RNA–Protein interactions for RNA: ENST00000559328.5

MARK3-219, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 4

Gene MARK3, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-219ENST00000559328 DDB1Q16531 1140 aa27.44■■□□□ 1.98
MARK3-219ENST00000559328 CCDC184Q52MB2 194 aa27.44■■□□□ 1.98
MARK3-219ENST00000559328 TNS2Q63HR2 1409 aa27.43■■□□□ 1.98
MARK3-219ENST00000559328 EXOC5O00471 708 aa27.43■■□□□ 1.98
MARK3-219ENST00000559328 PDE3BQ13370 1112 aa27.4■■□□□ 1.98
MARK3-219ENST00000559328 ILDR2Q71H61 639 aa27.4■■□□□ 1.98
MARK3-219ENST00000559328 KRT27Q7Z3Y8 459 aa27.39■■□□□ 1.98
MARK3-219ENST00000559328 ZCRB1Q8TBF4 217 aaKnown RBP27.39■■□□□ 1.98
MARK3-219ENST00000559328 MRS2Q9HD23 443 aa27.39■■□□□ 1.98
MARK3-219ENST00000559328 PLEKHG2Q9H7P9 1386 aa27.38■■□□□ 1.97
MARK3-219ENST00000559328 RSPH6AQ9H0K4 717 aa27.37■■□□□ 1.97
MARK3-219ENST00000559328 WDR43Q15061 677 aaKnown RBP eCLIP27.36■■□□□ 1.97
MARK3-219ENST00000559328 FCHSD2O94868 740 aa27.35■■□□□ 1.97
MARK3-219ENST00000559328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.35■■□□□ 1.971e-6■■■□□ 17.3
MARK3-219ENST00000559328 SPG7Q9UQ90 795 aa27.35■■□□□ 1.97
MARK3-219ENST00000559328 PRKAR2BP31323 418 aa27.34■■□□□ 1.97
MARK3-219ENST00000559328 PLEKHO1Q53GL0 409 aaPredicted RBP27.34■■□□□ 1.97
MARK3-219ENST00000559328 MIER1Q8N108 512 aa27.33■■□□□ 1.97
MARK3-219ENST00000559328 MARCH10Q8NA82 808 aaPredicted RBP27.33■■□□□ 1.97
MARK3-219ENST00000559328 DDX54Q8TDD1 881 aaKnown RBP27.33■■□□□ 1.97
MARK3-219ENST00000559328 AMOTQ4VCS5 1084 aa27.32■■□□□ 1.96
MARK3-219ENST00000559328 FAM182BQ5T319 152 aa27.32■■□□□ 1.96
MARK3-219ENST00000559328 PCDH11XQ9BZA7 1347 aa27.32■■□□□ 1.96
MARK3-219ENST00000559328 PCDH11YQ9BZA8 1340 aa27.32■■□□□ 1.96
MARK3-219ENST00000559328 ADAMTS8Q9UP79 889 aa27.3■■□□□ 1.96
MARK3-219ENST00000559328 SBF2Q86WG5 1849 aa27.3■■□□□ 1.96
MARK3-219ENST00000559328 CCER2I3L3R5 266 aa27.29■■□□□ 1.96
MARK3-219ENST00000559328 PNISRQ8TF01 805 aaKnown RBP27.29■■□□□ 1.96
MARK3-219ENST00000559328 KAT6BQ8WYB5 2073 aa27.29■■□□□ 1.96
MARK3-219ENST00000559328 CYP27B1O15528 508 aa27.28■■□□□ 1.96
MARK3-219ENST00000559328 PNNQ9H307 717 aaKnown RBP27.28■■□□□ 1.96
MARK3-219ENST00000559328 VIRMAQ69YN4 1812 aaKnown RBP27.27■■□□□ 1.96
MARK3-219ENST00000559328 ZNF530Q6P9A1 599 aaPredicted RBP27.27■■□□□ 1.96
MARK3-219ENST00000559328 PHACTR3Q96KR7 559 aa27.27■■□□□ 1.96
MARK3-219ENST00000559328 MTHFSDQ2M296 383 aaKnown RBP27.26■■□□□ 1.95
MARK3-219ENST00000559328 PLEKHF1Q96S99 279 aa27.26■■□□□ 1.95
MARK3-219ENST00000559328 PHKG2P15735 406 aa27.25■■□□□ 1.95
MARK3-219ENST00000559328 FAM196AQ6ZSG2 479 aa27.25■■□□□ 1.95
MARK3-219ENST00000559328 IFNL2Q8IZJ0 200 aa27.25■■□□□ 1.95
MARK3-219ENST00000559328 DOT1LQ8TEK3 1739 aa27.24■■□□□ 1.95
MARK3-219ENST00000559328 DLG5Q8TDM6 1919 aa27.24■■□□□ 1.95
MARK3-219ENST00000559328 NEFMP07197 916 aa27.24■■□□□ 1.95
MARK3-219ENST00000559328 BCL9O00512 1426 aa27.23■■□□□ 1.95
MARK3-219ENST00000559328 C1orf141Q5JVX7 400 aa27.22■■□□□ 1.95
MARK3-219ENST00000559328 CCDC146Q8IYE0 955 aa27.22■■□□□ 1.95
MARK3-219ENST00000559328 GAS2L2Q8NHY3 880 aa27.22■■□□□ 1.95
MARK3-219ENST00000559328 TOGARAM1Q9Y4F4 1720 aa27.21■■□□□ 1.95
MARK3-219ENST00000559328 MAPK8IP3Q9UPT6 1336 aa27.21■■□□□ 1.95
MARK3-219ENST00000559328 SCN11AQ9UI33 1791 aa27.2■■□□□ 1.95
MARK3-219ENST00000559328 NKX1-1Q15270 411 aaPredicted RBP27.2■■□□□ 1.94
MARK3-219ENST00000559328 AKAP4Q5JQC9 854 aa27.2■■□□□ 1.94
MARK3-219ENST00000559328 RUNDC1Q96C34 613 aa27.2■■□□□ 1.94
MARK3-219ENST00000559328 ITGB4P16144 1822 aa27.19■■□□□ 1.94
MARK3-219ENST00000559328 NHSQ6T4R5 1651 aa27.19■■□□□ 1.94
MARK3-219ENST00000559328 FAM9BQ8IZU0 186 aa27.18■■□□□ 1.94
MARK3-219ENST00000559328 HSP90AB1P08238 724 aaKnown RBP27.17■■□□□ 1.94
MARK3-219ENST00000559328 ACSBG1Q96GR2 724 aa27.16■■□□□ 1.94
MARK3-219ENST00000559328 ADAMTS7Q9UKP4 1686 aa27.15■■□□□ 1.94
MARK3-219ENST00000559328 MAP3K5Q99683 1374 aa27.15■■□□□ 1.94
MARK3-219ENST00000559328 TNS1Q9HBL0 1735 aaKnown RBP27.15■■□□□ 1.94
MARK3-219ENST00000559328 KDM6AO15550 1401 aaPredicted RBP27.15■■□□□ 1.94
MARK3-219ENST00000559328 NFE2L2Q16236 605 aa27.14■■□□□ 1.94
MARK3-219ENST00000559328 MPRIPQ6WCQ1 1025 aa27.14■■□□□ 1.94
MARK3-219ENST00000559328 DCAF5Q96JK2 942 aa27.14■■□□□ 1.94
MARK3-219ENST00000559328 GNAT3A8MTJ3 354 aa27.13■■□□□ 1.93
MARK3-219ENST00000559328 TRIM37O94972 964 aa27.13■■□□□ 1.93
MARK3-219ENST00000559328 EP400Q96L91 3159 aa27.13■■□□□ 1.93
MARK3-219ENST00000559328 BTAF1O14981 1849 aa27.12■■□□□ 1.93
MARK3-219ENST00000559328 KCNQ2O43526 872 aa27.11■■□□□ 1.93
MARK3-219ENST00000559328 PRIM1P49642 420 aaKnown RBP27.11■■□□□ 1.93
MARK3-219ENST00000559328 RNMTO43148 476 aaKnown RBP27.1■■□□□ 1.93
MARK3-219ENST00000559328 TMPOP42166 694 aaKnown RBP27.1■■□□□ 1.93
MARK3-219ENST00000559328 SYTL4Q96C24 671 aaPredicted RBP27.1■■□□□ 1.93
MARK3-219ENST00000559328 LGR6Q9HBX8 967 aa27.1■■□□□ 1.93
MARK3-219ENST00000559328 PTF1AQ7RTS3 328 aa27.09■■□□□ 1.93
MARK3-219ENST00000559328 BCL11BQ9C0K0 894 aaPredicted RBP27.09■■□□□ 1.93
MARK3-219ENST00000559328 APAF1O14727 1248 aa27.08■■□□□ 1.93
MARK3-219ENST00000559328 UPF1Q92900 1129 aaKnown RBP eCLIP27.08■■□□□ 1.93
MARK3-219ENST00000559328 RRP7AQ9Y3A4 280 aaKnown RBP27.08■■□□□ 1.93
MARK3-219ENST00000559328 ERVV-2B6SEH9 535 aa27.07■■□□□ 1.92
MARK3-219ENST00000559328 RIPK4P57078 832 aa27.07■■□□□ 1.92
MARK3-219ENST00000559328 RTF1Q92541 710 aaKnown RBP27.07■■□□□ 1.92
MARK3-219ENST00000559328 HTATSF1O43719 755 aaKnown RBP27.06■■□□□ 1.92
MARK3-219ENST00000559328 NEUROD2Q15784 382 aa27.06■■□□□ 1.92
MARK3-219ENST00000559328 IL17REQ8NFR9 667 aa27.06■■□□□ 1.92
MARK3-219ENST00000559328 SIPA1L3O60292 1781 aaPredicted RBP27.06■■□□□ 1.92
MARK3-219ENST00000559328 CCDC125Q86Z20 511 aa27.05■■□□□ 1.92
MARK3-219ENST00000559328 MRC1P22897 1456 aa27.05■■□□□ 1.92
MARK3-219ENST00000559328 CABP4P57796 275 aa27.04■■□□□ 1.92
MARK3-219ENST00000559328 SF3B2Q13435 895 aaKnown RBP27.04■■□□□ 1.92
MARK3-219ENST00000559328 DCTN1Q14203 1278 aa27.03■■□□□ 1.92
MARK3-219ENST00000559328 MCM10Q7L590 875 aa27.03■■□□□ 1.92
MARK3-219ENST00000559328 TMOD3Q9NYL9 352 aa27.03■■□□□ 1.92
MARK3-219ENST00000559328 CEMIPQ8WUJ3 1361 aa27.02■■□□□ 1.92
MARK3-219ENST00000559328 APBA3O96018 575 aa27.01■■□□□ 1.91
MARK3-219ENST00000559328 LMOD3Q0VAK6 560 aa27.01■■□□□ 1.91
MARK3-219ENST00000559328 PIGBQ92521 554 aa27.01■■□□□ 1.91
MARK3-219ENST00000559328 SLC52A2Q9HAB3 445 aa27.01■■□□□ 1.91
MARK3-219ENST00000559328 SENP3-EIF4A1A0A087X0R7 540 aa27■■□□□ 1.91
MARK3-219ENST00000559328 NFATC2IPQ8NCF5 419 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms