RNA–Protein interactions for RNA: ENST00000561255.5

CRTC3-213, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 5

Gene CRTC3, Length 520 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-213ENST00000561255 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
CRTC3-213ENST00000561255 EDC4Q6P2E9 1401 aaKnown RBP17.2■□□□□ 0.34
CRTC3-213ENST00000561255 HDGFL2Q7Z4V5 671 aaPredicted RBP17.19■□□□□ 0.34
CRTC3-213ENST00000561255 COL23A1Q86Y22 540 aaPredicted RBP17.19■□□□□ 0.34
CRTC3-213ENST00000561255 CCNL1Q9UK58 526 aaPredicted RBP17.19■□□□□ 0.34
CRTC3-213ENST00000561255 HSPA6P17066 643 aa17.18■□□□□ 0.34
CRTC3-213ENST00000561255 GPBP1L1Q9HC44 474 aaPredicted RBP17.18■□□□□ 0.34
CRTC3-213ENST00000561255 CD2APQ9Y5K6 639 aa17.18■□□□□ 0.34
CRTC3-213ENST00000561255 ADCY9O60503 1353 aa17.17■□□□□ 0.34
CRTC3-213ENST00000561255 MSH5O43196 834 aa17.17■□□□□ 0.34
CRTC3-213ENST00000561255 ZCRB1Q8TBF4 217 aaKnown RBP17.16■□□□□ 0.34
CRTC3-213ENST00000561255 HMGB2P26583 209 aaKnown RBP17.15■□□□□ 0.34
CRTC3-213ENST00000561255 TMC1Q8TDI8 760 aa17.15■□□□□ 0.34
CRTC3-213ENST00000561255 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
CRTC3-213ENST00000561255 USP47Q96K76 1375 aa17.15■□□□□ 0.34
CRTC3-213ENST00000561255 SLC12A5Q9H2X9 1139 aa17.14■□□□□ 0.33
CRTC3-213ENST00000561255 TERF2IPQ9NYB0 399 aa17.14■□□□□ 0.33
CRTC3-213ENST00000561255 MSL1Q68DK7 614 aa17.13■□□□□ 0.33
CRTC3-213ENST00000561255 FLAD1Q8NFF5 587 aa17.13■□□□□ 0.33
CRTC3-213ENST00000561255 C5P01031 1676 aa17.13■□□□□ 0.33
CRTC3-213ENST00000561255 A0A1W2PP64 1363 aa17.13■□□□□ 0.33
CRTC3-213ENST00000561255 MEGF6O75095 1541 aa17.12■□□□□ 0.33
CRTC3-213ENST00000561255 HOXC9P31274 260 aa17.11■□□□□ 0.33
CRTC3-213ENST00000561255 PUS7Q96PZ0 661 aaKnown RBP17.11■□□□□ 0.33
CRTC3-213ENST00000561255 RGPD2P0DJD1 1756 aa17.1■□□□□ 0.33
CRTC3-213ENST00000561255 CGNL1Q0VF96 1302 aa17.1■□□□□ 0.33
CRTC3-213ENST00000561255 MAP3K19Q56UN5 1328 aa17.1■□□□□ 0.33
CRTC3-213ENST00000561255 ZNF526Q8TF50 670 aaPredicted RBP17.09■□□□□ 0.33
CRTC3-213ENST00000561255 TAF1LQ8IZX4 1826 aa17.09■□□□□ 0.33
CRTC3-213ENST00000561255 AMPHP49418 695 aa17.08■□□□□ 0.32
CRTC3-213ENST00000561255 SIN3AQ96ST3 1273 aa17.08■□□□□ 0.32
CRTC3-213ENST00000561255 COG3Q96JB2 828 aa17.07■□□□□ 0.32
CRTC3-213ENST00000561255 RTL1A6NKG5 1358 aa17.06■□□□□ 0.32
CRTC3-213ENST00000561255 IGSF1Q8N6C5 1336 aa17.06■□□□□ 0.32
CRTC3-213ENST00000561255 CARD11Q9BXL7 1154 aa17.06■□□□□ 0.32
CRTC3-213ENST00000561255 PALLDQ8WX93 1383 aa17.05■□□□□ 0.32
CRTC3-213ENST00000561255 KIF3CO14782 793 aa17.05■□□□□ 0.32
CRTC3-213ENST00000561255 NBPF6Q5VWK0 638 aa17.05■□□□□ 0.32
CRTC3-213ENST00000561255 NBPF4Q96M43 638 aa17.05■□□□□ 0.32
CRTC3-213ENST00000561255 C4BP0C0L5 1744 aa17.04■□□□□ 0.32
CRTC3-213ENST00000561255 RAPGEF4Q8WZA2 1011 aa17.04■□□□□ 0.32
CRTC3-213ENST00000561255 FBLN1P23142 703 aa17.03■□□□□ 0.32
CRTC3-213ENST00000561255 NEUROD1Q13562 356 aa17.03■□□□□ 0.32
CRTC3-213ENST00000561255 TOGARAM1Q9Y4F4 1720 aa17.03■□□□□ 0.32
CRTC3-213ENST00000561255 NSD3Q9BZ95 1437 aa17.03■□□□□ 0.32
CRTC3-213ENST00000561255 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
CRTC3-213ENST00000561255 PCDH11XQ9BZA7 1347 aa17.02■□□□□ 0.32
CRTC3-213ENST00000561255 PCDH11YQ9BZA8 1340 aa17.02■□□□□ 0.32
CRTC3-213ENST00000561255 UBR3Q6ZT12 1888 aa17.02■□□□□ 0.32
CRTC3-213ENST00000561255 TATP17735 454 aaPredicted RBP17.02■□□□□ 0.32
CRTC3-213ENST00000561255 APLP1P51693 650 aa17.02■□□□□ 0.32
CRTC3-213ENST00000561255 SMARCC1Q92922 1105 aaPredicted RBP17.02■□□□□ 0.32
CRTC3-213ENST00000561255 AK7Q96M32 723 aa17.02■□□□□ 0.32
CRTC3-213ENST00000561255 MPRIPQ6WCQ1 1025 aa17.01■□□□□ 0.31
CRTC3-213ENST00000561255 USHBP1Q8N6Y0 703 aa17.01■□□□□ 0.31
CRTC3-213ENST00000561255 SMG6Q86US8 1419 aaKnown RBP17.01■□□□□ 0.31
CRTC3-213ENST00000561255 AMIGO3Q86WK7 504 aa17■□□□□ 0.31
CRTC3-213ENST00000561255 ITGB4P16144 1822 aa16.99■□□□□ 0.31
CRTC3-213ENST00000561255 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.99■□□□□ 0.31
CRTC3-213ENST00000561255 SSFA2P28290 1259 aa16.99■□□□□ 0.31
CRTC3-213ENST00000561255 DNAJC5GQ8N7S2 189 aa16.99■□□□□ 0.31
CRTC3-213ENST00000561255 RRS1Q15050 365 aaKnown RBP16.98■□□□□ 0.31
CRTC3-213ENST00000561255 WWC3Q9ULE0 1092 aa16.98■□□□□ 0.31
CRTC3-213ENST00000561255 PCNTO95613 3336 aa16.98■□□□□ 0.31
CRTC3-213ENST00000561255 CYP27B1O15528 508 aa16.97■□□□□ 0.31
CRTC3-213ENST00000561255 TOMM70O94826 608 aa16.97■□□□□ 0.31
CRTC3-213ENST00000561255 PHF14O94880 888 aa16.97■□□□□ 0.31
CRTC3-213ENST00000561255 INSRP06213 1382 aa16.96■□□□□ 0.31
CRTC3-213ENST00000561255 MAP2P11137 1827 aaKnown RBP16.96■□□□□ 0.3
CRTC3-213ENST00000561255 KIF24Q5T7B8 1368 aa16.95■□□□□ 0.3
CRTC3-213ENST00000561255 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
CRTC3-213ENST00000561255 PIGBQ92521 554 aa16.95■□□□□ 0.3
CRTC3-213ENST00000561255 TESK2Q96S53 571 aa16.95■□□□□ 0.3
CRTC3-213ENST00000561255 KIF13BQ9NQT8 1826 aa16.95■□□□□ 0.3
CRTC3-213ENST00000561255 PKD1L3Q7Z443 1732 aa16.94■□□□□ 0.3
CRTC3-213ENST00000561255 FYB1O15117 783 aa16.94■□□□□ 0.3
CRTC3-213ENST00000561255 NKX1-1Q15270 411 aaPredicted RBP16.94■□□□□ 0.3
CRTC3-213ENST00000561255 SMIM5Q71RC9 77 aa16.94■□□□□ 0.3
CRTC3-213ENST00000561255 PXDNLA1KZ92 1463 aa16.93■□□□□ 0.3
CRTC3-213ENST00000561255 FLT4P35916 1363 aa16.93■□□□□ 0.3
CRTC3-213ENST00000561255 LOC102724428A0A0B4J2F2 783 aa16.93■□□□□ 0.3
CRTC3-213ENST00000561255 SIK1P57059 783 aa16.93■□□□□ 0.3
CRTC3-213ENST00000561255 HSP90AB2PQ58FF8 381 aa16.93■□□□□ 0.3
CRTC3-213ENST00000561255 LINC00116Q8NCU8 138 aa16.93■□□□□ 0.3
CRTC3-213ENST00000561255 KIAA1551Q9HCM1 1747 aa16.93■□□□□ 0.3
CRTC3-213ENST00000561255 TGFB2P61812 414 aa16.92■□□□□ 0.3
CRTC3-213ENST00000561255 MMP10P09238 476 aa16.91■□□□□ 0.3
CRTC3-213ENST00000561255 GGNBP2Q9H3C7 697 aa16.91■□□□□ 0.3
CRTC3-213ENST00000561255 WDR90Q96KV7 1748 aa16.9■□□□□ 0.3
CRTC3-213ENST00000561255 GNPATO15228 680 aa16.9■□□□□ 0.3
CRTC3-213ENST00000561255 NCAPD2Q15021 1401 aa16.89■□□□□ 0.29
CRTC3-213ENST00000561255 ST20-MTHFSA0A0A6YYL1 179 aa16.89■□□□□ 0.29
CRTC3-213ENST00000561255 RBM46Q8TBY0 533 aaKnown RBP16.89■□□□□ 0.29
CRTC3-213ENST00000561255 N4BP2Q86UW6 1770 aaPredicted RBP16.89■□□□□ 0.29
CRTC3-213ENST00000561255 ITPK1Q13572 414 aa16.88■□□□□ 0.29
CRTC3-213ENST00000561255 NMRK2Q9NPI5 230 aa16.88■□□□□ 0.29
CRTC3-213ENST00000561255 SPG7Q9UQ90 795 aa16.88■□□□□ 0.29
CRTC3-213ENST00000561255 BCS1LQ9Y276 419 aa16.88■□□□□ 0.29
CRTC3-213ENST00000561255 C10orf71Q711Q0 1435 aa16.87■□□□□ 0.29
CRTC3-213ENST00000561255 ATP6V1AP38606 617 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms