RNA–Protein interactions for RNA: ENST00000558535.1

IDH3A-206, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 1 (best)

Gene IDH3A, Length 2,586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-206ENST00000558535 AMOTL2Q9Y2J4 779 aa7.97□□□□□ -1.13
IDH3A-206ENST00000558535 NRXN3Q9Y4C0 1643 aa7.97□□□□□ -1.13
IDH3A-206ENST00000558535 GOLGA6L6A8MZA4 724 aa7.97□□□□□ -1.13
IDH3A-206ENST00000558535 GOLGA6L22H0YM25 854 aa7.97□□□□□ -1.13
IDH3A-206ENST00000558535 UPF2Q9HAU5 1272 aaKnown RBP7.97□□□□□ -1.13
IDH3A-206ENST00000558535 R3HCC1Q9Y3T6 440 aaKnown RBP7.97□□□□□ -1.13
IDH3A-206ENST00000558535 MRVI1Q9Y6F6 885 aa7.97□□□□□ -1.13
IDH3A-206ENST00000558535 KIF1BO60333 1816 aa7.96□□□□□ -1.13
IDH3A-206ENST00000558535 E9PSI1 815 aa7.96□□□□□ -1.13
IDH3A-206ENST00000558535 HSP90AB1P08238 724 aaKnown RBP7.96□□□□□ -1.13
IDH3A-206ENST00000558535 SWT1Q5T5J6 900 aaKnown RBP7.96□□□□□ -1.13
IDH3A-206ENST00000558535 GOLGA6L1Q8N7Z2 621 aa7.96□□□□□ -1.13
IDH3A-206ENST00000558535 ADGRL3Q9HAR2 1447 aa7.96□□□□□ -1.13
IDH3A-206ENST00000558535 GUCY2CP25092 1073 aa7.96□□□□□ -1.14
IDH3A-206ENST00000558535 MAPK8IP2Q13387 824 aaPredicted RBP7.96□□□□□ -1.14
IDH3A-206ENST00000558535 ICE2Q659A1 982 aa7.96□□□□□ -1.14
IDH3A-206ENST00000558535 TSHZ1Q6ZSZ6 1077 aa7.96□□□□□ -1.14
IDH3A-206ENST00000558535 NGEFQ8N5V2 710 aa7.96□□□□□ -1.14
IDH3A-206ENST00000558535 ANKRD30BQ9BXX2 1392 aa7.96□□□□□ -1.14
IDH3A-206ENST00000558535 PTPRUQ92729 1446 aa7.95□□□□□ -1.14
IDH3A-206ENST00000558535 TRIM6-TRIM34B2RNG4 842 aa7.95□□□□□ -1.14
IDH3A-206ENST00000558535 PPP1R12AO14974 1030 aaPredicted RBP7.95□□□□□ -1.14
IDH3A-206ENST00000558535 TMC1Q8TDI8 760 aa7.95□□□□□ -1.14
IDH3A-206ENST00000558535 TRIM34Q9BYJ4 488 aa7.95□□□□□ -1.14
IDH3A-206ENST00000558535 HSPA5P11021 654 aaKnown RBP7.95□□□□□ -1.14
IDH3A-206ENST00000558535 MCM4P33991 863 aa7.94□□□□□ -1.14
IDH3A-206ENST00000558535 SEMA3FQ13275 785 aa7.94□□□□□ -1.14
IDH3A-206ENST00000558535 PHLPP1O60346 1717 aa7.94□□□□□ -1.14
IDH3A-206ENST00000558535 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.94□□□□□ -1.14
IDH3A-206ENST00000558535 MTA1Q13330 715 aa7.94□□□□□ -1.14
IDH3A-206ENST00000558535 CCDC91Q7Z6B0 441 aa7.94□□□□□ -1.14
IDH3A-206ENST00000558535 COL16A1Q07092 1604 aaPredicted RBP7.94□□□□□ -1.14
IDH3A-206ENST00000558535 SETD5Q9C0A6 1442 aa7.93□□□□□ -1.14
IDH3A-206ENST00000558535 HIRIP3Q9BW71 556 aaPredicted RBP7.93□□□□□ -1.14
IDH3A-206ENST00000558535 SHPRHQ149N8 1683 aa7.93□□□□□ -1.14
IDH3A-206ENST00000558535 KTN1Q86UP2 1357 aaKnown RBP7.93□□□□□ -1.14
IDH3A-206ENST00000558535 CCDC196A0A1B0GTZ2 297 aa7.93□□□□□ -1.14
IDH3A-206ENST00000558535 ANKRD23Q86SG2 305 aa7.93□□□□□ -1.14
IDH3A-206ENST00000558535 AEBP1Q8IUX7 1158 aa7.93□□□□□ -1.14
IDH3A-206ENST00000558535 MST1RQ04912 1400 aa7.93□□□□□ -1.14
IDH3A-206ENST00000558535 METP08581 1390 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 ASXL1Q8IXJ9 1541 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 CTAGE5O15320 804 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 ARID4AP29374 1257 aaPredicted RBP7.92□□□□□ -1.14
IDH3A-206ENST00000558535 NOP2P46087 812 aaKnown RBP7.92□□□□□ -1.14
IDH3A-206ENST00000558535 TDO2P48775 406 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 SIN3AQ96ST3 1273 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 PANK2Q9BZ23 570 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 TECPR2O15040 1411 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 LAMC1P11047 1609 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 LOC102724159A0A0B4J2E5 919 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 KLHL33A6NCF5 533 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 TRAK2O60296 914 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 PWP2Q15269 919 aaKnown RBP7.92□□□□□ -1.14
IDH3A-206ENST00000558535 ZNF772Q68DY9 489 aaPredicted RBP7.92□□□□□ -1.14
IDH3A-206ENST00000558535 SIRT1Q96EB6 747 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 RASSF4Q9H2L5 321 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 ZKSCAN5Q9Y2L8 839 aa7.92□□□□□ -1.14
IDH3A-206ENST00000558535 CBX1P83916 185 aa7.91□□□□□ -1.14
IDH3A-206ENST00000558535 SPATA31E1Q6ZUB1 1445 aa7.91□□□□□ -1.14
IDH3A-206ENST00000558535 BRINP3Q76B58 766 aa7.91□□□□□ -1.14
IDH3A-206ENST00000558535 JMYQ8N9B5 988 aa7.91□□□□□ -1.14
IDH3A-206ENST00000558535 LRRC59Q96AG4 307 aaKnown RBP7.91□□□□□ -1.14
IDH3A-206ENST00000558535 ANTXR1Q9H6X2 564 aa7.91□□□□□ -1.14
IDH3A-206ENST00000558535 CCDC39Q9UFE4 941 aa7.91□□□□□ -1.14
IDH3A-206ENST00000558535 PAXBP1Q9Y5B6 917 aa7.91□□□□□ -1.14
IDH3A-206ENST00000558535 PPLO60437 1756 aa7.9□□□□□ -1.14
IDH3A-206ENST00000558535 IRF6O14896 467 aa7.9□□□□□ -1.14
IDH3A-206ENST00000558535 NUTM2DQ5VT03 806 aaPredicted RBP7.9□□□□□ -1.14
IDH3A-206ENST00000558535 MPHOSPH9Q99550 1183 aa7.9□□□□□ -1.14
IDH3A-206ENST00000558535 NHSL1Q5SYE7 1610 aa7.9□□□□□ -1.14
IDH3A-206ENST00000558535 SETD1AO15047 1707 aaKnown RBP7.9□□□□□ -1.15
IDH3A-206ENST00000558535 MUM1L1Q5H9M0 696 aa7.9□□□□□ -1.15
IDH3A-206ENST00000558535 CT47A1Q5JQC4 288 aaPredicted RBP7.9□□□□□ -1.15
IDH3A-206ENST00000558535 RNF217Q8TC41 542 aa7.9□□□□□ -1.15
IDH3A-206ENST00000558535 MYOM2P54296 1465 aa7.9□□□□□ -1.15
IDH3A-206ENST00000558535 CDK12Q9NYV4 1490 aaPredicted RBP7.9□□□□□ -1.15
IDH3A-206ENST00000558535 CDC42BPGQ6DT37 1551 aa7.9□□□□□ -1.15
IDH3A-206ENST00000558535 CAPN2P17655 700 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 CCDC96Q2M329 555 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 C11orf91Q3C1V1 193 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 PDLIM2Q96JY6 352 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 DIAPH3Q9NSV4 1193 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 CHMP5Q9NZZ3 219 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 LRPPRCP42704 1394 aaKnown RBP7.89□□□□□ -1.15
IDH3A-206ENST00000558535 ABCC11Q96J66 1382 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 C1orf167Q5SNV9 1468 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 ZBTB7CA1YPR0 619 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 SLFN14P0C7P3 912 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 GSCP56915 257 aaPredicted RBP7.89□□□□□ -1.15
IDH3A-206ENST00000558535 PDE3BQ13370 1112 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 NOM1Q5C9Z4 860 aaKnown RBP7.89□□□□□ -1.15
IDH3A-206ENST00000558535 TBC1D22AQ8WUA7 517 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 TSPAN18Q96SJ8 248 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 NUB1Q9Y5A7 615 aa7.89□□□□□ -1.15
IDH3A-206ENST00000558535 DHX16O60231 1041 aaKnown RBP7.88□□□□□ -1.15
IDH3A-206ENST00000558535 TERF2Q15554 542 aa7.88□□□□□ -1.15
IDH3A-206ENST00000558535 RINLQ6ZS11 566 aa7.88□□□□□ -1.15
IDH3A-206ENST00000558535 ANKRD7Q92527 254 aa7.88□□□□□ -1.15
IDH3A-206ENST00000558535 RBM33Q96EV2 1170 aaKnown RBP7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms