RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 USHBP1Q8N6Y0 703 aa23.79■■□□□ 1.4
CDC42BPB-208ENST00000561271 EMILIN1Q9Y6C2 1016 aa23.79■■□□□ 1.4
CDC42BPB-208ENST00000561271 HSP90AB2PQ58FF8 381 aa23.78■■□□□ 1.4
CDC42BPB-208ENST00000561271 NBPF14Q5TI25 921 aa23.77■■□□□ 1.4
CDC42BPB-208ENST00000561271 NBPF6Q5VWK0 638 aa23.77■■□□□ 1.4
CDC42BPB-208ENST00000561271 NBPF4Q96M43 638 aa23.77■■□□□ 1.4
CDC42BPB-208ENST00000561271 DDX54Q8TDD1 881 aaKnown RBP23.75■■□□□ 1.39
CDC42BPB-208ENST00000561271 ANO8Q9HCE9 1232 aaPredicted RBP23.75■■□□□ 1.39
CDC42BPB-208ENST00000561271 QSER1Q2KHR3 1735 aa23.75■■□□□ 1.39
CDC42BPB-208ENST00000561271 PPM1GO15355 546 aaPredicted RBP23.73■■□□□ 1.39
CDC42BPB-208ENST00000561271 PROM2Q8N271 834 aa23.73■■□□□ 1.39
CDC42BPB-208ENST00000561271 TXNRD1Q16881 649 aa23.72■■□□□ 1.39
CDC42BPB-208ENST00000561271 PANK3Q9H999 370 aa23.72■■□□□ 1.39
CDC42BPB-208ENST00000561271 NCAPD2Q15021 1401 aa23.71■■□□□ 1.39
CDC42BPB-208ENST00000561271 TAF1LQ8IZX4 1826 aa23.7■■□□□ 1.39
CDC42BPB-208ENST00000561271 ZCRB1Q8TBF4 217 aaKnown RBP23.7■■□□□ 1.38
CDC42BPB-208ENST00000561271 TNNT2P45379 298 aaPredicted RBP23.69■■□□□ 1.38
CDC42BPB-208ENST00000561271 RAPGEF4Q8WZA2 1011 aa23.69■■□□□ 1.38
CDC42BPB-208ENST00000561271 NSD2O96028 1365 aa23.68■■□□□ 1.38
CDC42BPB-208ENST00000561271 VIRMAQ69YN4 1812 aaKnown RBP23.68■■□□□ 1.38
CDC42BPB-208ENST00000561271 C5P01031 1676 aa23.67■■□□□ 1.38
CDC42BPB-208ENST00000561271 KIF7Q2M1P5 1343 aa23.66■■□□□ 1.38
CDC42BPB-208ENST00000561271 WASHC2AQ641Q2 1341 aa23.66■■□□□ 1.38
CDC42BPB-208ENST00000561271 TATP17735 454 aaPredicted RBP23.66■■□□□ 1.38
CDC42BPB-208ENST00000561271 POLKQ9UBT6 870 aa23.66■■□□□ 1.38
CDC42BPB-208ENST00000561271 SYTL4Q96C24 671 aaPredicted RBP23.65■■□□□ 1.38
CDC42BPB-208ENST00000561271 PCDH11XQ9BZA7 1347 aa23.63■■□□□ 1.37
CDC42BPB-208ENST00000561271 PCDH11YQ9BZA8 1340 aa23.63■■□□□ 1.37
CDC42BPB-208ENST00000561271 PRIM1P49642 420 aaKnown RBP23.62■■□□□ 1.37
CDC42BPB-208ENST00000561271 PDGFDQ9GZP0 370 aaPredicted RBP23.62■■□□□ 1.37
CDC42BPB-208ENST00000561271 STK32BQ9NY57 414 aa23.62■■□□□ 1.37
CDC42BPB-208ENST00000561271 SLC15A2Q16348 729 aa23.59■■□□□ 1.37
CDC42BPB-208ENST00000561271 EYA1Q99502 592 aa23.59■■□□□ 1.37
CDC42BPB-208ENST00000561271 EIF4A2Q14240 407 aaKnown RBP23.58■■□□□ 1.37
CDC42BPB-208ENST00000561271 SPON1Q9HCB6 807 aa23.58■■□□□ 1.37
CDC42BPB-208ENST00000561271 LRRC4BQ9NT99 713 aa23.58■■□□□ 1.37
CDC42BPB-208ENST00000561271 KNSTRNQ9Y448 316 aa23.58■■□□□ 1.37
CDC42BPB-208ENST00000561271 COL24A1Q17RW2 1714 aa23.58■■□□□ 1.37
CDC42BPB-208ENST00000561271 CYP27B1O15528 508 aa23.56■■□□□ 1.36
CDC42BPB-208ENST00000561271 ZNF827Q17R98 1081 aa23.56■■□□□ 1.36
CDC42BPB-208ENST00000561271 MORC1Q86VD1 984 aa23.56■■□□□ 1.36
CDC42BPB-208ENST00000561271 ZBTB7AO95365 584 aa23.54■■□□□ 1.36
CDC42BPB-208ENST00000561271 KCNQ4P56696 695 aa23.54■■□□□ 1.36
CDC42BPB-208ENST00000561271 AMER1Q5JTC6 1135 aaPredicted RBP23.53■■□□□ 1.36
CDC42BPB-208ENST00000561271 UBR3Q6ZT12 1888 aa23.53■■□□□ 1.36
CDC42BPB-208ENST00000561271 IGSF1Q8N6C5 1336 aa23.53■■□□□ 1.36
CDC42BPB-208ENST00000561271 SCN11AQ9UI33 1791 aa23.52■■□□□ 1.36
CDC42BPB-208ENST00000561271 SLC27A3Q5K4L6 730 aa23.52■■□□□ 1.36
CDC42BPB-208ENST00000561271 PPP1R1BQ9UD71 204 aaPredicted RBP23.52■■□□□ 1.36
CDC42BPB-208ENST00000561271 C4BP0C0L5 1744 aa23.51■■□□□ 1.35
CDC42BPB-208ENST00000561271 SPG7Q9UQ90 795 aa23.5■■□□□ 1.35
CDC42BPB-208ENST00000561271 MPRIPQ6WCQ1 1025 aa23.48■■□□□ 1.35
CDC42BPB-208ENST00000561271 AKT1S1Q96B36 256 aa23.48■■□□□ 1.35
CDC42BPB-208ENST00000561271 CCNL1Q9UK58 526 aaPredicted RBP23.48■■□□□ 1.35
CDC42BPB-208ENST00000561271 ATF5Q9Y2D1 282 aaPredicted RBP23.48■■□□□ 1.35
CDC42BPB-208ENST00000561271 PALLDQ8WX93 1383 aa23.48■■□□□ 1.35
CDC42BPB-208ENST00000561271 PLEKHG2Q9H7P9 1386 aa23.47■■□□□ 1.35
CDC42BPB-208ENST00000561271 PTGER2P43116 358 aa23.46■■□□□ 1.35
CDC42BPB-208ENST00000561271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.46■■□□□ 1.352e-6■■□□□ 13
CDC42BPB-208ENST00000561271 MTFR1LQ9H019 292 aa23.45■■□□□ 1.34
CDC42BPB-208ENST00000561271 COL5A3P25940 1745 aaPredicted RBP23.45■■□□□ 1.34
CDC42BPB-208ENST00000561271 PNPLA7Q6ZV29 1317 aa23.44■■□□□ 1.34
CDC42BPB-208ENST00000561271 PER1O15534 1290 aaPredicted RBP23.44■■□□□ 1.34
CDC42BPB-208ENST00000561271 PHKG2P15735 406 aa23.44■■□□□ 1.34
CDC42BPB-208ENST00000561271 NKX1-1Q15270 411 aaPredicted RBP23.44■■□□□ 1.34
CDC42BPB-208ENST00000561271 CC2D1BQ5T0F9 858 aaKnown RBP23.44■■□□□ 1.34
CDC42BPB-208ENST00000561271 AEBP1Q8IUX7 1158 aa23.44■■□□□ 1.34
CDC42BPB-208ENST00000561271 IFNL2Q8IZJ0 200 aa23.42■■□□□ 1.34
CDC42BPB-208ENST00000561271 ZNF831Q5JPB2 1677 aa23.41■■□□□ 1.34
CDC42BPB-208ENST00000561271 TFCP2L1Q9NZI6 479 aa23.41■■□□□ 1.34
CDC42BPB-208ENST00000561271 KDRP35968 1356 aa23.4■■□□□ 1.34
CDC42BPB-208ENST00000561271 PIGBQ92521 554 aa23.4■■□□□ 1.34
CDC42BPB-208ENST00000561271 SGIP1Q9BQI5 828 aa23.4■■□□□ 1.34
CDC42BPB-208ENST00000561271 KDM6AO15550 1401 aaPredicted RBP23.4■■□□□ 1.34
CDC42BPB-208ENST00000561271 CHD4Q14839 1912 aa23.39■■□□□ 1.34
CDC42BPB-208ENST00000561271 COL3A1P02461 1466 aaPredicted RBP23.39■■□□□ 1.34
CDC42BPB-208ENST00000561271 CNGB1Q14028 1251 aaPredicted RBP23.39■■□□□ 1.33
CDC42BPB-208ENST00000561271 TMOD3Q9NYL9 352 aa23.39■■□□□ 1.33
CDC42BPB-208ENST00000561271 IL13P35225 146 aa23.38■■□□□ 1.33
CDC42BPB-208ENST00000561271 MTHFSP49914 203 aa23.38■■□□□ 1.33
CDC42BPB-208ENST00000561271 NPC1L1Q9UHC9 1359 aa23.38■■□□□ 1.33
CDC42BPB-208ENST00000561271 SULT6B1Q6IMI4 303 aa23.37■■□□□ 1.33
CDC42BPB-208ENST00000561271 ZNF530Q6P9A1 599 aaPredicted RBP23.37■■□□□ 1.33
CDC42BPB-208ENST00000561271 SMARCC1Q92922 1105 aaPredicted RBP23.37■■□□□ 1.33
CDC42BPB-208ENST00000561271 MYH14Q7Z406 1995 aaKnown RBP23.36■■□□□ 1.33
CDC42BPB-208ENST00000561271 PLEKHO1Q53GL0 409 aaPredicted RBP23.36■■□□□ 1.33
CDC42BPB-208ENST00000561271 TJP1Q07157 1748 aa23.35■■□□□ 1.33
CDC42BPB-208ENST00000561271 C4AP0C0L4 1744 aa23.34■■□□□ 1.33
CDC42BPB-208ENST00000561271 ADAMTS7Q9UKP4 1686 aa23.34■■□□□ 1.33
CDC42BPB-208ENST00000561271 FHDC1Q9C0D6 1143 aaPredicted RBP23.33■■□□□ 1.33
CDC42BPB-208ENST00000561271 ASAP1Q9ULH1 1129 aa23.33■■□□□ 1.33
CDC42BPB-208ENST00000561271 CICQ96RK0 1608 aaPredicted RBP23.33■■□□□ 1.32
CDC42BPB-208ENST00000561271 AMOTQ4VCS5 1084 aa23.32■■□□□ 1.32
CDC42BPB-208ENST00000561271 SLC16A10Q8TF71 515 aa23.32■■□□□ 1.32
CDC42BPB-208ENST00000561271 MSH5O43196 834 aa23.31■■□□□ 1.32
CDC42BPB-208ENST00000561271 HSP90AB1P08238 724 aaKnown RBP23.31■■□□□ 1.32
CDC42BPB-208ENST00000561271 COL23A1Q86Y22 540 aaPredicted RBP23.31■■□□□ 1.32
CDC42BPB-208ENST00000561271 ARXQ96QS3 562 aa23.31■■□□□ 1.32
CDC42BPB-208ENST00000561271 SIPA1L3O60292 1781 aaPredicted RBP23.3■■□□□ 1.32
CDC42BPB-208ENST00000561271 LOC102724428A0A0B4J2F2 783 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms