RNA–Protein interactions for RNA: ENST00000562534.5

USB1-206, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-206ENST00000562534 AEBP1Q8IUX7 1158 aa21.85■■□□□ 1.09
USB1-206ENST00000562534 DDX54Q8TDD1 881 aaKnown RBP21.85■■□□□ 1.09
USB1-206ENST00000562534 PLEKHG2Q9H7P9 1386 aa21.85■■□□□ 1.09
USB1-206ENST00000562534 OVOS2A0A0G2JMS6 1433 aa21.84■■□□□ 1.09
USB1-206ENST00000562534 FCHSD2O94868 740 aa21.84■■□□□ 1.09
USB1-206ENST00000562534 MARCH10Q8NA82 808 aaPredicted RBP21.84■■□□□ 1.09
USB1-206ENST00000562534 PARP4Q9UKK3 1724 aaKnown RBP21.83■■□□□ 1.09
USB1-206ENST00000562534 DIEXFQ68CQ4 756 aaKnown RBP21.83■■□□□ 1.09
USB1-206ENST00000562534 PNNQ9H307 717 aaKnown RBP21.83■■□□□ 1.09
USB1-206ENST00000562534 MEGF6O75095 1541 aa21.82■■□□□ 1.08
USB1-206ENST00000562534 FAM182BQ5T319 152 aa21.81■■□□□ 1.08
USB1-206ENST00000562534 TNS2Q63HR2 1409 aa21.8■■□□□ 1.08
USB1-206ENST00000562534 BRWD3Q6RI45 1802 aa21.8■■□□□ 1.08
USB1-206ENST00000562534 RGPD1P0DJD0 1748 aa21.8■■□□□ 1.08
USB1-206ENST00000562534 PCDH11XQ9BZA7 1347 aa21.8■■□□□ 1.08
USB1-206ENST00000562534 PCDH11YQ9BZA8 1340 aa21.8■■□□□ 1.08
USB1-206ENST00000562534 CCDC125Q86Z20 511 aa21.79■■□□□ 1.08
USB1-206ENST00000562534 WNK3Q9BYP7 1800 aa21.78■■□□□ 1.08
USB1-206ENST00000562534 NEFMP07197 916 aa21.78■■□□□ 1.08
USB1-206ENST00000562534 WDR43Q15061 677 aaKnown RBP eCLIP21.78■■□□□ 1.08
USB1-206ENST00000562534 IFNL2Q8IZJ0 200 aa21.78■■□□□ 1.08
USB1-206ENST00000562534 RSPH6AQ9H0K4 717 aa21.78■■□□□ 1.08
USB1-206ENST00000562534 LRRC37A3O60309 1634 aa21.77■■□□□ 1.07
USB1-206ENST00000562534 BCL9O00512 1426 aa21.76■■□□□ 1.07
USB1-206ENST00000562534 CYP27B1O15528 508 aa21.76■■□□□ 1.07
USB1-206ENST00000562534 PRKAR2BP31323 418 aa21.76■■□□□ 1.07
USB1-206ENST00000562534 NKX1-1Q15270 411 aaPredicted RBP21.75■■□□□ 1.07
USB1-206ENST00000562534 MRS2Q9HD23 443 aa21.75■■□□□ 1.07
USB1-206ENST00000562534 HSP90AB1P08238 724 aaKnown RBP21.74■■□□□ 1.07
USB1-206ENST00000562534 PHKG2P15735 406 aa21.74■■□□□ 1.07
USB1-206ENST00000562534 C1orf141Q5JVX7 400 aa21.74■■□□□ 1.07
USB1-206ENST00000562534 ZNF530Q6P9A1 599 aaPredicted RBP21.74■■□□□ 1.07
USB1-206ENST00000562534 SOCS7O14512 581 aa21.73■■□□□ 1.07
USB1-206ENST00000562534 CCDC184Q52MB2 194 aa21.73■■□□□ 1.07
USB1-206ENST00000562534 UPF1Q92900 1129 aaKnown RBP eCLIP21.73■■□□□ 1.07
USB1-206ENST00000562534 ADAMTS8Q9UP79 889 aa21.73■■□□□ 1.07
USB1-206ENST00000562534 SF3B2Q13435 895 aaKnown RBP21.72■■□□□ 1.07
USB1-206ENST00000562534 MTHFSDQ2M296 383 aaKnown RBP21.72■■□□□ 1.07
USB1-206ENST00000562534 AKAP4Q5JQC9 854 aa21.72■■□□□ 1.07
USB1-206ENST00000562534 GAS2L2Q8NHY3 880 aa21.72■■□□□ 1.07
USB1-206ENST00000562534 PHACTR3Q96KR7 559 aa21.72■■□□□ 1.07
USB1-206ENST00000562534 TRIM37O94972 964 aa21.71■■□□□ 1.07
USB1-206ENST00000562534 BCL11BQ9C0K0 894 aaPredicted RBP21.71■■□□□ 1.07
USB1-206ENST00000562534 PNISRQ8TF01 805 aaKnown RBP21.7■■□□□ 1.06
USB1-206ENST00000562534 DCAF5Q96JK2 942 aa21.7■■□□□ 1.06
USB1-206ENST00000562534 PLEKHF1Q96S99 279 aa21.7■■□□□ 1.06
USB1-206ENST00000562534 CCER2I3L3R5 266 aa21.68■■□□□ 1.06
USB1-206ENST00000562534 ACSBG1Q96GR2 724 aa21.68■■□□□ 1.06
USB1-206ENST00000562534 PKD1L3Q7Z443 1732 aa21.68■■□□□ 1.06
USB1-206ENST00000562534 MAPK8IP3Q9UPT6 1336 aa21.67■■□□□ 1.06
USB1-206ENST00000562534 PRIM1P49642 420 aaKnown RBP21.67■■□□□ 1.06
USB1-206ENST00000562534 GNAT3A8MTJ3 354 aa21.66■■□□□ 1.06
USB1-206ENST00000562534 ERVV-2B6SEH9 535 aa21.66■■□□□ 1.06
USB1-206ENST00000562534 KCNQ2O43526 872 aa21.66■■□□□ 1.06
USB1-206ENST00000562534 RUNDC1Q96C34 613 aa21.66■■□□□ 1.06
USB1-206ENST00000562534 APBA3O96018 575 aa21.65■■□□□ 1.06
USB1-206ENST00000562534 SYTL4Q96C24 671 aaPredicted RBP21.65■■□□□ 1.06
USB1-206ENST00000562534 MPRIPQ6WCQ1 1025 aa21.64■■□□□ 1.05
USB1-206ENST00000562534 HTATSF1O43719 755 aaKnown RBP21.63■■□□□ 1.05
USB1-206ENST00000562534 MIER1Q8N108 512 aa21.63■■□□□ 1.05
USB1-206ENST00000562534 SHANK3Q9BYB0 1731 aa21.63■■□□□ 1.05
USB1-206ENST00000562534 BAG6P46379 1132 aa21.62■■□□□ 1.05
USB1-206ENST00000562534 NFE2L2Q16236 605 aa21.62■■□□□ 1.05
USB1-206ENST00000562534 RTF1Q92541 710 aaKnown RBP21.62■■□□□ 1.05
USB1-206ENST00000562534 PLSCR1O15162 318 aa21.61■■□□□ 1.05
USB1-206ENST00000562534 RNMTO43148 476 aaKnown RBP21.61■■□□□ 1.05
USB1-206ENST00000562534 CABP4P57796 275 aa21.61■■□□□ 1.05
USB1-206ENST00000562534 CCDC146Q8IYE0 955 aa21.61■■□□□ 1.05
USB1-206ENST00000562534 LGR6Q9HBX8 967 aa21.61■■□□□ 1.05
USB1-206ENST00000562534 KAT6BQ8WYB5 2073 aa21.6■■□□□ 1.05
USB1-206ENST00000562534 PTF1AQ7RTS3 328 aa21.6■■□□□ 1.05
USB1-206ENST00000562534 TMOD3Q9NYL9 352 aa21.6■■□□□ 1.05
USB1-206ENST00000562534 MAP3K5Q99683 1374 aa21.6■■□□□ 1.05
USB1-206ENST00000562534 TMPOP42166 694 aaKnown RBP21.59■■□□□ 1.05
USB1-206ENST00000562534 FAM9BQ8IZU0 186 aa21.59■■□□□ 1.05
USB1-206ENST00000562534 RIPK4P57078 832 aa21.58■■□□□ 1.05
USB1-206ENST00000562534 NFATC2IPQ8NCF5 419 aa21.58■■□□□ 1.05
USB1-206ENST00000562534 IL17REQ8NFR9 667 aa21.58■■□□□ 1.05
USB1-206ENST00000562534 PIGBQ92521 554 aa21.58■■□□□ 1.05
USB1-206ENST00000562534 SBF2Q86WG5 1849 aa21.57■■□□□ 1.04
USB1-206ENST00000562534 SLC52A2Q9HAB3 445 aa21.56■■□□□ 1.04
USB1-206ENST00000562534 KDM6AO15550 1401 aaPredicted RBP21.55■■□□□ 1.04
USB1-206ENST00000562534 EN1Q05925 392 aaPredicted RBP21.55■■□□□ 1.04
USB1-206ENST00000562534 LMOD3Q0VAK6 560 aa21.55■■□□□ 1.04
USB1-206ENST00000562534 TEFQ10587 303 aa21.55■■□□□ 1.04
USB1-206ENST00000562534 DEFB132Q7Z7B7 95 aa21.55■■□□□ 1.04
USB1-206ENST00000562534 SMARCC1Q92922 1105 aaPredicted RBP21.55■■□□□ 1.04
USB1-206ENST00000562534 APAF1O14727 1248 aa21.54■■□□□ 1.04
USB1-206ENST00000562534 CAMKK2Q96RR4 588 aa21.54■■□□□ 1.04
USB1-206ENST00000562534 NEUROD2Q15784 382 aa21.53■■□□□ 1.04
USB1-206ENST00000562534 NHSQ6T4R5 1651 aa21.53■■□□□ 1.04
USB1-206ENST00000562534 EP400Q96L91 3159 aa21.52■■□□□ 1.04
USB1-206ENST00000562534 HMGB2P26583 209 aaKnown RBP21.52■■□□□ 1.04
USB1-206ENST00000562534 MCM10Q7L590 875 aa21.52■■□□□ 1.04
USB1-206ENST00000562534 CEMIPQ8WUJ3 1361 aa21.51■■□□□ 1.03
USB1-206ENST00000562534 EZH2Q15910 746 aaKnown RBP21.51■■□□□ 1.03
USB1-206ENST00000562534 RRP7AQ9Y3A4 280 aaKnown RBP21.51■■□□□ 1.03
USB1-206ENST00000562534 DOT1LQ8TEK3 1739 aa21.5■■□□□ 1.03
USB1-206ENST00000562534 DCTN1Q14203 1278 aa21.5■■□□□ 1.03
USB1-206ENST00000562534 NCBP3Q53F19 620 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms