RNA–Protein interactions for RNA: ENST00000558335.5

GABPB1-207, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-207ENST00000558335 FYB1O15117 783 aa6.76□□□□□ -1.33
GABPB1-207ENST00000558335 TRIM27P14373 513 aa6.76□□□□□ -1.33
GABPB1-207ENST00000558335 IDI1Q13907 227 aa6.76□□□□□ -1.33
GABPB1-207ENST00000558335 NBPF20Q3BBV1 942 aa6.76□□□□□ -1.33
GABPB1-207ENST00000558335 TMEM132EQ6IEE7 984 aa6.76□□□□□ -1.33
GABPB1-207ENST00000558335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.76□□□□□ -1.33
GABPB1-207ENST00000558335 CABP2Q9NPB3 220 aa6.76□□□□□ -1.33
GABPB1-207ENST00000558335 SPATA31D1Q6ZQQ2 1576 aa6.76□□□□□ -1.33
GABPB1-207ENST00000558335 MON2Q7Z3U7 1717 aa6.76□□□□□ -1.33
GABPB1-207ENST00000558335 CPSF1Q10570 1443 aaKnown RBP6.76□□□□□ -1.33
GABPB1-207ENST00000558335 HSP90AB1P08238 724 aaKnown RBP6.75□□□□□ -1.33
GABPB1-207ENST00000558335 MCM4P33991 863 aa6.75□□□□□ -1.33
GABPB1-207ENST00000558335 CHD1LQ86WJ1 897 aa6.75□□□□□ -1.33
GABPB1-207ENST00000558335 SSH1Q8WYL5 1049 aa6.75□□□□□ -1.33
GABPB1-207ENST00000558335 PRAM1Q96QH2 718 aa6.75□□□□□ -1.33
GABPB1-207ENST00000558335 TBC1D2Q9BYX2 928 aa6.75□□□□□ -1.33
GABPB1-207ENST00000558335 ANTXR1Q9H6X2 564 aa6.75□□□□□ -1.33
GABPB1-207ENST00000558335 NOB1Q9ULX3 412 aaKnown RBP6.75□□□□□ -1.33
GABPB1-207ENST00000558335 TRIM35Q9UPQ4 493 aa6.75□□□□□ -1.33
GABPB1-207ENST00000558335 RRP7AQ9Y3A4 280 aaKnown RBP6.75□□□□□ -1.33
GABPB1-207ENST00000558335 MAP2P11137 1827 aaKnown RBP6.75□□□□□ -1.33
GABPB1-207ENST00000558335 LRRC7Q96NW7 1537 aa6.75□□□□□ -1.33
GABPB1-207ENST00000558335 YEATS2Q9ULM3 1422 aa6.75□□□□□ -1.33
GABPB1-207ENST00000558335 PTPRCP08575 1304 aa6.75□□□□□ -1.33
GABPB1-207ENST00000558335 HMMRO75330 724 aa6.74□□□□□ -1.33
GABPB1-207ENST00000558335 NUCB2P80303 420 aa6.74□□□□□ -1.33
GABPB1-207ENST00000558335 RPAP2Q8IXW5 612 aaPredicted RBP6.74□□□□□ -1.33
GABPB1-207ENST00000558335 COG3Q96JB2 828 aa6.74□□□□□ -1.33
GABPB1-207ENST00000558335 ZNF830Q96NB3 372 aaPredicted RBP6.74□□□□□ -1.33
GABPB1-207ENST00000558335 CDK19Q9BWU1 502 aa6.74□□□□□ -1.33
GABPB1-207ENST00000558335 ESF1Q9H501 851 aaKnown RBP6.74□□□□□ -1.33
GABPB1-207ENST00000558335 CWC22Q9HCG8 908 aaKnown RBP6.74□□□□□ -1.33
GABPB1-207ENST00000558335 RRAGDQ9NQL2 400 aaPredicted RBP6.74□□□□□ -1.33
GABPB1-207ENST00000558335 AKAP12Q02952 1782 aa6.74□□□□□ -1.33
GABPB1-207ENST00000558335 TECPR2O15040 1411 aa6.74□□□□□ -1.33
GABPB1-207ENST00000558335 NCOA3Q9Y6Q9 1424 aa6.74□□□□□ -1.33
GABPB1-207ENST00000558335 CD163L1Q9NR16 1453 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 KIAA0232Q92628 1395 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 IBTKQ9P2D0 1353 aaPredicted RBP6.73□□□□□ -1.33
GABPB1-207ENST00000558335 EPB41L2O43491 1005 aaKnown RBP6.73□□□□□ -1.33
GABPB1-207ENST00000558335 CDC45O75419 566 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 RLBP1P12271 317 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 SLC4A3P48751 1232 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 MCM2P49736 904 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 RABEP1Q15276 862 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 CC2D2BQ6DHV5 1058 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 GGNBP2Q9H3C7 697 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 NRKQ7Z2Y5 1582 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 CACNA1FO60840 1977 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 TTC21BQ7Z4L5 1316 aa6.73□□□□□ -1.33
GABPB1-207ENST00000558335 CPS1P31327 1500 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 PATL2C9JE40 543 aaKnown RBP6.72□□□□□ -1.33
GABPB1-207ENST00000558335 TRAK2O60296 914 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 REC8O95072 547 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 MFAP1P55081 439 aaKnown RBP6.72□□□□□ -1.33
GABPB1-207ENST00000558335 INTS3Q68E01 1043 aaKnown RBP6.72□□□□□ -1.33
GABPB1-207ENST00000558335 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-207ENST00000558335 REM2Q8IYK8 340 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-207ENST00000558335 TMEM57Q8N5G2 664 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 SLKQ9H2G2 1235 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-207ENST00000558335 CCDC61Q9Y6R9 512 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 RIMS2Q9UQ26 1411 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 SETD1AO15047 1707 aaKnown RBP6.72□□□□□ -1.33
GABPB1-207ENST00000558335 ABCC4O15439 1325 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 MINK1Q8N4C8 1332 aaPredicted RBP6.72□□□□□ -1.33
GABPB1-207ENST00000558335 A2ML1A8K2U0 1454 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 RIMBP3CA6NJZ7 1639 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 RIMBP3BA6NNM3 1639 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 RIMBP3Q9UFD9 1639 aa6.72□□□□□ -1.33
GABPB1-207ENST00000558335 K7ELQ4 463 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-207ENST00000558335 WASLO00401 505 aaPredicted RBP6.71□□□□□ -1.34
GABPB1-207ENST00000558335 DYNC1I1O14576 645 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 HTATSF1O43719 755 aaKnown RBP6.71□□□□□ -1.34
GABPB1-207ENST00000558335 ST18O60284 1047 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 ZNF853P0CG23 659 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 PRKAR2BP31323 418 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 HSP90AB3PQ58FF7 597 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 CLEC17AQ6ZS10 378 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 MRPL50Q8N5N7 158 aaKnown RBP6.71□□□□□ -1.34
GABPB1-207ENST00000558335 ZNF592Q92610 1267 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 TSR2Q969E8 191 aaKnown RBP6.71□□□□□ -1.34
GABPB1-207ENST00000558335 BCL2L13Q9BXK5 485 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 EFCC1Q9HA90 598 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 RBM28Q9NW13 759 aaKnown RBP6.71□□□□□ -1.34
GABPB1-207ENST00000558335 BABAM1Q9NWV8 329 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 CABP1Q9NZU7 370 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 STK26Q9P289 416 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 C3P01024 1663 aa6.71□□□□□ -1.34
GABPB1-207ENST00000558335 ARHGEF10O15013 1369 aa6.7□□□□□ -1.34
GABPB1-207ENST00000558335 FSD2A1L4K1 749 aa6.7□□□□□ -1.34
GABPB1-207ENST00000558335 ZBTB7BO15156 539 aaPredicted RBP6.7□□□□□ -1.34
GABPB1-207ENST00000558335 MAFGO15525 162 aa6.7□□□□□ -1.34
GABPB1-207ENST00000558335 VAMP4O75379 141 aa6.7□□□□□ -1.34
GABPB1-207ENST00000558335 CALRP27797 417 aaKnown RBP6.7□□□□□ -1.34
GABPB1-207ENST00000558335 PSEN1P49768 467 aa6.7□□□□□ -1.34
GABPB1-207ENST00000558335 CCT4P50991 539 aaKnown RBP6.7□□□□□ -1.34
GABPB1-207ENST00000558335 TWISTNBQ3B726 338 aaPredicted RBP6.7□□□□□ -1.34
GABPB1-207ENST00000558335 ANKRD45Q5TZF3 282 aa6.7□□□□□ -1.34
GABPB1-207ENST00000558335 CTR9Q6PD62 1173 aa6.7□□□□□ -1.34
GABPB1-207ENST00000558335 CCDC94Q9BW85 323 aaPredicted RBP6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms