RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 ZNF827Q17R98 1081 aa20.4■□□□□ 0.86
SPG7-205ENST00000561945 LTV1Q96GA3 475 aaPredicted RBP20.4■□□□□ 0.86
SPG7-205ENST00000561945 ATF5Q9Y2D1 282 aaPredicted RBP20.4■□□□□ 0.86
SPG7-205ENST00000561945 KAT6BQ8WYB5 2073 aa20.39■□□□□ 0.86
SPG7-205ENST00000561945 ANKRD26Q9UPS8 1709 aa20.39■□□□□ 0.86
SPG7-205ENST00000561945 DCAF8L1A6NGE4 600 aa20.39■□□□□ 0.85
SPG7-205ENST00000561945 DDX54Q8TDD1 881 aaKnown RBP20.39■□□□□ 0.85
SPG7-205ENST00000561945 INSRP06213 1382 aa20.38■□□□□ 0.85
SPG7-205ENST00000561945 CDCA8Q53HL2 280 aa20.38■□□□□ 0.85
SPG7-205ENST00000561945 ZCRB1Q8TBF4 217 aaKnown RBP20.38■□□□□ 0.85
SPG7-205ENST00000561945 SYT17Q9BSW7 474 aa20.38■□□□□ 0.85
SPG7-205ENST00000561945 TIMELESSQ9UNS1 1208 aa20.38■□□□□ 0.85
SPG7-205ENST00000561945 GOLGB1Q14789 3259 aaKnown RBP20.37■□□□□ 0.85
SPG7-205ENST00000561945 NBPF6Q5VWK0 638 aa20.37■□□□□ 0.85
SPG7-205ENST00000561945 NBPF4Q96M43 638 aa20.37■□□□□ 0.85
SPG7-205ENST00000561945 FHDC1Q9C0D6 1143 aaPredicted RBP20.37■□□□□ 0.85
SPG7-205ENST00000561945 RRS1Q15050 365 aaKnown RBP20.36■□□□□ 0.85
SPG7-205ENST00000561945 SLC16A10Q8TF71 515 aa20.36■□□□□ 0.85
SPG7-205ENST00000561945 GGNBP2Q9H3C7 697 aa20.36■□□□□ 0.85
SPG7-205ENST00000561945 SMG6Q86US8 1419 aaKnown RBP20.36■□□□□ 0.85
SPG7-205ENST00000561945 PRIM1P49642 420 aaKnown RBP20.35■□□□□ 0.85
SPG7-205ENST00000561945 NCAPD2Q15021 1401 aa20.35■□□□□ 0.85
SPG7-205ENST00000561945 FLT4P35916 1363 aa20.34■□□□□ 0.85
SPG7-205ENST00000561945 PKD1L3Q7Z443 1732 aa20.34■□□□□ 0.85
SPG7-205ENST00000561945 PNPLA7Q6ZV29 1317 aa20.33■□□□□ 0.85
SPG7-205ENST00000561945 ARXQ96QS3 562 aa20.33■□□□□ 0.85
SPG7-205ENST00000561945 CARD14Q9BXL6 1004 aa20.33■□□□□ 0.85
SPG7-205ENST00000561945 CHD4Q14839 1912 aa20.31■□□□□ 0.84
SPG7-205ENST00000561945 CLSPNQ9HAW4 1339 aa20.31■□□□□ 0.84
SPG7-205ENST00000561945 HSP90AB2PQ58FF8 381 aa20.31■□□□□ 0.84
SPG7-205ENST00000561945 C5P01031 1676 aa20.3■□□□□ 0.84
SPG7-205ENST00000561945 RAPGEF4Q8WZA2 1011 aa20.29■□□□□ 0.84
SPG7-205ENST00000561945 TOGARAM1Q9Y4F4 1720 aa20.29■□□□□ 0.84
SPG7-205ENST00000561945 TAF1LQ8IZX4 1826 aa20.29■□□□□ 0.84
SPG7-205ENST00000561945 NSD3Q9BZ95 1437 aa20.28■□□□□ 0.84
SPG7-205ENST00000561945 ITGB4P16144 1822 aa20.28■□□□□ 0.84
SPG7-205ENST00000561945 USHBP1Q8N6Y0 703 aa20.28■□□□□ 0.84
SPG7-205ENST00000561945 SYTL4Q96C24 671 aaPredicted RBP20.28■□□□□ 0.84
SPG7-205ENST00000561945 PCDH11XQ9BZA7 1347 aa20.27■□□□□ 0.84
SPG7-205ENST00000561945 PCDH11YQ9BZA8 1340 aa20.27■□□□□ 0.84
SPG7-205ENST00000561945 TATP17735 454 aaPredicted RBP20.27■□□□□ 0.84
SPG7-205ENST00000561945 MAP2P11137 1827 aaKnown RBP20.26■□□□□ 0.83
SPG7-205ENST00000561945 TFCP2L1Q9NZI6 479 aa20.25■□□□□ 0.83
SPG7-205ENST00000561945 CCNL1Q9UK58 526 aaPredicted RBP20.25■□□□□ 0.83
SPG7-205ENST00000561945 KCNQ4P56696 695 aa20.24■□□□□ 0.83
SPG7-205ENST00000561945 WASHC2AQ641Q2 1341 aa20.24■□□□□ 0.83
SPG7-205ENST00000561945 CYP27B1O15528 508 aa20.23■□□□□ 0.83
SPG7-205ENST00000561945 HMGB2P26583 209 aaKnown RBP20.23■□□□□ 0.83
SPG7-205ENST00000561945 EMILIN1Q9Y6C2 1016 aa20.23■□□□□ 0.83
SPG7-205ENST00000561945 PLEKHG2Q9H7P9 1386 aa20.22■□□□□ 0.83
SPG7-205ENST00000561945 POLD1P28340 1107 aa20.22■□□□□ 0.83
SPG7-205ENST00000561945 NKX1-1Q15270 411 aaPredicted RBP20.22■□□□□ 0.83
SPG7-205ENST00000561945 ZNF784Q8NCA9 323 aaPredicted RBP20.2■□□□□ 0.82
SPG7-205ENST00000561945 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
SPG7-205ENST00000561945 C4BP0C0L5 1744 aa20.19■□□□□ 0.82
SPG7-205ENST00000561945 COL23A1Q86Y22 540 aaPredicted RBP20.19■□□□□ 0.82
SPG7-205ENST00000561945 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.19■□□□□ 0.82
SPG7-205ENST00000561945 UBR3Q6ZT12 1888 aa20.18■□□□□ 0.82
SPG7-205ENST00000561945 POLKQ9UBT6 870 aa20.17■□□□□ 0.82
SPG7-205ENST00000561945 EYA1Q99502 592 aa20.16■□□□□ 0.82
SPG7-205ENST00000561945 MPRIPQ6WCQ1 1025 aa20.15■□□□□ 0.82
SPG7-205ENST00000561945 FLAD1Q8NFF5 587 aa20.15■□□□□ 0.82
SPG7-205ENST00000561945 SMARCC1Q92922 1105 aaPredicted RBP20.15■□□□□ 0.82
SPG7-205ENST00000561945 ZNF831Q5JPB2 1677 aa20.14■□□□□ 0.81
SPG7-205ENST00000561945 SPG7Q9UQ90 795 aa20.14■□□□□ 0.81
SPG7-205ENST00000561945 NLGN2Q8NFZ4 835 aa20.13■□□□□ 0.81
SPG7-205ENST00000561945 PIGBQ92521 554 aa20.13■□□□□ 0.81
SPG7-205ENST00000561945 GPR162Q16538 588 aa20.12■□□□□ 0.81
SPG7-205ENST00000561945 PPM1GO15355 546 aaPredicted RBP20.1■□□□□ 0.81
SPG7-205ENST00000561945 PHKG2P15735 406 aa20.09■□□□□ 0.81
SPG7-205ENST00000561945 EIF4A2Q14240 407 aaKnown RBP20.09■□□□□ 0.81
SPG7-205ENST00000561945 IFNL2Q8IZJ0 200 aa20.09■□□□□ 0.81
SPG7-205ENST00000561945 CD2APQ9Y5K6 639 aa20.09■□□□□ 0.81
SPG7-205ENST00000561945 IGSF1Q8N6C5 1336 aa20.08■□□□□ 0.81
SPG7-205ENST00000561945 EIF4G2P78344 907 aaKnown RBP eCLIP20.08■□□□□ 0.81
SPG7-205ENST00000561945 AMIGO3Q86WK7 504 aa20.08■□□□□ 0.81
SPG7-205ENST00000561945 MSH5O43196 834 aa20.07■□□□□ 0.8
SPG7-205ENST00000561945 LOC102724428A0A0B4J2F2 783 aa20.06■□□□□ 0.8
SPG7-205ENST00000561945 SSFA2P28290 1259 aa20.06■□□□□ 0.8
SPG7-205ENST00000561945 SIK1P57059 783 aa20.06■□□□□ 0.8
SPG7-205ENST00000561945 KLHL34Q8N239 644 aa20.06■□□□□ 0.8
SPG7-205ENST00000561945 GRIN3BO60391 1043 aa20.05■□□□□ 0.8
SPG7-205ENST00000561945 YBX3P16989 372 aaKnown RBP eCLIP20.05■□□□□ 0.8
SPG7-205ENST00000561945 AK7Q96M32 723 aa20.05■□□□□ 0.8
SPG7-205ENST00000561945 TMOD3Q9NYL9 352 aa20.05■□□□□ 0.8
SPG7-205ENST00000561945 KDRP35968 1356 aa20.05■□□□□ 0.8
SPG7-205ENST00000561945 COL5A3P25940 1745 aaPredicted RBP20.05■□□□□ 0.8
SPG7-205ENST00000561945 HSPA5P11021 654 aaKnown RBP20.04■□□□□ 0.8
SPG7-205ENST00000561945 MSL1Q68DK7 614 aa20.04■□□□□ 0.8
SPG7-205ENST00000561945 LINC00116Q8NCU8 138 aa20.04■□□□□ 0.8
SPG7-205ENST00000561945 PCGF6Q9BYE7 350 aa20.04■□□□□ 0.8
SPG7-205ENST00000561945 CEP350Q5VT06 3117 aa20.04■□□□□ 0.8
SPG7-205ENST00000561945 PANK3Q9H999 370 aa20.03■□□□□ 0.8
SPG7-205ENST00000561945 ASAP1Q9ULH1 1129 aa20.03■□□□□ 0.8
SPG7-205ENST00000561945 KIF13BQ9NQT8 1826 aa20.02■□□□□ 0.8
SPG7-205ENST00000561945 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.02■□□□□ 0.8
SPG7-205ENST00000561945 ITPK1Q13572 414 aa20.02■□□□□ 0.8
SPG7-205ENST00000561945 ATG3Q9NT62 314 aa20.02■□□□□ 0.8
SPG7-205ENST00000561945 CICQ96RK0 1608 aaPredicted RBP20.02■□□□□ 0.79
SPG7-205ENST00000561945 ERVV-2B6SEH9 535 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 349.4 ms