RNA–Protein interactions for RNA: ENST00000561304.5

ZEB1-223, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,383 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-223ENST00000561304 SOX12O15370 315 aa10.5□□□□□ -0.73
ZEB1-223ENST00000561304 SLC12A5Q9H2X9 1139 aa10.5□□□□□ -0.73
ZEB1-223ENST00000561304 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
ZEB1-223ENST00000561304 ST20-MTHFSA0A0A6YYL1 179 aa10.49□□□□□ -0.73
ZEB1-223ENST00000561304 ATN1P54259 1190 aaPredicted RBP10.49□□□□□ -0.73
ZEB1-223ENST00000561304 EVA1CP58658 441 aa10.49□□□□□ -0.73
ZEB1-223ENST00000561304 LCE2DQ5TA82 110 aaPredicted RBP10.49□□□□□ -0.73
ZEB1-223ENST00000561304 NME9Q86XW9 330 aa10.49□□□□□ -0.73
ZEB1-223ENST00000561304 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.49□□□□□ -0.733e-6■■■■□ 22.7
ZEB1-223ENST00000561304 OVOS2A0A0J9YW53 1432 aa10.49□□□□□ -0.73
ZEB1-223ENST00000561304 OVOS2Q6IE36 1432 aa10.49□□□□□ -0.73
ZEB1-223ENST00000561304 EDC4Q6P2E9 1401 aaKnown RBP10.49□□□□□ -0.73
ZEB1-223ENST00000561304 FAM208AQ9UK61 1670 aaKnown RBP10.48□□□□□ -0.73
ZEB1-223ENST00000561304 USP31Q70CQ4 1352 aa10.48□□□□□ -0.73
ZEB1-223ENST00000561304 USP47Q96K76 1375 aa10.48□□□□□ -0.73
ZEB1-223ENST00000561304 DISP2A7MBM2 1401 aa10.48□□□□□ -0.73
ZEB1-223ENST00000561304 BARGINQ6ZT62 677 aa10.48□□□□□ -0.73
ZEB1-223ENST00000561304 ARHGEF25Q86VW2 580 aa10.48□□□□□ -0.73
ZEB1-223ENST00000561304 TCP11L2Q8N4U5 519 aa10.48□□□□□ -0.73
ZEB1-223ENST00000561304 TMC1Q8TDI8 760 aa10.48□□□□□ -0.73
ZEB1-223ENST00000561304 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
ZEB1-223ENST00000561304 RGPD3A6NKT7 1758 aaPredicted RBP10.48□□□□□ -0.73
ZEB1-223ENST00000561304 RGPD4Q7Z3J3 1758 aa10.48□□□□□ -0.73
ZEB1-223ENST00000561304 ECM2O94769 699 aaPredicted RBP10.47□□□□□ -0.73
ZEB1-223ENST00000561304 PDAP1Q13442 181 aaKnown RBP10.47□□□□□ -0.73
ZEB1-223ENST00000561304 SHANK3Q9BYB0 1731 aa10.47□□□□□ -0.73
ZEB1-223ENST00000561304 LRP5O75197 1615 aa10.46□□□□□ -0.73
ZEB1-223ENST00000561304 RIOK3O14730 519 aaKnown RBP10.46□□□□□ -0.74
ZEB1-223ENST00000561304 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.74
ZEB1-223ENST00000561304 SLC39A7Q92504 469 aa10.46□□□□□ -0.74
ZEB1-223ENST00000561304 C7P10643 843 aa10.45□□□□□ -0.74
ZEB1-223ENST00000561304 SF3B2Q13435 895 aaKnown RBP10.45□□□□□ -0.74
ZEB1-223ENST00000561304 PCGF6Q9BYE7 350 aa10.45□□□□□ -0.74
ZEB1-223ENST00000561304 WDR17Q8IZU2 1322 aa10.45□□□□□ -0.74
ZEB1-223ENST00000561304 TRIM37O94972 964 aa10.44□□□□□ -0.74
ZEB1-223ENST00000561304 PSEN1P49768 467 aa10.44□□□□□ -0.74
ZEB1-223ENST00000561304 EN1Q05925 392 aaPredicted RBP10.44□□□□□ -0.74
ZEB1-223ENST00000561304 HDGFL2Q7Z4V5 671 aaPredicted RBP10.44□□□□□ -0.74
ZEB1-223ENST00000561304 KCNH5Q8NCM2 988 aa10.44□□□□□ -0.74
ZEB1-223ENST00000561304 THRAP3Q9Y2W1 955 aaKnown RBP10.44□□□□□ -0.74
ZEB1-223ENST00000561304 NHSQ6T4R5 1651 aa10.44□□□□□ -0.74
ZEB1-223ENST00000561304 NINLQ9Y2I6 1382 aa10.44□□□□□ -0.74
ZEB1-223ENST00000561304 BAG6P46379 1132 aa10.43□□□□□ -0.74
ZEB1-223ENST00000561304 TOM1L2Q6ZVM7 507 aa10.43□□□□□ -0.74
ZEB1-223ENST00000561304 RNF25Q96BH1 459 aaPredicted RBP10.43□□□□□ -0.74
ZEB1-223ENST00000561304 PUS7Q96PZ0 661 aaKnown RBP10.43□□□□□ -0.74
ZEB1-223ENST00000561304 TRIM35Q9UPQ4 493 aa10.43□□□□□ -0.74
ZEB1-223ENST00000561304 ANKRD26Q9UPS8 1709 aa10.43□□□□□ -0.74
ZEB1-223ENST00000561304 ANKRD36BQ8N2N9 1353 aa10.43□□□□□ -0.74
ZEB1-223ENST00000561304 EZH2Q15910 746 aaKnown RBP10.42□□□□□ -0.74
ZEB1-223ENST00000561304 IER5LQ5T953 404 aa10.42□□□□□ -0.74
ZEB1-223ENST00000561304 FAM196AQ6ZSG2 479 aa10.42□□□□□ -0.74
ZEB1-223ENST00000561304 TERF2IPQ9NYB0 399 aa10.42□□□□□ -0.74
ZEB1-223ENST00000561304 TAOK2Q9UL54 1235 aa10.42□□□□□ -0.74
ZEB1-223ENST00000561304 OVOS2A0A0G2JMS6 1433 aa10.42□□□□□ -0.74
ZEB1-223ENST00000561304 BTAF1O14981 1849 aa10.42□□□□□ -0.74
ZEB1-223ENST00000561304 KAT6BQ8WYB5 2073 aa10.42□□□□□ -0.74
ZEB1-223ENST00000561304 PDE3BQ13370 1112 aa10.41□□□□□ -0.74
ZEB1-223ENST00000561304 ERBB3P21860 1342 aa10.41□□□□□ -0.74
ZEB1-223ENST00000561304 TNS2Q63HR2 1409 aa10.41□□□□□ -0.74
ZEB1-223ENST00000561304 MAP2P11137 1827 aaKnown RBP10.41□□□□□ -0.74
ZEB1-223ENST00000561304 PSDA5PKW4 1024 aaPredicted RBP10.4□□□□□ -0.74
ZEB1-223ENST00000561304 FBLN1P23142 703 aa10.4□□□□□ -0.74
ZEB1-223ENST00000561304 DOT1LQ8TEK3 1739 aa10.4□□□□□ -0.74
ZEB1-223ENST00000561304 CAMKK2Q96RR4 588 aa10.4□□□□□ -0.74
ZEB1-223ENST00000561304 CLSPNQ9HAW4 1339 aa10.4□□□□□ -0.74
ZEB1-223ENST00000561304 METRNQ9UJH8 293 aa10.4□□□□□ -0.74
ZEB1-223ENST00000561304 CSB-PGBD3P0DP91 1061 aa10.39□□□□□ -0.75
ZEB1-223ENST00000561304 PTF1AQ7RTS3 328 aa10.39□□□□□ -0.75
ZEB1-223ENST00000561304 MARCH10Q8NA82 808 aaPredicted RBP10.39□□□□□ -0.75
ZEB1-223ENST00000561304 CARD10Q9BWT7 1032 aa10.39□□□□□ -0.75
ZEB1-223ENST00000561304 CASZ1Q86V15 1759 aa10.39□□□□□ -0.75
ZEB1-223ENST00000561304 CCDC7Q96M83 1385 aa10.39□□□□□ -0.75
ZEB1-223ENST00000561304 APBA3O96018 575 aa10.39□□□□□ -0.75
ZEB1-223ENST00000561304 TMF1P82094 1093 aa10.39□□□□□ -0.75
ZEB1-223ENST00000561304 DDB1Q16531 1140 aa10.39□□□□□ -0.75
ZEB1-223ENST00000561304 POTEJP0CG39 1038 aa10.38□□□□□ -0.75
ZEB1-223ENST00000561304 ANKRD24Q8TF21 1146 aa10.38□□□□□ -0.75
ZEB1-223ENST00000561304 BCL9O00512 1426 aa10.37□□□□□ -0.75
ZEB1-223ENST00000561304 PARD3Q8TEW0 1356 aa10.37□□□□□ -0.75
ZEB1-223ENST00000561304 MAP3K19Q56UN5 1328 aa10.37□□□□□ -0.75
ZEB1-223ENST00000561304 TIMELESSQ9UNS1 1208 aa10.37□□□□□ -0.75
ZEB1-223ENST00000561304 TUBGCP6Q96RT7 1819 aa10.37□□□□□ -0.75
ZEB1-223ENST00000561304 NSD3Q9BZ95 1437 aa10.36□□□□□ -0.75
ZEB1-223ENST00000561304 PAPPAQ13219 1627 aa10.36□□□□□ -0.75
ZEB1-223ENST00000561304 FYB1O15117 783 aa10.36□□□□□ -0.75
ZEB1-223ENST00000561304 R3HDM1Q15032 1099 aaKnown RBP10.36□□□□□ -0.75
ZEB1-223ENST00000561304 COG3Q96JB2 828 aa10.36□□□□□ -0.75
ZEB1-223ENST00000561304 GGNBP2Q9H3C7 697 aa10.36□□□□□ -0.75
ZEB1-223ENST00000561304 NLRP2Q9NX02 1062 aa10.36□□□□□ -0.75
ZEB1-223ENST00000561304 MEGF6O75095 1541 aa10.35□□□□□ -0.75
ZEB1-223ENST00000561304 RGL2O15211 777 aa10.35□□□□□ -0.75
ZEB1-223ENST00000561304 SLC24A1O60721 1099 aa10.35□□□□□ -0.75
ZEB1-223ENST00000561304 GOLGA2Q08379 1002 aa10.35□□□□□ -0.75
ZEB1-223ENST00000561304 RRS1Q15050 365 aaKnown RBP10.35□□□□□ -0.75
ZEB1-223ENST00000561304 IP6K1Q92551 441 aa10.35□□□□□ -0.75
ZEB1-223ENST00000561304 CDCA7Q9BWT1 371 aaPredicted RBP10.35□□□□□ -0.75
ZEB1-223ENST00000561304 CARD14Q9BXL6 1004 aa10.35□□□□□ -0.75
ZEB1-223ENST00000561304 LY75O60449 1722 aa10.34□□□□□ -0.75
ZEB1-223ENST00000561304 PKD1L3Q7Z443 1732 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms