RNA–Protein interactions for RNA: ENST00000562045.1

SYNGR3-202, Transcript of synaptogyrin 3, humanhuman

TSL 2 BASIC

Gene SYNGR3, Length 1,743 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-202ENST00000562045 TNS2Q63HR2 1409 aa29.98■■■□□ 2.39
SYNGR3-202ENST00000562045 OVOS2A0A0G2JMS6 1433 aa29.97■■■□□ 2.39
SYNGR3-202ENST00000562045 EXOC5O00471 708 aa29.96■■■□□ 2.39
SYNGR3-202ENST00000562045 PDE3BQ13370 1112 aa29.96■■■□□ 2.39
SYNGR3-202ENST00000562045 SULT6B1Q6IMI4 303 aa29.95■■■□□ 2.38
SYNGR3-202ENST00000562045 MARCH10Q8NA82 808 aaPredicted RBP29.95■■■□□ 2.38
SYNGR3-202ENST00000562045 RAPGEF4Q8WZA2 1011 aa29.95■■■□□ 2.38
SYNGR3-202ENST00000562045 CFAP53Q96M91 514 aa29.95■■■□□ 2.38
SYNGR3-202ENST00000562045 PKD1L3Q7Z443 1732 aa29.93■■■□□ 2.38
SYNGR3-202ENST00000562045 HMOX1P09601 288 aa29.93■■■□□ 2.38
SYNGR3-202ENST00000562045 TATP17735 454 aaPredicted RBP29.93■■■□□ 2.38
SYNGR3-202ENST00000562045 KDRP35968 1356 aa29.92■■■□□ 2.38
SYNGR3-202ENST00000562045 U2SURPO15042 1029 aaKnown RBP29.91■■■□□ 2.38
SYNGR3-202ENST00000562045 ZCRB1Q8TBF4 217 aaKnown RBP29.89■■■□□ 2.38
SYNGR3-202ENST00000562045 DDX54Q8TDD1 881 aaKnown RBP29.88■■■□□ 2.37
SYNGR3-202ENST00000562045 SBF2Q86WG5 1849 aa29.87■■■□□ 2.37
SYNGR3-202ENST00000562045 WDR43Q15061 677 aaKnown RBP eCLIP29.86■■■□□ 2.37
SYNGR3-202ENST00000562045 UPF1Q92900 1129 aaKnown RBP eCLIP29.84■■■□□ 2.37
SYNGR3-202ENST00000562045 SOCS7O14512 581 aa29.83■■■□□ 2.37
SYNGR3-202ENST00000562045 CYP27B1O15528 508 aa29.82■■■□□ 2.36
SYNGR3-202ENST00000562045 U2AF1L5P0DN76 240 aaPredicted RBP29.82■■■□□ 2.36
SYNGR3-202ENST00000562045 U2AF1Q01081 240 aaKnown RBP eCLIP29.82■■■□□ 2.36
SYNGR3-202ENST00000562045 FAM196AQ6ZSG2 479 aa29.82■■■□□ 2.36
SYNGR3-202ENST00000562045 NUDCQ9Y266 331 aa29.81■■■□□ 2.36
SYNGR3-202ENST00000562045 PTF1AQ7RTS3 328 aa29.8■■■□□ 2.36
SYNGR3-202ENST00000562045 HNRNPUQ00839 825 aaKnown RBP eCLIP29.79■■■□□ 2.36
SYNGR3-202ENST00000562045 RSPH6AQ9H0K4 717 aa29.79■■■□□ 2.36
SYNGR3-202ENST00000562045 PCDH11XQ9BZA7 1347 aa29.79■■■□□ 2.36
SYNGR3-202ENST00000562045 PCDH11YQ9BZA8 1340 aa29.79■■■□□ 2.36
SYNGR3-202ENST00000562045 TNS1Q9HBL0 1735 aaKnown RBP29.79■■■□□ 2.36
SYNGR3-202ENST00000562045 SPG7Q9UQ90 795 aa29.78■■■□□ 2.36
SYNGR3-202ENST00000562045 DOT1LQ8TEK3 1739 aa29.77■■■□□ 2.36
SYNGR3-202ENST00000562045 TRIM37O94972 964 aa29.77■■■□□ 2.36
SYNGR3-202ENST00000562045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.77■■■□□ 2.36
SYNGR3-202ENST00000562045 ADAMTS8Q9UP79 889 aa29.77■■■□□ 2.36
SYNGR3-202ENST00000562045 BCL9O00512 1426 aa29.77■■■□□ 2.36
SYNGR3-202ENST00000562045 KAT6BQ8WYB5 2073 aa29.77■■■□□ 2.36
SYNGR3-202ENST00000562045 TOGARAM1Q9Y4F4 1720 aa29.76■■■□□ 2.35
SYNGR3-202ENST00000562045 ACSBG1Q96GR2 724 aa29.76■■■□□ 2.35
SYNGR3-202ENST00000562045 PRKAR2BP31323 418 aa29.75■■■□□ 2.35
SYNGR3-202ENST00000562045 KCNQ2O43526 872 aa29.74■■■□□ 2.35
SYNGR3-202ENST00000562045 PLEKHO1Q53GL0 409 aaPredicted RBP29.74■■■□□ 2.35
SYNGR3-202ENST00000562045 PHACTR3Q96KR7 559 aa29.74■■■□□ 2.35
SYNGR3-202ENST00000562045 PLEKHG2Q9H7P9 1386 aa29.74■■■□□ 2.35
SYNGR3-202ENST00000562045 CENPBP07199 599 aaPredicted RBP29.74■■■□□ 2.35
SYNGR3-202ENST00000562045 NHSQ6T4R5 1651 aa29.73■■■□□ 2.35
SYNGR3-202ENST00000562045 PHKG2P15735 406 aa29.73■■■□□ 2.35
SYNGR3-202ENST00000562045 MTHFSDQ2M296 383 aaKnown RBP29.72■■■□□ 2.35
SYNGR3-202ENST00000562045 AMOTQ4VCS5 1084 aa29.71■■■□□ 2.35
SYNGR3-202ENST00000562045 ZNF530Q6P9A1 599 aaPredicted RBP29.71■■■□□ 2.35
SYNGR3-202ENST00000562045 FCHSD2O94868 740 aa29.71■■■□□ 2.35
SYNGR3-202ENST00000562045 IFNL2Q8IZJ0 200 aa29.69■■■□□ 2.34
SYNGR3-202ENST00000562045 ITGB4P16144 1822 aa29.68■■■□□ 2.34
SYNGR3-202ENST00000562045 VIRMAQ69YN4 1812 aaKnown RBP29.68■■■□□ 2.34
SYNGR3-202ENST00000562045 NKX1-1Q15270 411 aaPredicted RBP29.68■■■□□ 2.34
SYNGR3-202ENST00000562045 PLEKHF1Q96S99 279 aa29.67■■■□□ 2.34
SYNGR3-202ENST00000562045 BTAF1O14981 1849 aa29.66■■■□□ 2.34
SYNGR3-202ENST00000562045 KDM6AO15550 1401 aaPredicted RBP29.65■■■□□ 2.34
SYNGR3-202ENST00000562045 PRIM1P49642 420 aaKnown RBP29.65■■■□□ 2.34
SYNGR3-202ENST00000562045 DEFB132Q7Z7B7 95 aa29.65■■■□□ 2.34
SYNGR3-202ENST00000562045 BCL11BQ9C0K0 894 aaPredicted RBP29.64■■■□□ 2.34
SYNGR3-202ENST00000562045 ZBED9Q6R2W3 1325 aa29.64■■■□□ 2.33
SYNGR3-202ENST00000562045 CCDC125Q86Z20 511 aa29.63■■■□□ 2.33
SYNGR3-202ENST00000562045 SCN11AQ9UI33 1791 aa29.63■■■□□ 2.33
SYNGR3-202ENST00000562045 SYTL4Q96C24 671 aaPredicted RBP29.62■■■□□ 2.33
SYNGR3-202ENST00000562045 C1orf141Q5JVX7 400 aa29.62■■■□□ 2.33
SYNGR3-202ENST00000562045 MPRIPQ6WCQ1 1025 aa29.62■■■□□ 2.33
SYNGR3-202ENST00000562045 APBA3O96018 575 aa29.61■■■□□ 2.33
SYNGR3-202ENST00000562045 DLG5Q8TDM6 1919 aa29.61■■■□□ 2.33
SYNGR3-202ENST00000562045 AKAP4Q5JQC9 854 aa29.6■■■□□ 2.33
SYNGR3-202ENST00000562045 CCDC146Q8IYE0 955 aa29.6■■■□□ 2.33
SYNGR3-202ENST00000562045 ADAMTS7Q9UKP4 1686 aa29.59■■■□□ 2.33
SYNGR3-202ENST00000562045 SF3B2Q13435 895 aaKnown RBP29.59■■■□□ 2.33
SYNGR3-202ENST00000562045 LGR6Q9HBX8 967 aa29.59■■■□□ 2.33
SYNGR3-202ENST00000562045 EN1Q05925 392 aaPredicted RBP29.58■■■□□ 2.33
SYNGR3-202ENST00000562045 DCAF5Q96JK2 942 aa29.58■■■□□ 2.33
SYNGR3-202ENST00000562045 GAS2L2Q8NHY3 880 aa29.57■■■□□ 2.32
SYNGR3-202ENST00000562045 RUNDC1Q96C34 613 aa29.56■■■□□ 2.32
SYNGR3-202ENST00000562045 PNNQ9H307 717 aaKnown RBP29.56■■■□□ 2.32
SYNGR3-202ENST00000562045 MAP3K5Q99683 1374 aa29.55■■■□□ 2.32
SYNGR3-202ENST00000562045 HSP90AB1P08238 724 aaKnown RBP29.54■■■□□ 2.32
SYNGR3-202ENST00000562045 PIGBQ92521 554 aa29.54■■■□□ 2.32
SYNGR3-202ENST00000562045 EZH2Q15910 746 aaKnown RBP29.54■■■□□ 2.32
SYNGR3-202ENST00000562045 BAG6P46379 1132 aa29.53■■■□□ 2.32
SYNGR3-202ENST00000562045 CAMKK2Q96RR4 588 aa29.53■■■□□ 2.32
SYNGR3-202ENST00000562045 GNAT3A8MTJ3 354 aa29.52■■■□□ 2.32
SYNGR3-202ENST00000562045 RNMTO43148 476 aaKnown RBP29.52■■■□□ 2.32
SYNGR3-202ENST00000562045 IL17REQ8NFR9 667 aa29.52■■■□□ 2.32
SYNGR3-202ENST00000562045 RGPD3A6NKT7 1758 aaPredicted RBP29.51■■■□□ 2.31
SYNGR3-202ENST00000562045 RGPD4Q7Z3J3 1758 aa29.51■■■□□ 2.31
SYNGR3-202ENST00000562045 MAPK8IP3Q9UPT6 1336 aa29.5■■■□□ 2.31
SYNGR3-202ENST00000562045 SENP3-EIF4A1A0A087X0R7 540 aa29.5■■■□□ 2.31
SYNGR3-202ENST00000562045 ERVV-2B6SEH9 535 aa29.5■■■□□ 2.31
SYNGR3-202ENST00000562045 NGEFQ8N5V2 710 aa29.5■■■□□ 2.31
SYNGR3-202ENST00000562045 RREB1Q92766 1687 aa29.49■■■□□ 2.31
SYNGR3-202ENST00000562045 APAF1O14727 1248 aa29.49■■■□□ 2.31
SYNGR3-202ENST00000562045 PLSCR1O15162 318 aa29.48■■■□□ 2.31
SYNGR3-202ENST00000562045 DCTN1Q14203 1278 aa29.48■■■□□ 2.31
SYNGR3-202ENST00000562045 NFE2L2Q16236 605 aa29.48■■■□□ 2.31
SYNGR3-202ENST00000562045 PROM2Q8N271 834 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms