RNA–Protein interactions for RNA: ENST00000562354.2

CLUHP3-206, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 4,117 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-206ENST00000562354 IGHDP01880 384 aa11.08□□□□□ -0.64
CLUHP3-206ENST00000562354 MCTP1Q6DN14 999 aa11.08□□□□□ -0.64
CLUHP3-206ENST00000562354 THUMPD2Q9BTF0 503 aaKnown RBP11.08□□□□□ -0.64
CLUHP3-206ENST00000562354 IL16Q14005 1332 aa11.08□□□□□ -0.64
CLUHP3-206ENST00000562354 PRR36Q9H6K5 1346 aa11.08□□□□□ -0.64
CLUHP3-206ENST00000562354 KCNJ4P48050 445 aa11.08□□□□□ -0.64
CLUHP3-206ENST00000562354 GAS2L2Q8NHY3 880 aa11.08□□□□□ -0.64
CLUHP3-206ENST00000562354 SNX21Q969T3 373 aa11.08□□□□□ -0.64
CLUHP3-206ENST00000562354 LETM1O95202 739 aaPredicted RBP11.07□□□□□ -0.64
CLUHP3-206ENST00000562354 ZNF521Q96K83 1311 aa11.07□□□□□ -0.64
CLUHP3-206ENST00000562354 OS9Q13438 667 aaPredicted RBP11.07□□□□□ -0.64
CLUHP3-206ENST00000562354 DMRT2Q9Y5R5 561 aa11.07□□□□□ -0.64
CLUHP3-206ENST00000562354 MCM5P33992 734 aa11.06□□□□□ -0.64
CLUHP3-206ENST00000562354 XPCQ01831 940 aaPredicted RBP11.06□□□□□ -0.64
CLUHP3-206ENST00000562354 HSP90AB2PQ58FF8 381 aa11.06□□□□□ -0.64
CLUHP3-206ENST00000562354 DRC7Q8IY82 874 aa11.06□□□□□ -0.64
CLUHP3-206ENST00000562354 NOB1Q9ULX3 412 aaKnown RBP11.06□□□□□ -0.64
CLUHP3-206ENST00000562354 TWISTNBQ3B726 338 aaPredicted RBP11.06□□□□□ -0.64
CLUHP3-206ENST00000562354 BMP2KLQ5H9B9 411 aa11.06□□□□□ -0.64
CLUHP3-206ENST00000562354 PDCL3Q9H2J4 239 aa11.06□□□□□ -0.64
CLUHP3-206ENST00000562354 FAM13BQ9NYF5 915 aa11.06□□□□□ -0.64
CLUHP3-206ENST00000562354 ARHGEF28Q8N1W1 1705 aaKnown RBP11.06□□□□□ -0.64
CLUHP3-206ENST00000562354 FOXO3O43524 673 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 XRCC6P12956 609 aaKnown RBP eCLIP11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 EIF4A2Q14240 407 aaKnown RBP11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 TSPYL4Q9UJ04 414 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 KIF13AQ9H1H9 1805 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 APBB1O00213 710 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 KCNH5Q8NCM2 988 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 GPATCH3Q96I76 525 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 DIAPH3Q9NSV4 1193 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 TRIM6-TRIM34B2RNG4 842 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 CDK11BP21127 795 aaKnown RBP11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 IL13P35225 146 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 IFT57Q9NWB7 429 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 ADAMTS13Q76LX8 1427 aa11.05□□□□□ -0.64
CLUHP3-206ENST00000562354 CAVIN1Q6NZI2 390 aaKnown RBP11.04□□□□□ -0.64
CLUHP3-206ENST00000562354 R3HCC1Q9Y3T6 440 aaKnown RBP11.04□□□□□ -0.64
CLUHP3-206ENST00000562354 DCTN1Q14203 1278 aa11.04□□□□□ -0.64
CLUHP3-206ENST00000562354 SSH1Q8WYL5 1049 aa11.04□□□□□ -0.64
CLUHP3-206ENST00000562354 FAM184AQ8NB25 1140 aa11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 PIK3R4Q99570 1358 aa11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 C1orf141Q5JVX7 400 aa11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 PHACTR3Q96KR7 559 aa11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 KLHL40Q2TBA0 621 aa11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 HS1BP3Q53T59 392 aa11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 TNPO1Q92973 898 aaKnown RBP11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 AATKQ6ZMQ8 1374 aa11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 MAP3K19Q56UN5 1328 aa11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 TEFQ10587 303 aa11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 AEBP1Q8IUX7 1158 aa11.03□□□□□ -0.64
CLUHP3-206ENST00000562354 MYO5BQ9ULV0 1848 aa11.02□□□□□ -0.64
CLUHP3-206ENST00000562354 TECPR2O15040 1411 aa11.02□□□□□ -0.64
CLUHP3-206ENST00000562354 MYOM1P52179 1685 aa11.02□□□□□ -0.64
CLUHP3-206ENST00000562354 HOMEZQ8IX15 550 aa11.02□□□□□ -0.64
CLUHP3-206ENST00000562354 TRMT2AQ8IZ69 625 aaKnown RBP11.02□□□□□ -0.64
CLUHP3-206ENST00000562354 TSPY26PQ9H489 355 aa11.02□□□□□ -0.64
CLUHP3-206ENST00000562354 MED14O60244 1454 aa11.02□□□□□ -0.65
CLUHP3-206ENST00000562354 FLT4P35916 1363 aa11.02□□□□□ -0.65
CLUHP3-206ENST00000562354 SMC5Q8IY18 1101 aa11.02□□□□□ -0.65
CLUHP3-206ENST00000562354 CHMP4CQ96CF2 233 aa11.02□□□□□ -0.65
CLUHP3-206ENST00000562354 SLC4A10Q6U841 1118 aa11.02□□□□□ -0.65
CLUHP3-206ENST00000562354 MCM10Q7L590 875 aa11.02□□□□□ -0.65
CLUHP3-206ENST00000562354 TRIM35Q9UPQ4 493 aa11.02□□□□□ -0.65
CLUHP3-206ENST00000562354 TMEM57Q8N5G2 664 aa11.01□□□□□ -0.65
CLUHP3-206ENST00000562354 RUFY2Q8WXA3 655 aa11.01□□□□□ -0.65
CLUHP3-206ENST00000562354 USP6P35125 1406 aa11.01□□□□□ -0.65
CLUHP3-206ENST00000562354 FAM83GA6ND36 823 aa11.01□□□□□ -0.65
CLUHP3-206ENST00000562354 RPAP2Q8IXW5 612 aaPredicted RBP11.01□□□□□ -0.65
CLUHP3-206ENST00000562354 PLEKHF1Q96S99 279 aa11.01□□□□□ -0.65
CLUHP3-206ENST00000562354 KIF3AQ9Y496 699 aa11.01□□□□□ -0.65
CLUHP3-206ENST00000562354 PCDHB15Q9Y5E8 787 aa11.01□□□□□ -0.65
CLUHP3-206ENST00000562354 ERC2O15083 957 aa11□□□□□ -0.65
CLUHP3-206ENST00000562354 FGD1P98174 961 aa11□□□□□ -0.65
CLUHP3-206ENST00000562354 NPHP4O75161 1426 aaPredicted RBP11□□□□□ -0.65
CLUHP3-206ENST00000562354 CPSF1Q10570 1443 aaKnown RBP11□□□□□ -0.65
CLUHP3-206ENST00000562354 A0A0U1RQG5 324 aaPredicted RBP11□□□□□ -0.65
CLUHP3-206ENST00000562354 KRT28Q7Z3Y7 464 aa11□□□□□ -0.65
CLUHP3-206ENST00000562354 TRIM27P14373 513 aa10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 PRPF40AO75400 957 aaKnown RBP10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 PLEKHO1Q53GL0 409 aaPredicted RBP10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 ARHGAP45Q92619 1136 aa10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 C19orf44Q9H6X5 657 aa10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 MBIPQ9NS73 344 aa10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 NLRP2Q9NX02 1062 aa10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 TPM4P67936 248 aa10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 RAPGEF4Q8WZA2 1011 aa10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 SBNO1A3KN83 1393 aa10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 NUCB1Q02818 461 aa10.99□□□□□ -0.65
CLUHP3-206ENST00000562354 HSPA2P54652 639 aa10.98□□□□□ -0.65
CLUHP3-206ENST00000562354 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
CLUHP3-206ENST00000562354 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.98□□□□□ -0.65
CLUHP3-206ENST00000562354 GNAT3A8MTJ3 354 aa10.98□□□□□ -0.65
CLUHP3-206ENST00000562354 TERF1P54274 439 aa10.98□□□□□ -0.65
CLUHP3-206ENST00000562354 USHBP1Q8N6Y0 703 aa10.98□□□□□ -0.65
CLUHP3-206ENST00000562354 WDR33Q9C0J8 1336 aaKnown RBP10.98□□□□□ -0.65
CLUHP3-206ENST00000562354 PTCH1Q13635 1447 aa10.98□□□□□ -0.65
CLUHP3-206ENST00000562354 HSP90AB4PQ58FF6 505 aa10.98□□□□□ -0.65
CLUHP3-206ENST00000562354 CADPS2Q86UW7 1296 aa10.98□□□□□ -0.65
CLUHP3-206ENST00000562354 NECTIN2Q92692 538 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms