EDC3-206ENST00000563009 SYTL4Q96C24 671 aaPredicted RBP20.2■□□□□ 0.82
EDC3-206ENST00000563009 MAPK8IP3Q9UPT6 1336 aa20.2■□□□□ 0.82
EDC3-206ENST00000563009 MRC1P22897 1456 aa20.19■□□□□ 0.82
EDC3-206ENST00000563009 CCER2I3L3R5 266 aa20.19■□□□□ 0.82
EDC3-206ENST00000563009 PLSCR1O15162 318 aa20.19■□□□□ 0.82
EDC3-206ENST00000563009 DEFB132Q7Z7B7 95 aa20.19■□□□□ 0.82
EDC3-206ENST00000563009 RUNDC1Q96C34 613 aa20.19■□□□□ 0.82
EDC3-206ENST00000563009 RNMTO43148 476 aaKnown RBP20.18■□□□□ 0.82
EDC3-206ENST00000563009 NFE2L2Q16236 605 aa20.18■□□□□ 0.82
EDC3-206ENST00000563009 LGR6Q9HBX8 967 aa20.18■□□□□ 0.82
EDC3-206ENST00000563009 DLG5Q8TDM6 1919 aa20.17■□□□□ 0.82
EDC3-206ENST00000563009 EN1Q05925 392 aaPredicted RBP20.17■□□□□ 0.82
EDC3-206ENST00000563009 CCDC146Q8IYE0 955 aa20.17■□□□□ 0.82
EDC3-206ENST00000563009 PIGBQ92521 554 aa20.17■□□□□ 0.82
EDC3-206ENST00000563009 CAMKK2Q96RR4 588 aa20.17■□□□□ 0.82
EDC3-206ENST00000563009 TMOD3Q9NYL9 352 aa20.17■□□□□ 0.82
EDC3-206ENST00000563009 HTATSF1O43719 755 aaKnown RBP20.16■□□□□ 0.82
EDC3-206ENST00000563009 IL17REQ8NFR9 667 aa20.16■□□□□ 0.82
EDC3-206ENST00000563009 CEMIPQ8WUJ3 1361 aa20.16■□□□□ 0.82
EDC3-206ENST00000563009 CABP4P57796 275 aa20.15■□□□□ 0.82
EDC3-206ENST00000563009 RREB1Q92766 1687 aa20.14■□□□□ 0.81
EDC3-206ENST00000563009 TMPOP42166 694 aaKnown RBP20.14■□□□□ 0.81
EDC3-206ENST00000563009 MIER1Q8N108 512 aa20.14■□□□□ 0.81
EDC3-206ENST00000563009 SLC52A2Q9HAB3 445 aa20.14■□□□□ 0.81
EDC3-206ENST00000563009 LY75O60449 1722 aa20.13■□□□□ 0.81
EDC3-206ENST00000563009 EZH2Q15910 746 aaKnown RBP20.13■□□□□ 0.81
EDC3-206ENST00000563009 NFATC2IPQ8NCF5 419 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms