RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 SPINT1O43278 529 aa6.99□□□□□ -1.29
SPG11-206ENST00000558093 PTGIRP43119 386 aa6.99□□□□□ -1.29
SPG11-206ENST00000558093 USP4Q13107 963 aa6.99□□□□□ -1.29
SPG11-206ENST00000558093 MAP7D1Q3KQU3 841 aa6.99□□□□□ -1.29
SPG11-206ENST00000558093 PHTF2Q8N3S3 785 aa6.99□□□□□ -1.29
SPG11-206ENST00000558093 TTLL8A6PVC2 850 aa6.98□□□□□ -1.29
SPG11-206ENST00000558093 MEN1O00255 615 aa6.98□□□□□ -1.29
SPG11-206ENST00000558093 ADAMTS19Q8TE59 1207 aa6.98□□□□□ -1.29
SPG11-206ENST00000558093 INSM2Q96T92 566 aaPredicted RBP6.98□□□□□ -1.29
SPG11-206ENST00000558093 SOBPA7XYQ1 873 aa6.97□□□□□ -1.29
SPG11-206ENST00000558093 TRAK2O60296 914 aa6.97□□□□□ -1.29
SPG11-206ENST00000558093 EML3Q32P44 896 aa6.97□□□□□ -1.29
SPG11-206ENST00000558093 TSGA10IPQ3SY00 556 aa6.97□□□□□ -1.29
SPG11-206ENST00000558093 C14orf37Q86TY3 774 aa6.97□□□□□ -1.29
SPG11-206ENST00000558093 NLRP3Q96P20 1036 aa6.97□□□□□ -1.29
SPG11-206ENST00000558093 OSBPL3Q9H4L5 887 aa6.97□□□□□ -1.29
SPG11-206ENST00000558093 ARHGEF10LQ9HCE6 1279 aa6.97□□□□□ -1.29
SPG11-206ENST00000558093 SOS2Q07890 1332 aaPredicted RBP6.97□□□□□ -1.29
SPG11-206ENST00000558093 FIGNL2A6NMB9 653 aa6.96□□□□□ -1.3
SPG11-206ENST00000558093 USP17L5A8MUK1 530 aa6.96□□□□□ -1.3
SPG11-206ENST00000558093 CTSOP43234 321 aaPredicted RBP6.96□□□□□ -1.3
SPG11-206ENST00000558093 NFATC2IPQ8NCF5 419 aa6.96□□□□□ -1.3
SPG11-206ENST00000558093 ZMYND15Q9H091 742 aa6.96□□□□□ -1.3
SPG11-206ENST00000558093 RAB6BQ9NRW1 208 aa6.96□□□□□ -1.3
SPG11-206ENST00000558093 ZNF777Q9ULD5 760 aaPredicted RBP6.96□□□□□ -1.3
SPG11-206ENST00000558093 A0A1W2PRU2 124 aa6.95□□□□□ -1.3
SPG11-206ENST00000558093 PSME1Q06323 249 aa6.95□□□□□ -1.3
SPG11-206ENST00000558093 NCOA4Q13772 614 aa6.95□□□□□ -1.3
SPG11-206ENST00000558093 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.95□□□□□ -1.3
SPG11-206ENST00000558093 DEPDC4Q8N2C3 294 aa6.95□□□□□ -1.3
SPG11-206ENST00000558093 DNMT3LQ9UJW3 386 aa6.95□□□□□ -1.3
SPG11-206ENST00000558093 CHIC2Q9UKJ5 165 aa6.95□□□□□ -1.3
SPG11-206ENST00000558093 GNRH1P01148 92 aa6.94□□□□□ -1.3
SPG11-206ENST00000558093 ESCO1Q5FWF5 840 aa6.94□□□□□ -1.3
SPG11-206ENST00000558093 SLC27A3Q5K4L6 730 aa6.94□□□□□ -1.3
SPG11-206ENST00000558093 KDF1Q8NAX2 398 aaPredicted RBP6.94□□□□□ -1.3
SPG11-206ENST00000558093 UCN2Q96RP3 112 aa6.94□□□□□ -1.3
SPG11-206ENST00000558093 NOD1Q9Y239 953 aa6.94□□□□□ -1.3
SPG11-206ENST00000558093 USP17L3A6NCW0 530 aa6.93□□□□□ -1.3
SPG11-206ENST00000558093 USP17L4A6NCW7 530 aa6.93□□□□□ -1.3
SPG11-206ENST00000558093 ATP9BO43861 1147 aa6.93□□□□□ -1.3
SPG11-206ENST00000558093 LZTS3O60299 673 aaPredicted RBP6.93□□□□□ -1.3
SPG11-206ENST00000558093 CLN3Q13286 438 aa6.93□□□□□ -1.3
SPG11-206ENST00000558093 USP17L2Q6R6M4 530 aa6.93□□□□□ -1.3
SPG11-206ENST00000558093 TBC1D9Q6ZT07 1266 aa6.93□□□□□ -1.3
SPG11-206ENST00000558093 USP17L1Q7RTZ2 530 aa6.93□□□□□ -1.3
SPG11-206ENST00000558093 GTF2E1P29083 439 aaPredicted RBP6.92□□□□□ -1.3
SPG11-206ENST00000558093 FOXD4L5Q5VV16 416 aaPredicted RBP6.92□□□□□ -1.3
SPG11-206ENST00000558093 RNF217Q8TC41 542 aa6.92□□□□□ -1.3
SPG11-206ENST00000558093 GTF2IP78347 998 aa6.91□□□□□ -1.3
SPG11-206ENST00000558093 LYSMD3Q7Z3D4 306 aa6.91□□□□□ -1.3
SPG11-206ENST00000558093 TRIM50Q86XT4 487 aa6.91□□□□□ -1.3
SPG11-206ENST00000558093 CNKSR1Q969H4 720 aa6.91□□□□□ -1.3
SPG11-206ENST00000558093 ZNF775Q96BV0 537 aaPredicted RBP6.91□□□□□ -1.3
SPG11-206ENST00000558093 GPC1P35052 558 aa6.9□□□□□ -1.3
SPG11-206ENST00000558093 RNF144AP50876 292 aaPredicted RBP6.9□□□□□ -1.3
SPG11-206ENST00000558093 GDF10P55107 478 aa6.9□□□□□ -1.3
SPG11-206ENST00000558093 PRICKLE2Q7Z3G6 844 aa6.9□□□□□ -1.3
SPG11-206ENST00000558093 PLEKHM2Q8IWE5 1019 aa6.9□□□□□ -1.3
SPG11-206ENST00000558093 ESYT1Q9BSJ8 1104 aa6.9□□□□□ -1.3
SPG11-206ENST00000558093 TFIP11Q9UBB9 837 aaKnown RBP6.9□□□□□ -1.3
SPG11-206ENST00000558093 NXF1Q9UBU9 619 aaKnown RBP6.9□□□□□ -1.3
SPG11-206ENST00000558093 PALM3A6NDB9 673 aaPredicted RBP6.89□□□□□ -1.31
SPG11-206ENST00000558093 STAU1O95793 577 aaKnown RBP6.89□□□□□ -1.31
SPG11-206ENST00000558093 IL2RAP01589 272 aa6.89□□□□□ -1.31
SPG11-206ENST00000558093 ATP1A2P50993 1020 aa6.89□□□□□ -1.31
SPG11-206ENST00000558093 PTSQ03393 145 aa6.89□□□□□ -1.31
SPG11-206ENST00000558093 TLR1Q15399 786 aa6.89□□□□□ -1.31
SPG11-206ENST00000558093 SLC16A10Q8TF71 515 aa6.89□□□□□ -1.31
SPG11-206ENST00000558093 PPP1R12CQ9BZL4 782 aa6.89□□□□□ -1.31
SPG11-206ENST00000558093 ETNK1Q9HBU6 452 aa6.89□□□□□ -1.31
SPG11-206ENST00000558093 RBM19Q9Y4C8 960 aaKnown RBP6.89□□□□□ -1.31
SPG11-206ENST00000558093 MAFBQ9Y5Q3 323 aaPredicted RBP6.89□□□□□ -1.31
SPG11-206ENST00000558093 TERTO14746 1132 aaKnown RBP6.88□□□□□ -1.31
SPG11-206ENST00000558093 RHOQP17081 205 aa6.88□□□□□ -1.31
SPG11-206ENST00000558093 VEGFBP49765 207 aa6.88□□□□□ -1.31
SPG11-206ENST00000558093 TMEM214Q6NUQ4 689 aaKnown RBP6.88□□□□□ -1.31
SPG11-206ENST00000558093 ERICH6Q7L0X2 663 aa6.88□□□□□ -1.31
SPG11-206ENST00000558093 CCDC97Q96F63 343 aaPredicted RBP6.88□□□□□ -1.31
SPG11-206ENST00000558093 ZSCAN10Q96SZ4 725 aaPredicted RBP6.88□□□□□ -1.31
SPG11-206ENST00000558093 MKRN1Q9UHC7 482 aaKnown RBP6.88□□□□□ -1.31
SPG11-206ENST00000558093 LMOD1P29536 600 aaPredicted RBP6.87□□□□□ -1.31
SPG11-206ENST00000558093 SCNN1DP51172 638 aa6.87□□□□□ -1.31
SPG11-206ENST00000558093 CENPCQ03188 943 aa6.87□□□□□ -1.31
SPG11-206ENST00000558093 GNASQ5JWF2 1037 aa6.87□□□□□ -1.31
SPG11-206ENST00000558093 SERTAD1Q9UHV2 236 aa6.87□□□□□ -1.31
SPG11-206ENST00000558093 ARID3CA6NKF2 412 aa6.86□□□□□ -1.31
SPG11-206ENST00000558093 WFS1O76024 890 aa6.86□□□□□ -1.31
SPG11-206ENST00000558093 INHAP05111 366 aa6.86□□□□□ -1.31
SPG11-206ENST00000558093 NPAS3Q8IXF0 933 aa6.86□□□□□ -1.31
SPG11-206ENST00000558093 OGFOD1Q8N543 542 aa6.86□□□□□ -1.31
SPG11-206ENST00000558093 TPCN2Q8NHX9 752 aa6.86□□□□□ -1.31
SPG11-206ENST00000558093 XAGE2Q96GT9 111 aa6.86□□□□□ -1.31
SPG11-206ENST00000558093 ZNF594Q96JF6 807 aaPredicted RBP6.86□□□□□ -1.31
SPG11-206ENST00000558093 DNAAF2Q9NVR5 837 aaKnown RBP6.86□□□□□ -1.31
SPG11-206ENST00000558093 PCDHGA11Q9Y5H2 935 aa6.86□□□□□ -1.31
SPG11-206ENST00000558093 BACH1O14867 736 aa6.85□□□□□ -1.31
SPG11-206ENST00000558093 PPFIA3O75145 1194 aa6.85□□□□□ -1.31
SPG11-206ENST00000558093 RASA1P20936 1047 aa6.85□□□□□ -1.31
SPG11-206ENST00000558093 POU4F2Q12837 409 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms